RNA–Protein interactions for RNA: ENST00000417172.5

CALD1-204, Transcript of caldesmon 1, humanhuman

TSL 5 BASIC

Gene CALD1, Length 1,915 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-204ENST00000417172 IMMP2LQ96T52 175 aa12.68□□□□□ -0.38
CALD1-204ENST00000417172 NDFIP1Q9BT67 221 aa12.68□□□□□ -0.38
CALD1-204ENST00000417172 SMIM27A0A1W2PRY6 76 aa12.67□□□□□ -0.38
CALD1-204ENST00000417172 SAP30O75446 220 aa12.67□□□□□ -0.38
CALD1-204ENST00000417172 PAFAH1B2P68402 229 aa12.67□□□□□ -0.38
CALD1-204ENST00000417172 KIR3DS1Q14943 382 aa12.67□□□□□ -0.38
CALD1-204ENST00000417172 COX8CQ7Z4L0 72 aa12.67□□□□□ -0.38
CALD1-204ENST00000417172 ZFP82Q8N141 532 aa12.67□□□□□ -0.38
CALD1-204ENST00000417172 OR2D3Q8NGH3 330 aa12.67□□□□□ -0.38
CALD1-204ENST00000417172 TMSB15BA0A087X1C1 80 aa12.66□□□□□ -0.38
CALD1-204ENST00000417172 IGKV3-20P01619 116 aa12.66□□□□□ -0.38
CALD1-204ENST00000417172 FAM162BQ5T6X4 162 aa12.66□□□□□ -0.38
CALD1-204ENST00000417172 SAMD13Q5VXD3 122 aa12.66□□□□□ -0.38
CALD1-204ENST00000417172 PRIMA1Q86XR5 153 aa12.66□□□□□ -0.38
CALD1-204ENST00000417172 NEU1Q99519 415 aa12.66□□□□□ -0.38
CALD1-204ENST00000417172 PF4P02776 101 aa12.66□□□□□ -0.38
CALD1-204ENST00000417172 GTSF1Q8WW33 167 aa12.66□□□□□ -0.38
CALD1-204ENST00000417172 CITED1Q99966 193 aa12.66□□□□□ -0.38
CALD1-204ENST00000417172 TSKUQ8WUA8 353 aa12.65□□□□□ -0.38
CALD1-204ENST00000417172 LINC00477Q96M19 166 aa12.65□□□□□ -0.38
CALD1-204ENST00000417172 ZNF256Q9Y2P7 627 aaPredicted RBP12.65□□□□□ -0.38
CALD1-204ENST00000417172 TRRAPQ9Y4A5 3859 aa12.65□□□□□ -0.38
CALD1-204ENST00000417172 HIGD1CA8MV81 97 aa12.64□□□□□ -0.39
CALD1-204ENST00000417172 DEFB131AP59861 70 aa12.64□□□□□ -0.39
CALD1-204ENST00000417172 ZFAND2AQ8N6M9 145 aa12.64□□□□□ -0.39
CALD1-204ENST00000417172 LINC00482Q8N8I6 264 aa12.64□□□□□ -0.39
CALD1-204ENST00000417172 A0A0J9YX75 114 aa12.64□□□□□ -0.39
CALD1-204ENST00000417172 KNCNA6PVL3 124 aa12.64□□□□□ -0.39
CALD1-204ENST00000417172 MRPL54Q6P161 138 aaKnown RBP12.64□□□□□ -0.39
CALD1-204ENST00000417172 NUP35Q8NFH5 326 aa12.64□□□□□ -0.39
CALD1-204ENST00000417172 SIGLEC8Q9NYZ4 499 aa12.64□□□□□ -0.39
CALD1-204ENST00000417172 C11orf21Q9P2W6 132 aa12.64□□□□□ -0.39
CALD1-204ENST00000417172 TRGC2P03986 189 aa12.63□□□□□ -0.39
CALD1-204ENST00000417172 ZNF575Q86XF7 245 aa12.63□□□□□ -0.39
CALD1-204ENST00000417172 FAM19A4Q96LR4 140 aa12.63□□□□□ -0.39
CALD1-204ENST00000417172 CT83Q5H943 113 aa12.62□□□□□ -0.39
CALD1-204ENST00000417172 PRR31Q5SQ13 230 aa12.62□□□□□ -0.39
CALD1-204ENST00000417172 APRG1Q8IVJ8 170 aa12.62□□□□□ -0.39
CALD1-204ENST00000417172 OR4B1Q8NGF8 309 aa12.62□□□□□ -0.39
CALD1-204ENST00000417172 BTF3L4Q96K17 158 aa12.62□□□□□ -0.39
CALD1-204ENST00000417172 MAP6D1Q9H9H5 199 aa12.62□□□□□ -0.39
CALD1-204ENST00000417172 A8MWL6 223 aa12.62□□□□□ -0.39
CALD1-204ENST00000417172 PGLYRP4Q96LB8 373 aa12.62□□□□□ -0.39
CALD1-204ENST00000417172 GSN-AS1Q9NRJ2 163 aa12.62□□□□□ -0.39
CALD1-204ENST00000417172 FABP5P3A8MUU1 101 aa12.61□□□□□ -0.39
CALD1-204ENST00000417172 ORM1P02763 201 aa12.61□□□□□ -0.39
CALD1-204ENST00000417172 TYMSP04818 313 aa12.61□□□□□ -0.39
CALD1-204ENST00000417172 ACTL10Q5JWF8 245 aa12.61□□□□□ -0.39
CALD1-204ENST00000417172 SPAG8Q99932 426 aaPredicted RBP12.61□□□□□ -0.39
CALD1-204ENST00000417172 SRD5A3Q9H8P0 318 aa12.61□□□□□ -0.39
CALD1-204ENST00000417172 NAT8BQ9UHF3 227 aa12.61□□□□□ -0.39
CALD1-204ENST00000417172 TRAV2A0A0B4J234 112 aa12.6□□□□□ -0.39
CALD1-204ENST00000417172 TMEM189A5PLL7 270 aa12.6□□□□□ -0.39
CALD1-204ENST00000417172 RNASE4P34096 147 aaKnown RBP12.6□□□□□ -0.39
CALD1-204ENST00000417172 EBLN2Q6P2I7 272 aa12.6□□□□□ -0.39
CALD1-204ENST00000417172 TPPP3Q9BW30 176 aa12.6□□□□□ -0.39
CALD1-204ENST00000417172 LENEPQ9Y5L5 61 aa12.6□□□□□ -0.39
CALD1-204ENST00000417172 NOTCH3Q9UM47 2321 aa12.6□□□□□ -0.39
CALD1-204ENST00000417172 OR4C46A6NHA9 309 aa12.6□□□□□ -0.39
CALD1-204ENST00000417172 M0R2Z0 102 aa12.6□□□□□ -0.39
CALD1-204ENST00000417172 IGLV1-51P01701 117 aa12.6□□□□□ -0.39
CALD1-204ENST00000417172 ODF3L2Q3SX64 289 aa12.6□□□□□ -0.39
CALD1-204ENST00000417172 IGKV3D-20A0A0C4DH25 116 aa12.59□□□□□ -0.39
CALD1-204ENST00000417172 GRIFINA4D1Z8 144 aa12.59□□□□□ -0.39
CALD1-204ENST00000417172 C1orf196B1AJZ1 125 aa12.59□□□□□ -0.39
CALD1-204ENST00000417172 GPX1P07203 203 aa12.59□□□□□ -0.39
CALD1-204ENST00000417172 ANKRD39Q53RE8 183 aa12.59□□□□□ -0.39
CALD1-204ENST00000417172 FOXI2Q6ZQN5 318 aa12.59□□□□□ -0.39
CALD1-204ENST00000417172 STAB1Q9NY15 2570 aa12.59□□□□□ -0.39
CALD1-204ENST00000417172 TRAV12-2A0A075B6T6 113 aa12.58□□□□□ -0.39
CALD1-204ENST00000417172 TRAV9-1A0A075B6T8 112 aa12.58□□□□□ -0.39
CALD1-204ENST00000417172 TRAV25A0A0B4J276 109 aa12.58□□□□□ -0.39
CALD1-204ENST00000417172 MUC21A0A0G2JKD1 596 aa12.58□□□□□ -0.39
CALD1-204ENST00000417172 MUC21A0A140T8X8 626 aa12.58□□□□□ -0.39
CALD1-204ENST00000417172 PHOX2AO14813 284 aa12.58□□□□□ -0.39
CALD1-204ENST00000417172 MUC21Q5SSG8 566 aa12.58□□□□□ -0.39
CALD1-204ENST00000417172 CRISP2P16562 243 aa12.58□□□□□ -0.4
CALD1-204ENST00000417172 FXYD7P58549 80 aa12.58□□□□□ -0.4
CALD1-204ENST00000417172 SPINK13Q1W4C9 94 aa12.58□□□□□ -0.4
CALD1-204ENST00000417172 FRZBQ92765 325 aa12.58□□□□□ -0.4
CALD1-204ENST00000417172 GFRA4Q9GZZ7 299 aa12.58□□□□□ -0.4
CALD1-204ENST00000417172 NAGKQ9UJ70 344 aa12.58□□□□□ -0.4
CALD1-204ENST00000417172 RBMY1BA6NDE4 496 aaKnown RBP12.57□□□□□ -0.4
CALD1-204ENST00000417172 RBMY1EA6NEQ0 496 aaKnown RBP12.57□□□□□ -0.4
CALD1-204ENST00000417172 RBMY1DP0C7P1 496 aaKnown RBP12.57□□□□□ -0.4
CALD1-204ENST00000417172 RAB4BP61018 213 aa12.57□□□□□ -0.4
CALD1-204ENST00000417172 FABP9Q0Z7S8 132 aa12.57□□□□□ -0.4
CALD1-204ENST00000417172 AMTNQ6UX39 209 aa12.57□□□□□ -0.4
CALD1-204ENST00000417172 KLLNB2CW77 178 aa12.56□□□□□ -0.4
CALD1-204ENST00000417172 LINC01559Q495D7 138 aa12.56□□□□□ -0.4
CALD1-204ENST00000417172 WFDC10AQ9H1F0 79 aa12.56□□□□□ -0.4
CALD1-204ENST00000417172 SNURFLB1AK76 121 aa12.56□□□□□ -0.4
CALD1-204ENST00000417172 H3BMM0 161 aa12.56□□□□□ -0.4
CALD1-204ENST00000417172 CD7P09564 240 aa12.56□□□□□ -0.4
CALD1-204ENST00000417172 ARMS2P0C7Q2 107 aa12.56□□□□□ -0.4
CALD1-204ENST00000417172 HLA-DRB4P13762 266 aa12.56□□□□□ -0.4
CALD1-204ENST00000417172 CAMPP49913 170 aa12.56□□□□□ -0.4
CALD1-204ENST00000417172 TRAPPC1Q9Y5R8 145 aa12.56□□□□□ -0.4
CALD1-204ENST00000417172 HLA-DRB4X5D2U9 266 aa12.56□□□□□ -0.4
CALD1-204ENST00000417172 TRAV12-3A0A0B4J271 114 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms