RNA–Protein interactions for RNA: ENST00000421999.7

CMSS1-201, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMSS1, Length 4,330 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-201ENST00000421999 ATRAIDQ6UW56 229 aa7.59□□□□□ -1.19
CMSS1-201ENST00000421999 VGLL1Q99990 258 aa7.59□□□□□ -1.19
CMSS1-201ENST00000421999 IGLV11-55A0A075B6I3 123 aa7.59□□□□□ -1.19
CMSS1-201ENST00000421999 APRG1Q8IVJ8 170 aa7.59□□□□□ -1.19
CMSS1-201ENST00000421999 TMEM86BQ8N661 226 aa7.59□□□□□ -1.19
CMSS1-201ENST00000421999 TMEM70Q9BUB7 260 aa7.59□□□□□ -1.19
CMSS1-201ENST00000421999 H3BRN7 92 aa7.59□□□□□ -1.19
CMSS1-201ENST00000421999 IGKV1-17P01599 117 aa7.59□□□□□ -1.19
CMSS1-201ENST00000421999 EIF4EBP1Q13541 118 aaPredicted RBP7.59□□□□□ -1.19
CMSS1-201ENST00000421999 C2orf88Q9BSF0 95 aa7.59□□□□□ -1.19
CMSS1-201ENST00000421999 NDUFA3O95167 84 aa7.59□□□□□ -1.2
CMSS1-201ENST00000421999 NCR2O95944 276 aa7.59□□□□□ -1.2
CMSS1-201ENST00000421999 LINC01551Q86U37 167 aa7.59□□□□□ -1.2
CMSS1-201ENST00000421999 TMEM190Q8WZ59 177 aa7.59□□□□□ -1.2
CMSS1-201ENST00000421999 CFHR4Q92496 578 aa7.59□□□□□ -1.2
CMSS1-201ENST00000421999 VPS25Q9BRG1 176 aa7.59□□□□□ -1.2
CMSS1-201ENST00000421999 TMEM160Q9NX00 188 aa7.59□□□□□ -1.2
CMSS1-201ENST00000421999 LINC01548A6NM66 108 aa7.58□□□□□ -1.2
CMSS1-201ENST00000421999 TEX22C9J3V5 150 aa7.58□□□□□ -1.2
CMSS1-201ENST00000421999 P0C879 139 aa7.58□□□□□ -1.2
CMSS1-201ENST00000421999 HLA-DMBP28068 263 aa7.58□□□□□ -1.2
CMSS1-201ENST00000421999 IFI27P40305 119 aaPredicted RBP7.58□□□□□ -1.2
CMSS1-201ENST00000421999 PSMB2P49721 201 aa7.58□□□□□ -1.2
CMSS1-201ENST00000421999 ZNF726P1Q15940 193 aa7.58□□□□□ -1.2
CMSS1-201ENST00000421999 SPAG8Q99932 426 aaPredicted RBP7.58□□□□□ -1.2
CMSS1-201ENST00000421999 CFAP46Q8IYW2 2715 aa7.58□□□□□ -1.2
CMSS1-201ENST00000421999 CTSGP08311 255 aa7.58□□□□□ -1.2
CMSS1-201ENST00000421999 VCX2Q9H322 139 aa7.58□□□□□ -1.2
CMSS1-201ENST00000421999 CARHSP1Q9Y2V2 147 aaKnown RBP7.58□□□□□ -1.2
CMSS1-201ENST00000421999 HCFC1P51610 2035 aa7.58□□□□□ -1.2
CMSS1-201ENST00000421999 IGHV3-16A0A0C4DH30 117 aa7.58□□□□□ -1.2
CMSS1-201ENST00000421999 Q86TA4 180 aa7.58□□□□□ -1.2
CMSS1-201ENST00000421999 LGALS3P17931 250 aaKnown RBP7.57□□□□□ -1.2
CMSS1-201ENST00000421999 MALP21145 153 aa7.57□□□□□ -1.2
CMSS1-201ENST00000421999 Q6YL49 198 aa7.57□□□□□ -1.2
CMSS1-201ENST00000421999 PIFOQ8TCI5 191 aa7.57□□□□□ -1.2
CMSS1-201ENST00000421999 PHLDA1Q8WV24 401 aaPredicted RBP7.57□□□□□ -1.2
CMSS1-201ENST00000421999 LY6LH3BQJ8 138 aa7.57□□□□□ -1.2
CMSS1-201ENST00000421999 CD28P10747 220 aa7.57□□□□□ -1.2
CMSS1-201ENST00000421999 DDTP30046 118 aa7.57□□□□□ -1.2
CMSS1-201ENST00000421999 MYCNOSP40205 109 aa7.57□□□□□ -1.2
CMSS1-201ENST00000421999 VAMP3Q15836 100 aa7.57□□□□□ -1.2
CMSS1-201ENST00000421999 THAP8Q8NA92 274 aa7.57□□□□□ -1.2
CMSS1-201ENST00000421999 MS4A6AQ9H2W1 248 aa7.57□□□□□ -1.2
CMSS1-201ENST00000421999 IGSF10Q6WRI0 2623 aa7.57□□□□□ -1.2
CMSS1-201ENST00000421999 PPBPP02775 128 aa7.57□□□□□ -1.2
CMSS1-201ENST00000421999 ZNF414Q96IQ9 312 aa7.57□□□□□ -1.2
CMSS1-201ENST00000421999 C17orf77Q96MU5 243 aa7.57□□□□□ -1.2
CMSS1-201ENST00000421999 I3L2K1 104 aa7.56□□□□□ -1.2
CMSS1-201ENST00000421999 PSCAO43653 123 aa7.56□□□□□ -1.2
CMSS1-201ENST00000421999 AVPP01185 164 aa7.56□□□□□ -1.2
CMSS1-201ENST00000421999 PRR20EP86478 221 aa7.56□□□□□ -1.2
CMSS1-201ENST00000421999 PRR20CP86479 221 aa7.56□□□□□ -1.2
CMSS1-201ENST00000421999 PRR20DP86480 221 aa7.56□□□□□ -1.2
CMSS1-201ENST00000421999 PRR20BP86481 221 aa7.56□□□□□ -1.2
CMSS1-201ENST00000421999 PRR20AP86496 221 aa7.56□□□□□ -1.2
CMSS1-201ENST00000421999 FAM19A2Q8N3H0 131 aa7.56□□□□□ -1.2
CMSS1-201ENST00000421999 MRPL36Q9P0J6 103 aaKnown RBP7.56□□□□□ -1.2
CMSS1-201ENST00000421999 MGAM2Q2M2H8 2515 aa7.56□□□□□ -1.2
CMSS1-201ENST00000421999 IGHV1OR15-1A0A075B7D0 117 aa7.56□□□□□ -1.2
CMSS1-201ENST00000421999 ATP5LO75964 103 aa7.56□□□□□ -1.2
CMSS1-201ENST00000421999 CIRBPQ14011 172 aaKnown RBP7.56□□□□□ -1.2
CMSS1-201ENST00000421999 ATP6V0BQ99437 205 aa7.56□□□□□ -1.2
CMSS1-201ENST00000421999 MEGF9Q9H1U4 602 aa7.56□□□□□ -1.2
CMSS1-201ENST00000421999 RAI1Q7Z5J4 1906 aaPredicted RBP7.56□□□□□ -1.2
CMSS1-201ENST00000421999 TANC2Q9HCD6 1990 aa7.56□□□□□ -1.2
CMSS1-201ENST00000421999 ADARB2-AS1A8MUL3 147 aa7.56□□□□□ -1.2
CMSS1-201ENST00000421999 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.56□□□□□ -1.2
CMSS1-201ENST00000421999 M0R143 59 aa7.56□□□□□ -1.2
CMSS1-201ENST00000421999 GCSHP23434 173 aa7.56□□□□□ -1.2
CMSS1-201ENST00000421999 ATOH7Q8N100 152 aa7.56□□□□□ -1.2
CMSS1-201ENST00000421999 CYSLTR1Q9Y271 337 aa7.56□□□□□ -1.2
CMSS1-201ENST00000421999 LSM4Q9Y4Z0 139 aaKnown RBP7.56□□□□□ -1.2
CMSS1-201ENST00000421999 MAP1AP78559 2803 aaPredicted RBP7.56□□□□□ -1.2
CMSS1-201ENST00000421999 C9JQL5 133 aa7.56□□□□□ -1.2
CMSS1-201ENST00000421999 SLC25A2Q9BXI2 301 aa7.56□□□□□ -1.2
CMSS1-201ENST00000421999 DPH3P1Q9H4G8 78 aa7.56□□□□□ -1.2
CMSS1-201ENST00000421999 GGTLC3B5MD39 225 aa7.55□□□□□ -1.2
CMSS1-201ENST00000421999 FAM90A2PQ658T7 463 aa7.55□□□□□ -1.2
CMSS1-201ENST00000421999 CFAP161Q6P656 301 aa7.55□□□□□ -1.2
CMSS1-201ENST00000421999 TRAV8-6A0A0B4J262 113 aa7.55□□□□□ -1.2
CMSS1-201ENST00000421999 C2orf70A6NJV1 201 aa7.55□□□□□ -1.2
CMSS1-201ENST00000421999 PFN1P07737 140 aaKnown RBP7.55□□□□□ -1.2
CMSS1-201ENST00000421999 Q6ZSV7 163 aa7.55□□□□□ -1.2
CMSS1-201ENST00000421999 PRR25Q96S07 402 aa7.55□□□□□ -1.2
CMSS1-201ENST00000421999 ATRQ13535 2644 aa7.55□□□□□ -1.2
CMSS1-201ENST00000421999 IGKV1OR2-108A0A075B7D4 117 aa7.55□□□□□ -1.2
CMSS1-201ENST00000421999 CD300EQ496F6 205 aaPredicted RBP7.55□□□□□ -1.2
CMSS1-201ENST00000421999 OR11H2Q8NH07 326 aa7.55□□□□□ -1.2
CMSS1-201ENST00000421999 C1orf159Q96HA4 380 aa7.55□□□□□ -1.2
CMSS1-201ENST00000421999 C8orf49Q96NF6 230 aa7.55□□□□□ -1.2
CMSS1-201ENST00000421999 GAGE12JA6NER3 117 aa7.54□□□□□ -1.2
CMSS1-201ENST00000421999 H7C2G1 150 aa7.54□□□□□ -1.2
CMSS1-201ENST00000421999 TRBV12-3P01733 135 aa7.54□□□□□ -1.2
CMSS1-201ENST00000421999 AZU1P20160 251 aa7.54□□□□□ -1.2
CMSS1-201ENST00000421999 CDX1P47902 265 aaPredicted RBP7.54□□□□□ -1.2
CMSS1-201ENST00000421999 GAGE1Q13065 139 aa7.54□□□□□ -1.2
CMSS1-201ENST00000421999 GAGE4Q13068 117 aa7.54□□□□□ -1.2
CMSS1-201ENST00000421999 GAGE5Q13069 117 aa7.54□□□□□ -1.2
CMSS1-201ENST00000421999 VWC2Q2TAL6 325 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 134.6 ms