RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 FAM90A27PA6NNH2 459 aa6.77□□□□□ -1.33
GABPB1-205ENST00000429662 FABP5P3A8MUU1 101 aa6.77□□□□□ -1.33
GABPB1-205ENST00000429662 CCL25O15444 150 aa6.77□□□□□ -1.33
GABPB1-205ENST00000429662 HBDP02042 147 aa6.77□□□□□ -1.33
GABPB1-205ENST00000429662 FAM106CPP0CH98 169 aa6.77□□□□□ -1.33
GABPB1-205ENST00000429662 CD24P25063 80 aa6.77□□□□□ -1.33
GABPB1-205ENST00000429662 KRTAP1-1Q07627 177 aa6.77□□□□□ -1.33
GABPB1-205ENST00000429662 VAMP3Q15836 100 aa6.77□□□□□ -1.33
GABPB1-205ENST00000429662 MPV17L2Q567V2 206 aa6.77□□□□□ -1.33
GABPB1-205ENST00000429662 VMO1Q7Z5L0 202 aa6.77□□□□□ -1.33
GABPB1-205ENST00000429662 FER1L6-AS1Q8NA97 138 aa6.77□□□□□ -1.33
GABPB1-205ENST00000429662 OR4C5Q8NGB2 326 aa6.77□□□□□ -1.33
GABPB1-205ENST00000429662 OR9G4Q8NGQ1 327 aa6.77□□□□□ -1.33
GABPB1-205ENST00000429662 FAM110DQ8TAY7 271 aaPredicted RBP6.77□□□□□ -1.33
GABPB1-205ENST00000429662 PIFOQ8TCI5 191 aa6.77□□□□□ -1.33
GABPB1-205ENST00000429662 MRPL53Q96EL3 112 aaKnown RBP6.77□□□□□ -1.33
GABPB1-205ENST00000429662 C8orf49Q96NF6 230 aa6.77□□□□□ -1.33
GABPB1-205ENST00000429662 ASCL2Q99929 193 aa6.77□□□□□ -1.33
GABPB1-205ENST00000429662 CNFNQ9BYD5 112 aa6.77□□□□□ -1.33
GABPB1-205ENST00000429662 HIF1ANQ9NWT6 349 aa6.77□□□□□ -1.33
GABPB1-205ENST00000429662 SIGLEC8Q9NYZ4 499 aa6.77□□□□□ -1.33
GABPB1-205ENST00000429662 PLCE1Q9P212 2302 aa6.77□□□□□ -1.33
GABPB1-205ENST00000429662 MGAM2Q2M2H8 2515 aa6.77□□□□□ -1.33
GABPB1-205ENST00000429662 NCBP2LA6PVI3 153 aaKnown RBP6.76□□□□□ -1.33
GABPB1-205ENST00000429662 D6R8Y8 96 aa6.76□□□□□ -1.33
GABPB1-205ENST00000429662 F8W735 103 aaPredicted RBP6.76□□□□□ -1.33
GABPB1-205ENST00000429662 M0R3E3 92 aa6.76□□□□□ -1.33
GABPB1-205ENST00000429662 TAX1BP3O14907 124 aa6.76□□□□□ -1.33
GABPB1-205ENST00000429662 GOSR1O95249 250 aa6.76□□□□□ -1.33
GABPB1-205ENST00000429662 IGLC6P0CF74 106 aa6.76□□□□□ -1.33
GABPB1-205ENST00000429662 TMEM11P17152 192 aa6.76□□□□□ -1.33
GABPB1-205ENST00000429662 CKS2P33552 79 aa6.76□□□□□ -1.33
GABPB1-205ENST00000429662 IFI27P40305 119 aaPredicted RBP6.76□□□□□ -1.33
GABPB1-205ENST00000429662 ZNF138P52744 262 aa6.76□□□□□ -1.33
GABPB1-205ENST00000429662 DLX1P56177 255 aa6.76□□□□□ -1.33
GABPB1-205ENST00000429662 MRPL51Q4U2R6 128 aaKnown RBP6.76□□□□□ -1.33
GABPB1-205ENST00000429662 LDLRAD2Q5SZI1 272 aa6.76□□□□□ -1.33
GABPB1-205ENST00000429662 C11orf71Q6IPW1 123 aa6.76□□□□□ -1.33
GABPB1-205ENST00000429662 OR4X2Q8NGF9 303 aa6.76□□□□□ -1.33
GABPB1-205ENST00000429662 TPPP3Q9BW30 176 aa6.76□□□□□ -1.33
GABPB1-205ENST00000429662 MAP1LC3AQ9H492 121 aa6.76□□□□□ -1.33
GABPB1-205ENST00000429662 NXT2Q9NPJ8 142 aaKnown RBP6.76□□□□□ -1.33
GABPB1-205ENST00000429662 PEF1Q9UBV8 284 aaKnown RBP6.76□□□□□ -1.33
GABPB1-205ENST00000429662 NBEAL2Q6ZNJ1 2754 aa6.75□□□□□ -1.33
GABPB1-205ENST00000429662 TRRAPQ9Y4A5 3859 aa6.75□□□□□ -1.33
GABPB1-205ENST00000429662 A6NDN8 102 aa6.75□□□□□ -1.33
GABPB1-205ENST00000429662 CTSGP08311 255 aa6.75□□□□□ -1.33
GABPB1-205ENST00000429662 TWIST1Q15672 202 aa6.75□□□□□ -1.33
GABPB1-205ENST00000429662 DTX2Q86UW9 622 aa6.75□□□□□ -1.33
GABPB1-205ENST00000429662 KRTAP19-1Q8IUB9 90 aa6.75□□□□□ -1.33
GABPB1-205ENST00000429662 SMPXQ9UHP9 88 aa6.75□□□□□ -1.33
GABPB1-205ENST00000429662 IGHV7-81A0A0B4J1V7 117 aa6.74□□□□□ -1.33
GABPB1-205ENST00000429662 EGR2P11161 476 aaPredicted RBP6.74□□□□□ -1.33
GABPB1-205ENST00000429662 PRB3Q04118 309 aaPredicted RBP6.74□□□□□ -1.33
GABPB1-205ENST00000429662 HSD52Q0P140 79 aa6.74□□□□□ -1.33
GABPB1-205ENST00000429662 DEFB113Q30KQ7 82 aa6.74□□□□□ -1.33
GABPB1-205ENST00000429662 TMEM97Q5BJF2 176 aa6.74□□□□□ -1.33
GABPB1-205ENST00000429662 KLF17Q5JT82 389 aaPredicted RBP6.74□□□□□ -1.33
GABPB1-205ENST00000429662 SMIM15Q7Z3B0 74 aa6.74□□□□□ -1.33
GABPB1-205ENST00000429662 AMN1Q8IY45 258 aa6.74□□□□□ -1.33
GABPB1-205ENST00000429662 BOD1L2Q8IYS8 172 aa6.74□□□□□ -1.33
GABPB1-205ENST00000429662 ZNF502Q8TBZ5 544 aa6.74□□□□□ -1.33
GABPB1-205ENST00000429662 IFI27L1Q96BM0 104 aa6.74□□□□□ -1.33
GABPB1-205ENST00000429662 IGKV2-40A0A087WW87 121 aaPredicted RBP6.73□□□□□ -1.33
GABPB1-205ENST00000429662 A0A096LNJ9 63 aa6.73□□□□□ -1.33
GABPB1-205ENST00000429662 TRBV7-1A0A0A6YYK4 115 aa6.73□□□□□ -1.33
GABPB1-205ENST00000429662 MUC21A0A0G2JKD1 596 aa6.73□□□□□ -1.33
GABPB1-205ENST00000429662 MUC21A0A140T8X8 626 aa6.73□□□□□ -1.33
GABPB1-205ENST00000429662 LOC389332A0A1B0GUA5 103 aa6.73□□□□□ -1.33
GABPB1-205ENST00000429662 TMEM213A2RRL7 107 aa6.73□□□□□ -1.33
GABPB1-205ENST00000429662 H0Y8G0 127 aa6.73□□□□□ -1.33
GABPB1-205ENST00000429662 H3BRM9 83 aa6.73□□□□□ -1.33
GABPB1-205ENST00000429662 IGKV2D-40P01614 121 aaPredicted RBP6.73□□□□□ -1.33
GABPB1-205ENST00000429662 FCER1GP30273 86 aa6.73□□□□□ -1.33
GABPB1-205ENST00000429662 CDKN1BP46527 198 aa6.73□□□□□ -1.33
GABPB1-205ENST00000429662 UBE2E1P51965 193 aa6.73□□□□□ -1.33
GABPB1-205ENST00000429662 PAX8Q06710 450 aa6.73□□□□□ -1.33
GABPB1-205ENST00000429662 KLRD1Q13241 179 aa6.73□□□□□ -1.33
GABPB1-205ENST00000429662 MUC21Q5SSG8 566 aa6.73□□□□□ -1.33
GABPB1-205ENST00000429662 Q8N9W7 124 aa6.73□□□□□ -1.33
GABPB1-205ENST00000429662 OR8A1Q8NGG7 326 aa6.73□□□□□ -1.33
GABPB1-205ENST00000429662 EEF1AKMT3Q96AZ1 226 aa6.73□□□□□ -1.33
GABPB1-205ENST00000429662 AP1S3Q96PC3 154 aa6.73□□□□□ -1.33
GABPB1-205ENST00000429662 KRTAP9-9Q9BYP9 154 aa6.73□□□□□ -1.33
GABPB1-205ENST00000429662 KRTAP9-4Q9BYQ2 154 aa6.73□□□□□ -1.33
GABPB1-205ENST00000429662 SMAD5-AS1Q9Y6J3 95 aa6.73□□□□□ -1.33
GABPB1-205ENST00000429662 CR1P17927 2039 aa6.73□□□□□ -1.33
GABPB1-205ENST00000429662 TMSB15BA0A087X1C1 80 aa6.72□□□□□ -1.33
GABPB1-205ENST00000429662 A0A1W2PPR1 153 aa6.72□□□□□ -1.33
GABPB1-205ENST00000429662 A0A1W2PRD5 423 aa6.72□□□□□ -1.33
GABPB1-205ENST00000429662 A0A1W2PRF3 423 aa6.72□□□□□ -1.33
GABPB1-205ENST00000429662 A0A1W2PRM7 423 aa6.72□□□□□ -1.33
GABPB1-205ENST00000429662 OR2T8A6NH00 312 aa6.72□□□□□ -1.33
GABPB1-205ENST00000429662 PRSS47A8MTI9 375 aa6.72□□□□□ -1.33
GABPB1-205ENST00000429662 SMAD7O15105 426 aaKnown RBP6.72□□□□□ -1.33
GABPB1-205ENST00000429662 BUB3O43684 328 aa6.72□□□□□ -1.33
GABPB1-205ENST00000429662 CRLF1O75462 422 aa6.72□□□□□ -1.33
GABPB1-205ENST00000429662 ATP5LO75964 103 aa6.72□□□□□ -1.33
GABPB1-205ENST00000429662 ORM1P02763 201 aa6.72□□□□□ -1.33
GABPB1-205ENST00000429662 CACNG7P62955 275 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 105.5 ms