RNA–Protein interactions for RNA: ENST00000423141.1

NPC1L1-203, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-203ENST00000423141 C11orf21Q9P2W6 132 aa12.89□□□□□ -0.35
NPC1L1-203ENST00000423141 SH3BGRL2Q9UJC5 107 aa12.89□□□□□ -0.35
NPC1L1-203ENST00000423141 CACNA1HO95180 2353 aa12.88□□□□□ -0.35
NPC1L1-203ENST00000423141 IGKV3D-20A0A0C4DH25 116 aa12.88□□□□□ -0.35
NPC1L1-203ENST00000423141 HLA-DRB4P13762 266 aa12.88□□□□□ -0.35
NPC1L1-203ENST00000423141 NDPQ00604 133 aa12.88□□□□□ -0.35
NPC1L1-203ENST00000423141 C20orf78Q9BR46 151 aa12.88□□□□□ -0.35
NPC1L1-203ENST00000423141 C21orf62Q9NYP8 219 aa12.88□□□□□ -0.35
NPC1L1-203ENST00000423141 HLA-DRB4X5D2U9 266 aa12.88□□□□□ -0.35
NPC1L1-203ENST00000423141 TRBV7-3A0A075B6L6 115 aa12.88□□□□□ -0.35
NPC1L1-203ENST00000423141 ANKRD11Q6UB99 2663 aaPredicted RBP12.88□□□□□ -0.35
NPC1L1-203ENST00000423141 Q6ZQT7 251 aa12.88□□□□□ -0.35
NPC1L1-203ENST00000423141 MYOZ3Q8TDC0 251 aa12.88□□□□□ -0.35
NPC1L1-203ENST00000423141 A0A087WX48 190 aa12.87□□□□□ -0.35
NPC1L1-203ENST00000423141 E7EQL1 145 aa12.87□□□□□ -0.35
NPC1L1-203ENST00000423141 LINC01559Q495D7 138 aa12.87□□□□□ -0.35
NPC1L1-203ENST00000423141 NRACQ8N912 160 aa12.87□□□□□ -0.35
NPC1L1-203ENST00000423141 ONECUT1Q9UBC0 465 aa12.87□□□□□ -0.35
NPC1L1-203ENST00000423141 LAGE3Q14657 143 aa12.87□□□□□ -0.35
NPC1L1-203ENST00000423141 RNF5Q99942 180 aa12.87□□□□□ -0.35
NPC1L1-203ENST00000423141 UFC1Q9Y3C8 167 aa12.87□□□□□ -0.35
NPC1L1-203ENST00000423141 A0A1B0GWB2 263 aa12.86□□□□□ -0.35
NPC1L1-203ENST00000423141 NDUFS8O00217 210 aa12.86□□□□□ -0.35
NPC1L1-203ENST00000423141 CKS1BP61024 79 aa12.86□□□□□ -0.35
NPC1L1-203ENST00000423141 HES1Q14469 280 aa12.86□□□□□ -0.35
NPC1L1-203ENST00000423141 TAL2Q16559 108 aa12.86□□□□□ -0.35
NPC1L1-203ENST00000423141 FAM57AQ8TBR7 257 aa12.86□□□□□ -0.35
NPC1L1-203ENST00000423141 ZNF502Q8TBZ5 544 aa12.86□□□□□ -0.35
NPC1L1-203ENST00000423141 SRSF2Q01130 221 aaKnown RBP12.86□□□□□ -0.35
NPC1L1-203ENST00000423141 MORN3Q6PF18 240 aaPredicted RBP12.86□□□□□ -0.35
NPC1L1-203ENST00000423141 CYSLTR1Q9Y271 337 aa12.86□□□□□ -0.35
NPC1L1-203ENST00000423141 AKAP13Q12802 2813 aa12.85□□□□□ -0.35
NPC1L1-203ENST00000423141 NCBP2LA6PVI3 153 aaKnown RBP12.85□□□□□ -0.35
NPC1L1-203ENST00000423141 CTSGP08311 255 aa12.85□□□□□ -0.35
NPC1L1-203ENST00000423141 KLK15Q9H2R5 256 aa12.85□□□□□ -0.35
NPC1L1-203ENST00000423141 ASH1LQ9NR48 2969 aaKnown RBP12.85□□□□□ -0.35
NPC1L1-203ENST00000423141 SFTA2Q6UW10 78 aa12.85□□□□□ -0.35
NPC1L1-203ENST00000423141 IGHV3-66A0A0C4DH42 116 aa12.84□□□□□ -0.35
NPC1L1-203ENST00000423141 KLRD1Q13241 179 aa12.84□□□□□ -0.35
NPC1L1-203ENST00000423141 Q6ZS92 163 aa12.84□□□□□ -0.35
NPC1L1-203ENST00000423141 DEFB124Q8NES8 71 aa12.84□□□□□ -0.35
NPC1L1-203ENST00000423141 APOMO95445 188 aa12.84□□□□□ -0.35
NPC1L1-203ENST00000423141 C5orf64Q2M2E5 130 aa12.83□□□□□ -0.35
NPC1L1-203ENST00000423141 ABCA4P78363 2273 aa12.83□□□□□ -0.36
NPC1L1-203ENST00000423141 IGHV3OR16-13A0A075B7E8 117 aa12.83□□□□□ -0.36
NPC1L1-203ENST00000423141 IGHV3-74A0A0B4J1X5 117 aa12.83□□□□□ -0.36
NPC1L1-203ENST00000423141 PLNP26678 52 aa12.83□□□□□ -0.36
NPC1L1-203ENST00000423141 SMCPP49901 116 aaPredicted RBP12.83□□□□□ -0.36
NPC1L1-203ENST00000423141 ZNF672Q499Z4 452 aaPredicted RBP12.83□□□□□ -0.36
NPC1L1-203ENST00000423141 ZNF48Q96MX3 618 aaPredicted RBP12.83□□□□□ -0.36
NPC1L1-203ENST00000423141 PGPEP1Q9NXJ5 209 aa12.83□□□□□ -0.36
NPC1L1-203ENST00000423141 MYMXA0A1B0GTQ4 84 aa12.82□□□□□ -0.36
NPC1L1-203ENST00000423141 ACACAQ13085 2346 aa12.82□□□□□ -0.36
NPC1L1-203ENST00000423141 TRAV26-1A0A087WT03 109 aa12.82□□□□□ -0.36
NPC1L1-203ENST00000423141 IGHV7-4-1A0A0J9YVY3 117 aa12.82□□□□□ -0.36
NPC1L1-203ENST00000423141 IGFL3Q6UXB1 125 aa12.82□□□□□ -0.36
NPC1L1-203ENST00000423141 NPBQ8NG41 125 aa12.82□□□□□ -0.36
NPC1L1-203ENST00000423141 OR11H12B2RN74 326 aa12.81□□□□□ -0.36
NPC1L1-203ENST00000423141 NFE4Q86UQ8 179 aa12.81□□□□□ -0.36
NPC1L1-203ENST00000423141 SYT8Q8NBV8 401 aa12.81□□□□□ -0.36
NPC1L1-203ENST00000423141 OR11H1Q8NG94 326 aa12.81□□□□□ -0.36
NPC1L1-203ENST00000423141 OR11H2Q8NH07 326 aa12.81□□□□□ -0.36
NPC1L1-203ENST00000423141 AGPAT4-IT1Q9H0P7 198 aa12.81□□□□□ -0.36
NPC1L1-203ENST00000423141 F8VRH5 84 aa12.81□□□□□ -0.36
NPC1L1-203ENST00000423141 SPRY2O43597 315 aa12.81□□□□□ -0.36
NPC1L1-203ENST00000423141 LGALS1P09382 135 aaKnown RBP12.81□□□□□ -0.36
NPC1L1-203ENST00000423141 FOXI1Q12951 378 aa12.81□□□□□ -0.36
NPC1L1-203ENST00000423141 FHL3Q13643 280 aa12.81□□□□□ -0.36
NPC1L1-203ENST00000423141 DPM3Q9P2X0 92 aa12.81□□□□□ -0.36
NPC1L1-203ENST00000423141 CDIP1Q9H305 208 aa12.8□□□□□ -0.36
NPC1L1-203ENST00000423141 H7C1H1 209 aa12.8□□□□□ -0.36
NPC1L1-203ENST00000423141 HOXA3O43365 443 aaPredicted RBP12.8□□□□□ -0.36
NPC1L1-203ENST00000423141 TCTEX1D4Q5JR98 221 aa12.8□□□□□ -0.36
NPC1L1-203ENST00000423141 MRPL16Q9NX20 251 aaKnown RBP12.8□□□□□ -0.36
NPC1L1-203ENST00000423141 CFAP126Q5VTH2 177 aa12.79□□□□□ -0.36
NPC1L1-203ENST00000423141 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.79□□□□□ -0.36
NPC1L1-203ENST00000423141 GLMPQ8WWB7 406 aa12.79□□□□□ -0.36
NPC1L1-203ENST00000423141 MED13LQ71F56 2210 aa12.79□□□□□ -0.36
NPC1L1-203ENST00000423141 LINC01548A6NM66 108 aa12.79□□□□□ -0.36
NPC1L1-203ENST00000423141 PTH2Q96A98 100 aa12.79□□□□□ -0.36
NPC1L1-203ENST00000423141 C1QTNF4Q9BXJ3 329 aa12.79□□□□□ -0.36
NPC1L1-203ENST00000423141 OTOGLQ3ZCN5 2332 aa12.79□□□□□ -0.36
NPC1L1-203ENST00000423141 IGHV3-49A0A0A0MS15 119 aa12.78□□□□□ -0.36
NPC1L1-203ENST00000423141 PRSS47A8MTI9 375 aa12.78□□□□□ -0.36
NPC1L1-203ENST00000423141 LY6HO94772 140 aa12.78□□□□□ -0.36
NPC1L1-203ENST00000423141 SPANXN1Q5VSR9 72 aa12.78□□□□□ -0.36
NPC1L1-203ENST00000423141 ZFP2Q6ZN57 461 aa12.78□□□□□ -0.36
NPC1L1-203ENST00000423141 MRAP2Q96G30 205 aa12.78□□□□□ -0.36
NPC1L1-203ENST00000423141 LINC01549A6NIU2 74 aa12.78□□□□□ -0.36
NPC1L1-203ENST00000423141 PLEKHB2Q96CS7 222 aa12.78□□□□□ -0.36
NPC1L1-203ENST00000423141 COLQQ9Y215 455 aaPredicted RBP12.78□□□□□ -0.36
NPC1L1-203ENST00000423141 MSRB2Q9Y3D2 182 aa12.78□□□□□ -0.36
NPC1L1-203ENST00000423141 ZFHX3Q15911 3703 aa12.78□□□□□ -0.36
NPC1L1-203ENST00000423141 MT-ATP8P03928 68 aa12.77□□□□□ -0.36
NPC1L1-203ENST00000423141 TMEM78Q5T7P6 136 aa12.77□□□□□ -0.36
NPC1L1-203ENST00000423141 C8orf86Q6ZUL3 223 aa12.77□□□□□ -0.36
NPC1L1-203ENST00000423141 SMIM2Q9BVW6 85 aa12.77□□□□□ -0.36
NPC1L1-203ENST00000423141 GEMIN7Q9H840 131 aaKnown RBP12.77□□□□□ -0.36
NPC1L1-203ENST00000423141 H3BVH4 76 aa12.77□□□□□ -0.37
NPC1L1-203ENST00000423141 BUB3O43684 328 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms