RNA–Protein interactions for RNA: ENST00000426763.3

RPL28-202, Transcript of ribosomal protein L28, humanhuman

TSL 1 (best)

Gene RPL28, Length 5,620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-202ENST00000426763 RASL10AQ92737 203 aa10.87□□□□□ -0.67
RPL28-202ENST00000426763 SPXQ9BT56 116 aa10.87□□□□□ -0.67
RPL28-202ENST00000426763 CBY1Q9Y3M2 126 aa10.87□□□□□ -0.67
RPL28-202ENST00000426763 ODF3L1Q8IXM7 274 aa10.86□□□□□ -0.67
RPL28-202ENST00000426763 IGHV3-64A0A075B6Q5 118 aa10.86□□□□□ -0.67
RPL28-202ENST00000426763 SS18Q15532 418 aa10.86□□□□□ -0.67
RPL28-202ENST00000426763 CACNA1AO00555 2505 aa10.86□□□□□ -0.67
RPL28-202ENST00000426763 C11orf52Q96A22 123 aa10.86□□□□□ -0.67
RPL28-202ENST00000426763 IGHV3-16A0A0C4DH30 117 aa10.86□□□□□ -0.67
RPL28-202ENST00000426763 LINC00587B1AMM8 73 aa10.86□□□□□ -0.67
RPL28-202ENST00000426763 IGHG2P01859 326 aa10.86□□□□□ -0.67
RPL28-202ENST00000426763 LINC00158P58513 81 aa10.86□□□□□ -0.67
RPL28-202ENST00000426763 PLEKHB2Q96CS7 222 aa10.86□□□□□ -0.67
RPL28-202ENST00000426763 HIST1H2BLQ99880 126 aa10.86□□□□□ -0.67
RPL28-202ENST00000426763 NUP210LQ5VU65 1888 aa10.85□□□□□ -0.67
RPL28-202ENST00000426763 ADCYAP1P18509 176 aa10.85□□□□□ -0.67
RPL28-202ENST00000426763 TNFRSF13BO14836 293 aaPredicted RBP10.85□□□□□ -0.67
RPL28-202ENST00000426763 C9JQL5 133 aa10.85□□□□□ -0.67
RPL28-202ENST00000426763 FSTL3O95633 263 aa10.85□□□□□ -0.67
RPL28-202ENST00000426763 PRSS57Q6UWY2 283 aa10.85□□□□□ -0.67
RPL28-202ENST00000426763 CTSGP08311 255 aa10.85□□□□□ -0.67
RPL28-202ENST00000426763 FAM104BQ5XKR9 115 aa10.85□□□□□ -0.67
RPL28-202ENST00000426763 CLPSL1A2RUU4 121 aa10.84□□□□□ -0.67
RPL28-202ENST00000426763 BCL6BQ8N143 479 aaPredicted RBP10.84□□□□□ -0.67
RPL28-202ENST00000426763 HIST3H2BBQ8N257 126 aa10.84□□□□□ -0.67
RPL28-202ENST00000426763 TRAV2A0A0B4J234 112 aa10.84□□□□□ -0.67
RPL28-202ENST00000426763 RBAKDNA6NC62 111 aa10.84□□□□□ -0.67
RPL28-202ENST00000426763 UBE2CO00762 179 aa10.84□□□□□ -0.67
RPL28-202ENST00000426763 CRYGCP07315 174 aa10.84□□□□□ -0.67
RPL28-202ENST00000426763 C17orf77Q96MU5 243 aa10.84□□□□□ -0.67
RPL28-202ENST00000426763 A6NDX4 124 aa10.84□□□□□ -0.67
RPL28-202ENST00000426763 ZC2HC1AQ96GY0 325 aa10.84□□□□□ -0.67
RPL28-202ENST00000426763 NOTCH2Q04721 2471 aa10.84□□□□□ -0.67
RPL28-202ENST00000426763 TRBV25-1A0A075B6N4 114 aa10.84□□□□□ -0.67
RPL28-202ENST00000426763 TRAV13-1A0A0B4J241 112 aa10.84□□□□□ -0.67
RPL28-202ENST00000426763 LENEPQ9Y5L5 61 aa10.84□□□□□ -0.67
RPL28-202ENST00000426763 GHRHP01286 108 aa10.83□□□□□ -0.67
RPL28-202ENST00000426763 IGKV1-17P01599 117 aa10.83□□□□□ -0.67
RPL28-202ENST00000426763 GP9P14770 177 aa10.83□□□□□ -0.67
RPL28-202ENST00000426763 LY6G5BQ8NDX9 201 aa10.83□□□□□ -0.67
RPL28-202ENST00000426763 C11orf68Q9H3H3 251 aaKnown RBP10.83□□□□□ -0.67
RPL28-202ENST00000426763 SPG11Q96JI7 2443 aa10.83□□□□□ -0.68
RPL28-202ENST00000426763 TEX22C9J3V5 150 aa10.83□□□□□ -0.68
RPL28-202ENST00000426763 TMEM256Q8N2U0 113 aa10.83□□□□□ -0.68
RPL28-202ENST00000426763 K7ERU9 68 aa10.83□□□□□ -0.68
RPL28-202ENST00000426763 SLC25A20O43772 301 aa10.83□□□□□ -0.68
RPL28-202ENST00000426763 HLA-DMBP28068 263 aa10.83□□□□□ -0.68
RPL28-202ENST00000426763 DOCK11Q5JSL3 2073 aa10.83□□□□□ -0.68
RPL28-202ENST00000426763 IGHV4OR15-8A0A075B7B6 117 aa10.83□□□□□ -0.68
RPL28-202ENST00000426763 A0A087WW49 117 aa10.83□□□□□ -0.68
RPL28-202ENST00000426763 F6UB75 175 aa10.83□□□□□ -0.68
RPL28-202ENST00000426763 DMRTA1Q5VZB9 504 aa10.83□□□□□ -0.68
RPL28-202ENST00000426763 DYNAPQ8N1N2 210 aa10.83□□□□□ -0.68
RPL28-202ENST00000426763 C5orf30Q96GV9 206 aa10.83□□□□□ -0.68
RPL28-202ENST00000426763 I3L3M4 83 aa10.83□□□□□ -0.68
RPL28-202ENST00000426763 MYCNOSP40205 109 aa10.83□□□□□ -0.68
RPL28-202ENST00000426763 A0A0U1RRA0 63 aa10.82□□□□□ -0.68
RPL28-202ENST00000426763 INS-IGF2F8WCM5 200 aa10.82□□□□□ -0.68
RPL28-202ENST00000426763 PLP1P60201 277 aa10.82□□□□□ -0.68
RPL28-202ENST00000426763 SHANK1Q9Y566 2161 aa10.82□□□□□ -0.68
RPL28-202ENST00000426763 IGHV4-31P0DP07 118 aa10.82□□□□□ -0.68
RPL28-202ENST00000426763 C6orf226Q5I0X4 101 aa10.82□□□□□ -0.68
RPL28-202ENST00000426763 AGPAT4-IT1Q9H0P7 198 aa10.82□□□□□ -0.68
RPL28-202ENST00000426763 PYGO2Q9BRQ0 406 aa10.82□□□□□ -0.68
RPL28-202ENST00000426763 LINC00574Q9H8X3 128 aa10.82□□□□□ -0.68
RPL28-202ENST00000426763 ODF3BA8MYP8 253 aa10.81□□□□□ -0.68
RPL28-202ENST00000426763 TMEM238C9JI98 176 aa10.81□□□□□ -0.68
RPL28-202ENST00000426763 PLCE1Q9P212 2302 aa10.81□□□□□ -0.68
RPL28-202ENST00000426763 DNAJC9-AS1A6NH13 148 aa10.81□□□□□ -0.68
RPL28-202ENST00000426763 LTAP01374 205 aa10.81□□□□□ -0.68
RPL28-202ENST00000426763 SRSF2Q01130 221 aaKnown RBP10.81□□□□□ -0.68
RPL28-202ENST00000426763 V9GYV3 84 aa10.81□□□□□ -0.68
RPL28-202ENST00000426763 ARFGEF3Q5TH69 2177 aa10.81□□□□□ -0.68
RPL28-202ENST00000426763 C16orf54Q6UWD8 224 aa10.81□□□□□ -0.68
RPL28-202ENST00000426763 WFDC11Q8NEX6 87 aa10.81□□□□□ -0.68
RPL28-202ENST00000426763 ZNRF2Q8NHG8 242 aa10.81□□□□□ -0.68
RPL28-202ENST00000426763 NCOR2Q9Y618 2525 aa10.81□□□□□ -0.68
RPL28-202ENST00000426763 M0R2P5 195 aa10.81□□□□□ -0.68
RPL28-202ENST00000426763 IGLV2-14P01704 120 aa10.81□□□□□ -0.68
RPL28-202ENST00000426763 SLAQ13239 276 aa10.81□□□□□ -0.68
RPL28-202ENST00000426763 NOTCH3Q9UM47 2321 aa10.81□□□□□ -0.68
RPL28-202ENST00000426763 K7EMT4 169 aa10.81□□□□□ -0.68
RPL28-202ENST00000426763 C4orf3Q8WVX3 66 aa10.81□□□□□ -0.68
RPL28-202ENST00000426763 C11orf71Q6IPW1 123 aa10.8□□□□□ -0.68
RPL28-202ENST00000426763 SMIM27A0A1W2PRY6 76 aa10.8□□□□□ -0.68
RPL28-202ENST00000426763 SDHAF1A6NFY7 115 aa10.8□□□□□ -0.68
RPL28-202ENST00000426763 Q8N8P6 123 aa10.8□□□□□ -0.68
RPL28-202ENST00000426763 DYSFO75923 2080 aa10.79□□□□□ -0.68
RPL28-202ENST00000426763 CD5LO43866 347 aa10.79□□□□□ -0.68
RPL28-202ENST00000426763 NDUFS6O75380 124 aaKnown RBP10.79□□□□□ -0.68
RPL28-202ENST00000426763 S100A7L2Q5SY68 101 aa10.79□□□□□ -0.68
RPL28-202ENST00000426763 GPHB5Q86YW7 130 aa10.79□□□□□ -0.68
RPL28-202ENST00000426763 APRG1Q8IVJ8 170 aa10.79□□□□□ -0.68
RPL28-202ENST00000426763 MRAPQ8TCY5 172 aa10.79□□□□□ -0.68
RPL28-202ENST00000426763 CGB3P0DN86 165 aa10.79□□□□□ -0.68
RPL28-202ENST00000426763 CGB7P0DN87 165 aa10.79□□□□□ -0.68
RPL28-202ENST00000426763 TP53TG1Q9Y2A0 90 aa10.79□□□□□ -0.68
RPL28-202ENST00000426763 BUB3O43684 328 aa10.79□□□□□ -0.68
RPL28-202ENST00000426763 TMEM243Q9BU79 118 aa10.79□□□□□ -0.68
RPL28-202ENST00000426763 HIVEP2P31629 2446 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms