RNA–Protein interactions for RNA: ENST00000424634.5

NUP50-207, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-207ENST00000424634 RGS13O14921 159 aa12.78□□□□□ -0.36
NUP50-207ENST00000424634 CSN1S1P47710 185 aa12.78□□□□□ -0.36
NUP50-207ENST00000424634 TNP2Q05952 138 aa12.78□□□□□ -0.36
NUP50-207ENST00000424634 KHDC3LQ587J8 217 aa12.78□□□□□ -0.36
NUP50-207ENST00000424634 RYR1P21817 5038 aa12.77□□□□□ -0.37
NUP50-207ENST00000424634 DIRC3C9JPN6 131 aa12.77□□□□□ -0.37
NUP50-207ENST00000424634 ZNF266Q14584 549 aa12.77□□□□□ -0.37
NUP50-207ENST00000424634 IBA57Q5T440 356 aaKnown RBP12.77□□□□□ -0.37
NUP50-207ENST00000424634 C6orf223Q8N319 242 aa12.77□□□□□ -0.37
NUP50-207ENST00000424634 A0A096LPF7 62 aa12.76□□□□□ -0.37
NUP50-207ENST00000424634 TAS2R45P59539 299 aa12.76□□□□□ -0.37
NUP50-207ENST00000424634 HYLS1Q96M11 299 aa12.76□□□□□ -0.37
NUP50-207ENST00000424634 KRTAP1-5Q9BYS1 174 aa12.76□□□□□ -0.37
NUP50-207ENST00000424634 PGPA6NDG6 321 aa12.75□□□□□ -0.37
NUP50-207ENST00000424634 MED14OSP0DP75 135 aa12.75□□□□□ -0.37
NUP50-207ENST00000424634 RAB2AP61019 212 aa12.75□□□□□ -0.37
NUP50-207ENST00000424634 ACOT6Q3I5F7 207 aaPredicted RBP12.75□□□□□ -0.37
NUP50-207ENST00000424634 MUC21Q5SSG8 566 aa12.75□□□□□ -0.37
NUP50-207ENST00000424634 ZNF575Q86XF7 245 aa12.75□□□□□ -0.37
NUP50-207ENST00000424634 MRPL16Q9NX20 251 aaKnown RBP12.75□□□□□ -0.37
NUP50-207ENST00000424634 HMGB3O15347 200 aaKnown RBP12.74□□□□□ -0.37
NUP50-207ENST00000424634 ST6GAL2Q96JF0 529 aa12.74□□□□□ -0.37
NUP50-207ENST00000424634 UPK3BQ9BT76 320 aa12.74□□□□□ -0.37
NUP50-207ENST00000424634 OTORQ9NRC9 128 aa12.74□□□□□ -0.37
NUP50-207ENST00000424634 MDFICQ9P1T7 246 aa12.74□□□□□ -0.37
NUP50-207ENST00000424634 LRP1BQ9NZR2 4599 aa12.74□□□□□ -0.37
NUP50-207ENST00000424634 IGHV3-53P01767 116 aa12.73□□□□□ -0.37
NUP50-207ENST00000424634 Q5BKY6 102 aa12.73□□□□□ -0.37
NUP50-207ENST00000424634 Q6AWC8 147 aa12.73□□□□□ -0.37
NUP50-207ENST00000424634 ARPC5LQ9BPX5 153 aa12.73□□□□□ -0.37
NUP50-207ENST00000424634 MRPS16Q9Y3D3 137 aaKnown RBP12.73□□□□□ -0.37
NUP50-207ENST00000424634 LENEPQ9Y5L5 61 aa12.73□□□□□ -0.37
NUP50-207ENST00000424634 A0A1W2PPV4 95 aa12.72□□□□□ -0.37
NUP50-207ENST00000424634 PQLC2Q6ZP29 291 aa12.72□□□□□ -0.37
NUP50-207ENST00000424634 OR10G4Q8NGN3 311 aa12.72□□□□□ -0.37
NUP50-207ENST00000424634 OR10G9Q8NGN4 311 aa12.72□□□□□ -0.37
NUP50-207ENST00000424634 OR10G7Q8NGN6 311 aa12.72□□□□□ -0.37
NUP50-207ENST00000424634 PTTG1O95997 202 aa12.71□□□□□ -0.37
NUP50-207ENST00000424634 ZNF415Q09FC8 603 aa12.71□□□□□ -0.37
NUP50-207ENST00000424634 FHL2Q14192 279 aa12.71□□□□□ -0.37
NUP50-207ENST00000424634 TMED6Q8WW62 240 aa12.71□□□□□ -0.37
NUP50-207ENST00000424634 TVP23CQ96ET8 276 aa12.71□□□□□ -0.37
NUP50-207ENST00000424634 MED28Q9H204 178 aa12.71□□□□□ -0.37
NUP50-207ENST00000424634 RPH3ALQ9UNE2 315 aa12.71□□□□□ -0.37
NUP50-207ENST00000424634 PAX4O43316 350 aa12.7□□□□□ -0.38
NUP50-207ENST00000424634 GOLT1AQ6ZVE7 132 aa12.7□□□□□ -0.38
NUP50-207ENST00000424634 HSD17B11Q8NBQ5 300 aa12.7□□□□□ -0.38
NUP50-207ENST00000424634 CMTM2Q8TAZ6 248 aa12.7□□□□□ -0.38
NUP50-207ENST00000424634 AQP10Q96PS8 301 aa12.7□□□□□ -0.38
NUP50-207ENST00000424634 HSPG2P98160 4391 aa12.69□□□□□ -0.38
NUP50-207ENST00000424634 TRAV8-1A0A0A6YYK1 113 aa12.69□□□□□ -0.38
NUP50-207ENST00000424634 ARL14EPLP0DKL9 152 aa12.69□□□□□ -0.38
NUP50-207ENST00000424634 CRYBA4P53673 196 aa12.69□□□□□ -0.38
NUP50-207ENST00000424634 GNG5P63218 68 aa12.69□□□□□ -0.38
NUP50-207ENST00000424634 TMEM183BQ1AE95 376 aa12.69□□□□□ -0.38
NUP50-207ENST00000424634 TMEM183AQ8IXX5 376 aa12.69□□□□□ -0.38
NUP50-207ENST00000424634 ARL6IP6Q8N6S5 226 aa12.69□□□□□ -0.38
NUP50-207ENST00000424634 OR2G3Q8NGZ4 309 aa12.69□□□□□ -0.38
NUP50-207ENST00000424634 PRO0255Q9UI72 69 aa12.69□□□□□ -0.38
NUP50-207ENST00000424634 HHLA3Q9XRX5 114 aa12.69□□□□□ -0.38
NUP50-207ENST00000424634 GNRH2O43555 120 aa12.68□□□□□ -0.38
NUP50-207ENST00000424634 STAG3L2P0CL84 134 aa12.68□□□□□ -0.38
NUP50-207ENST00000424634 STAG3L3P0CL85 134 aa12.68□□□□□ -0.38
NUP50-207ENST00000424634 ATP6V0CP27449 155 aa12.68□□□□□ -0.38
NUP50-207ENST00000424634 FAM74A1Q5RGS3 127 aa12.68□□□□□ -0.38
NUP50-207ENST00000424634 FAM159AQ6UWV7 190 aa12.68□□□□□ -0.38
NUP50-207ENST00000424634 C8orf49Q96NF6 230 aa12.68□□□□□ -0.38
NUP50-207ENST00000424634 DNAH5Q8TE73 4624 aa12.67□□□□□ -0.38
NUP50-207ENST00000424634 SFTA3P0C7M3 94 aa12.67□□□□□ -0.38
NUP50-207ENST00000424634 CDC34P49427 236 aaPredicted RBP12.67□□□□□ -0.38
NUP50-207ENST00000424634 TDRG1Q3Y452 100 aa12.67□□□□□ -0.38
NUP50-207ENST00000424634 TTC32Q5I0X7 151 aa12.67□□□□□ -0.38
NUP50-207ENST00000424634 SUN5Q8TC36 379 aa12.67□□□□□ -0.38
NUP50-207ENST00000424634 RASL10AQ92737 203 aa12.67□□□□□ -0.38
NUP50-207ENST00000424634 RAB24Q969Q5 203 aa12.67□□□□□ -0.38
NUP50-207ENST00000424634 ZNF479Q96JC4 524 aa12.67□□□□□ -0.38
NUP50-207ENST00000424634 SGK494Q96LW2 274 aa12.67□□□□□ -0.38
NUP50-207ENST00000424634 PSMG3Q9BT73 122 aaPredicted RBP12.67□□□□□ -0.38
NUP50-207ENST00000424634 ICOSQ9Y6W8 199 aa12.67□□□□□ -0.38
NUP50-207ENST00000424634 A0A1W2PPQ1 181 aa12.66□□□□□ -0.38
NUP50-207ENST00000424634 F6UZH7 168 aa12.66□□□□□ -0.38
NUP50-207ENST00000424634 SLAQ13239 276 aa12.66□□□□□ -0.38
NUP50-207ENST00000424634 SPXQ9BT56 116 aa12.66□□□□□ -0.38
NUP50-207ENST00000424634 SH3BGRL3Q9H299 93 aa12.66□□□□□ -0.38
NUP50-207ENST00000424634 NAGKQ9UJ70 344 aa12.66□□□□□ -0.38
NUP50-207ENST00000424634 TRGV11A0A075B6L2 103 aa12.65□□□□□ -0.38
NUP50-207ENST00000424634 LYPD5Q6UWN5 251 aa12.65□□□□□ -0.38
NUP50-207ENST00000424634 IQCF2Q8IXL9 164 aa12.65□□□□□ -0.38
NUP50-207ENST00000424634 TREM1Q9NP99 234 aa12.65□□□□□ -0.38
NUP50-207ENST00000424634 ABCA13Q86UQ4 5058 aa12.65□□□□□ -0.38
NUP50-207ENST00000424634 TRAV21A0A0B4J279 112 aa12.64□□□□□ -0.39
NUP50-207ENST00000424634 IGHV3-16A0A0C4DH30 117 aa12.64□□□□□ -0.39
NUP50-207ENST00000424634 GIPP09681 153 aaPredicted RBP12.64□□□□□ -0.39
NUP50-207ENST00000424634 GCHFRP30047 84 aa12.64□□□□□ -0.39
NUP50-207ENST00000424634 SERF2P84101 59 aa12.64□□□□□ -0.39
NUP50-207ENST00000424634 APOBP04114 4563 aaKnown RBP12.63□□□□□ -0.39
NUP50-207ENST00000424634 TRGV4A0A0C4DH28 118 aa12.63□□□□□ -0.39
NUP50-207ENST00000424634 RNF222A6NCQ9 220 aa12.63□□□□□ -0.39
NUP50-207ENST00000424634 C16orf90A8MZG2 172 aa12.63□□□□□ -0.39
NUP50-207ENST00000424634 SIVA1O15304 175 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 217.5 ms