RNA–Protein interactions for RNA: ENST00000424011.6

CMTM3-202, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CMTM3, Length 2,330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-202ENST00000424011 DEFB112Q30KQ8 113 aa12.78□□□□□ -0.36
CMTM3-202ENST00000424011 GDF5OSQ5U4N7 250 aa12.78□□□□□ -0.36
CMTM3-202ENST00000424011 AP1S3Q96PC3 154 aa12.78□□□□□ -0.36
CMTM3-202ENST00000424011 MS4A6AQ9H2W1 248 aa12.78□□□□□ -0.36
CMTM3-202ENST00000424011 RPP21Q9H633 154 aaKnown RBP12.78□□□□□ -0.36
CMTM3-202ENST00000424011 ZNF492Q9P255 531 aa12.78□□□□□ -0.36
CMTM3-202ENST00000424011 LINC00527Q9UJ94 153 aa12.78□□□□□ -0.36
CMTM3-202ENST00000424011 ZNF580Q9UK33 172 aa12.78□□□□□ -0.36
CMTM3-202ENST00000424011 AZU1P20160 251 aa12.78□□□□□ -0.36
CMTM3-202ENST00000424011 SCGB2A2Q13296 93 aa12.78□□□□□ -0.36
CMTM3-202ENST00000424011 BLCAPP62952 87 aa12.77□□□□□ -0.36
CMTM3-202ENST00000424011 METTL26Q96S19 204 aa12.77□□□□□ -0.36
CMTM3-202ENST00000424011 IGHV3-35A0A0C4DH35 117 aa12.77□□□□□ -0.37
CMTM3-202ENST00000424011 P01737 135 aa12.77□□□□□ -0.37
CMTM3-202ENST00000424011 DAZAP1Q96EP5 407 aaKnown RBP12.77□□□□□ -0.37
CMTM3-202ENST00000424011 JMJD8Q96S16 334 aa12.77□□□□□ -0.37
CMTM3-202ENST00000424011 ASCL2Q99929 193 aa12.77□□□□□ -0.37
CMTM3-202ENST00000424011 CELSR1Q9NYQ6 3014 aa12.77□□□□□ -0.37
CMTM3-202ENST00000424011 H3BRM9 83 aa12.76□□□□□ -0.37
CMTM3-202ENST00000424011 M0R3E3 92 aa12.76□□□□□ -0.37
CMTM3-202ENST00000424011 BUB3O43684 328 aa12.76□□□□□ -0.37
CMTM3-202ENST00000424011 FAM162BQ5T6X4 162 aa12.76□□□□□ -0.37
CMTM3-202ENST00000424011 C9orf139Q6ZV77 190 aa12.76□□□□□ -0.37
CMTM3-202ENST00000424011 URB1-AS1Q96HZ7 61 aa12.76□□□□□ -0.37
CMTM3-202ENST00000424011 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.76□□□□□ -0.374e-6■■□□□ 13.3
CMTM3-202ENST00000424011 A0A0G2JLM5 398 aa12.76□□□□□ -0.37
CMTM3-202ENST00000424011 FBLL1A6NHQ2 334 aaKnown RBP12.76□□□□□ -0.37
CMTM3-202ENST00000424011 GTSF1Q8WW33 167 aa12.76□□□□□ -0.37
CMTM3-202ENST00000424011 SIGMAR1Q99720 223 aa12.76□□□□□ -0.37
CMTM3-202ENST00000424011 ZNF785A8K8V0 405 aa12.75□□□□□ -0.37
CMTM3-202ENST00000424011 FSHBP01225 129 aa12.75□□□□□ -0.37
CMTM3-202ENST00000424011 IGHV4-59P01825 116 aa12.75□□□□□ -0.37
CMTM3-202ENST00000424011 TMEM97Q5BJF2 176 aa12.75□□□□□ -0.37
CMTM3-202ENST00000424011 CT83Q5H943 113 aa12.75□□□□□ -0.37
CMTM3-202ENST00000424011 C2orf91Q6ZV80 131 aa12.75□□□□□ -0.37
CMTM3-202ENST00000424011 PMCHL2Q9BQD1 86 aa12.75□□□□□ -0.37
CMTM3-202ENST00000424011 NPFFR1Q9GZQ6 430 aa12.75□□□□□ -0.37
CMTM3-202ENST00000424011 IGHV3OR16-8A0A075B7F1 116 aa12.74□□□□□ -0.37
CMTM3-202ENST00000424011 A8MWL6 223 aa12.74□□□□□ -0.37
CMTM3-202ENST00000424011 ARL3P36405 182 aa12.74□□□□□ -0.37
CMTM3-202ENST00000424011 OR5A1Q8NGJ0 315 aa12.74□□□□□ -0.37
CMTM3-202ENST00000424011 OR2K2Q8NGT1 345 aa12.74□□□□□ -0.37
CMTM3-202ENST00000424011 A0A1B0GXF2 115 aa12.74□□□□□ -0.37
CMTM3-202ENST00000424011 NPIPB6E9PJ23 425 aa12.74□□□□□ -0.37
CMTM3-202ENST00000424011 CAMPP49913 170 aa12.74□□□□□ -0.37
CMTM3-202ENST00000424011 GTSF1LQ9H1H1 148 aa12.74□□□□□ -0.37
CMTM3-202ENST00000424011 PSG8Q9UQ74 426 aa12.74□□□□□ -0.37
CMTM3-202ENST00000424011 CLPSL1A2RUU4 121 aa12.73□□□□□ -0.37
CMTM3-202ENST00000424011 H3BUT2 72 aa12.73□□□□□ -0.37
CMTM3-202ENST00000424011 LEPROTL1O95214 131 aa12.73□□□□□ -0.37
CMTM3-202ENST00000424011 IGLV1-40P01703 118 aa12.73□□□□□ -0.37
CMTM3-202ENST00000424011 PF4V1P10720 104 aa12.73□□□□□ -0.37
CMTM3-202ENST00000424011 SMAGPQ0VAQ4 97 aa12.73□□□□□ -0.37
CMTM3-202ENST00000424011 LINC00173Q6ZV60 143 aa12.73□□□□□ -0.37
CMTM3-202ENST00000424011 SSBP4Q9BWG4 385 aaPredicted RBP12.73□□□□□ -0.37
CMTM3-202ENST00000424011 SMAD5-AS1Q9Y6J3 95 aa12.73□□□□□ -0.37
CMTM3-202ENST00000424011 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.73□□□□□ -0.37
CMTM3-202ENST00000424011 COX8AP10176 69 aa12.73□□□□□ -0.37
CMTM3-202ENST00000424011 PRR31Q5SQ13 230 aa12.73□□□□□ -0.37
CMTM3-202ENST00000424011 WFDC11Q8NEX6 87 aa12.73□□□□□ -0.37
CMTM3-202ENST00000424011 OR10AG1Q8NH19 301 aa12.73□□□□□ -0.37
CMTM3-202ENST00000424011 SELENOKQ9Y6D0 94 aa12.73□□□□□ -0.37
CMTM3-202ENST00000424011 PRRC2AP48634 2157 aaKnown RBP12.73□□□□□ -0.37
CMTM3-202ENST00000424011 FASNP49327 2511 aaKnown RBP12.73□□□□□ -0.37
CMTM3-202ENST00000424011 IGHV1-24A0A0C4DH33 117 aa12.72□□□□□ -0.37
CMTM3-202ENST00000424011 A6NDN8 102 aa12.72□□□□□ -0.37
CMTM3-202ENST00000424011 ATP5L2Q7Z4Y8 100 aa12.72□□□□□ -0.37
CMTM3-202ENST00000424011 PGLYRP4Q96LB8 373 aa12.72□□□□□ -0.37
CMTM3-202ENST00000424011 ZFHX3Q15911 3703 aa12.72□□□□□ -0.37
CMTM3-202ENST00000424011 PDZD2O15018 2839 aa12.72□□□□□ -0.37
CMTM3-202ENST00000424011 UNC79Q9P2D8 2635 aa12.72□□□□□ -0.37
CMTM3-202ENST00000424011 NDUFA4O00483 81 aa12.72□□□□□ -0.37
CMTM3-202ENST00000424011 CFHR3Q02985 330 aa12.72□□□□□ -0.37
CMTM3-202ENST00000424011 Q6YL49 198 aa12.72□□□□□ -0.37
CMTM3-202ENST00000424011 CHCHD1Q96BP2 118 aaKnown RBP12.72□□□□□ -0.37
CMTM3-202ENST00000424011 SLC50A1Q9BRV3 221 aa12.72□□□□□ -0.37
CMTM3-202ENST00000424011 GFRA4Q9GZZ7 299 aa12.72□□□□□ -0.37
CMTM3-202ENST00000424011 VPREB3Q9UKI3 123 aa12.72□□□□□ -0.37
CMTM3-202ENST00000424011 CFAP161Q6P656 301 aa12.71□□□□□ -0.37
CMTM3-202ENST00000424011 Q6ZS46 218 aa12.71□□□□□ -0.37
CMTM3-202ENST00000424011 U3KQE9 123 aa12.71□□□□□ -0.37
CMTM3-202ENST00000424011 ZNF469Q96JG9 3925 aaPredicted RBP12.71□□□□□ -0.38
CMTM3-202ENST00000424011 CR1P17927 2039 aa12.71□□□□□ -0.38
CMTM3-202ENST00000424011 HSD52Q0P140 79 aa12.71□□□□□ -0.38
CMTM3-202ENST00000424011 FOXE3Q13461 319 aa12.71□□□□□ -0.38
CMTM3-202ENST00000424011 TEX29Q8N6K0 151 aa12.71□□□□□ -0.38
CMTM3-202ENST00000424011 ZANQ9Y493 2812 aa12.7□□□□□ -0.38
CMTM3-202ENST00000424011 CRIP1P50238 77 aa12.7□□□□□ -0.38
CMTM3-202ENST00000424011 HBBP68871 147 aa12.7□□□□□ -0.38
CMTM3-202ENST00000424011 FOXC2Q99958 501 aa12.7□□□□□ -0.38
CMTM3-202ENST00000424011 MAP1LC3CQ9BXW4 147 aa12.7□□□□□ -0.38
CMTM3-202ENST00000424011 ITPR2Q14571 2701 aa12.7□□□□□ -0.38
CMTM3-202ENST00000424011 TMEM89A2RUT3 159 aa12.7□□□□□ -0.38
CMTM3-202ENST00000424011 A6NJY4 79 aa12.7□□□□□ -0.38
CMTM3-202ENST00000424011 CT45A10P0DMU9 189 aa12.7□□□□□ -0.38
CMTM3-202ENST00000424011 RBPMS2Q6ZRY4 209 aaKnown RBP12.7□□□□□ -0.38
CMTM3-202ENST00000424011 OR4X2Q8NGF9 303 aa12.7□□□□□ -0.38
CMTM3-202ENST00000424011 C8orf49Q96NF6 230 aa12.7□□□□□ -0.38
CMTM3-202ENST00000424011 KLK15Q9H2R5 256 aa12.7□□□□□ -0.38
CMTM3-202ENST00000424011 CHEK1O14757 476 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms