RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 IGKV2-29A2NJV5 120 aaPredicted RBP9.55□□□□□ -0.88
UBR4-205ENST00000417040 DYNAPQ8N1N2 210 aa9.55□□□□□ -0.88
UBR4-205ENST00000417040 IGHV1OR15-1A0A075B7D0 117 aa9.55□□□□□ -0.88
UBR4-205ENST00000417040 INAFM2P0DMQ5 153 aa9.55□□□□□ -0.88
UBR4-205ENST00000417040 KLF5Q13887 457 aaPredicted RBP9.54□□□□□ -0.88
UBR4-205ENST00000417040 BOD1L2Q8IYS8 172 aa9.54□□□□□ -0.88
UBR4-205ENST00000417040 TRBV25-1A0A075B6N4 114 aa9.54□□□□□ -0.88
UBR4-205ENST00000417040 PRSS29PA6NIE9 313 aa9.54□□□□□ -0.88
UBR4-205ENST00000417040 OOSP1A8MZH6 123 aa9.54□□□□□ -0.88
UBR4-205ENST00000417040 SPRNQ5BIV9 151 aa9.54□□□□□ -0.88
UBR4-205ENST00000417040 IGHG4P01861 327 aa9.54□□□□□ -0.88
UBR4-205ENST00000417040 UBL5Q9BZL1 73 aa9.54□□□□□ -0.88
UBR4-205ENST00000417040 TTTY13Q9BZ97 58 aa9.54□□□□□ -0.88
UBR4-205ENST00000417040 IL15RAQ13261 267 aa9.54□□□□□ -0.88
UBR4-205ENST00000417040 DEFB125Q8N687 156 aa9.54□□□□□ -0.88
UBR4-205ENST00000417040 TMEM190Q8WZ59 177 aa9.54□□□□□ -0.88
UBR4-205ENST00000417040 RPL39LQ96EH5 51 aaKnown RBP9.54□□□□□ -0.88
UBR4-205ENST00000417040 MGAMO43451 1857 aa9.53□□□□□ -0.88
UBR4-205ENST00000417040 SIVA1O15304 175 aa9.53□□□□□ -0.88
UBR4-205ENST00000417040 DEFB121Q5J5C9 76 aa9.53□□□□□ -0.88
UBR4-205ENST00000417040 UTF1Q5T230 341 aa9.53□□□□□ -0.88
UBR4-205ENST00000417040 SSC4DQ8WTU2 575 aa9.53□□□□□ -0.88
UBR4-205ENST00000417040 RP1L1Q8IWN7 2480 aaPredicted RBP9.53□□□□□ -0.88
UBR4-205ENST00000417040 FRMD6-AS1P0C7T7 363 aa9.53□□□□□ -0.88
UBR4-205ENST00000417040 TMEM14CQ9P0S9 112 aa9.53□□□□□ -0.88
UBR4-205ENST00000417040 IGHV4-4A0A075B6R2 117 aa9.53□□□□□ -0.88
UBR4-205ENST00000417040 ANKRD39Q53RE8 183 aa9.53□□□□□ -0.88
UBR4-205ENST00000417040 WIPF2Q8TF74 440 aaPredicted RBP9.53□□□□□ -0.88
UBR4-205ENST00000417040 IGHG3P01860 377 aa9.52□□□□□ -0.88
UBR4-205ENST00000417040 DEFB105AQ8NG35 78 aa9.52□□□□□ -0.88
UBR4-205ENST00000417040 IGLL5B9A064 214 aa9.52□□□□□ -0.89
UBR4-205ENST00000417040 IGLC1P0CG04 106 aa9.52□□□□□ -0.89
UBR4-205ENST00000417040 C11orf52Q96A22 123 aa9.52□□□□□ -0.89
UBR4-205ENST00000417040 RITA1Q96K30 269 aa9.52□□□□□ -0.89
UBR4-205ENST00000417040 DSCR8Q96T75 97 aa9.52□□□□□ -0.89
UBR4-205ENST00000417040 IGHV2-70DA0A0C4DH43 119 aa9.52□□□□□ -0.89
UBR4-205ENST00000417040 SHISA9B4DS77 424 aa9.52□□□□□ -0.89
UBR4-205ENST00000417040 DTX1Q86Y01 620 aa9.52□□□□□ -0.89
UBR4-205ENST00000417040 SMIM20Q8N5G0 67 aa9.52□□□□□ -0.89
UBR4-205ENST00000417040 THAP8Q8NA92 274 aa9.52□□□□□ -0.89
UBR4-205ENST00000417040 WFDC2Q14508 124 aa9.52□□□□□ -0.89
UBR4-205ENST00000417040 TAL2Q16559 108 aa9.52□□□□□ -0.89
UBR4-205ENST00000417040 B4DSR2 109 aa9.51□□□□□ -0.89
UBR4-205ENST00000417040 F5H768 121 aa9.51□□□□□ -0.89
UBR4-205ENST00000417040 ZNF561-AS1K7EIQ3 104 aa9.51□□□□□ -0.89
UBR4-205ENST00000417040 CRYGCP07315 174 aa9.51□□□□□ -0.89
UBR4-205ENST00000417040 BAALC-AS2P0C853 105 aa9.51□□□□□ -0.89
UBR4-205ENST00000417040 PRR20EP86478 221 aa9.51□□□□□ -0.89
UBR4-205ENST00000417040 PRR20CP86479 221 aa9.51□□□□□ -0.89
UBR4-205ENST00000417040 PRR20DP86480 221 aa9.51□□□□□ -0.89
UBR4-205ENST00000417040 PRR20BP86481 221 aa9.51□□□□□ -0.89
UBR4-205ENST00000417040 PRR20AP86496 221 aa9.51□□□□□ -0.89
UBR4-205ENST00000417040 LOXP28300 417 aaPredicted RBP9.51□□□□□ -0.89
UBR4-205ENST00000417040 NCOR1P1Q9H4R4 102 aa9.51□□□□□ -0.89
UBR4-205ENST00000417040 CFC1BP0CG36 223 aa9.51□□□□□ -0.89
UBR4-205ENST00000417040 CFC1P0CG37 223 aa9.51□□□□□ -0.89
UBR4-205ENST00000417040 RTTNQ86VV8 2226 aa9.51□□□□□ -0.89
UBR4-205ENST00000417040 PTPRZ1P23471 2315 aaPredicted RBP9.51□□□□□ -0.89
UBR4-205ENST00000417040 CSRP1P21291 193 aaKnown RBP9.5□□□□□ -0.89
UBR4-205ENST00000417040 HOXD3P31249 432 aaPredicted RBP9.5□□□□□ -0.89
UBR4-205ENST00000417040 MSRB1Q9NZV6 116 aa9.5□□□□□ -0.89
UBR4-205ENST00000417040 TMEM243Q9BU79 118 aa9.5□□□□□ -0.89
UBR4-205ENST00000417040 RBM3P98179 157 aaKnown RBP9.5□□□□□ -0.89
UBR4-205ENST00000417040 IGKV3D-7A0A0C4DH55 119 aa9.5□□□□□ -0.89
UBR4-205ENST00000417040 hADV29S1A0JD25 119 aa9.5□□□□□ -0.89
UBR4-205ENST00000417040 TCTEX1D4Q5JR98 221 aa9.5□□□□□ -0.89
UBR4-205ENST00000417040 LINC01619G3V211 115 aa9.49□□□□□ -0.89
UBR4-205ENST00000417040 FXYD2P54710 66 aa9.49□□□□□ -0.89
UBR4-205ENST00000417040 DAND5Q8N907 189 aa9.49□□□□□ -0.89
UBR4-205ENST00000417040 ZNF491Q8N8L2 437 aa9.49□□□□□ -0.89
UBR4-205ENST00000417040 ICE1Q9Y2F5 2266 aa9.49□□□□□ -0.89
UBR4-205ENST00000417040 IGLV3-9A0A075B6K5 115 aa9.49□□□□□ -0.89
UBR4-205ENST00000417040 RNF223E7ERA6 249 aa9.49□□□□□ -0.89
UBR4-205ENST00000417040 FGF23Q9GZV9 251 aaPredicted RBP9.49□□□□□ -0.89
UBR4-205ENST00000417040 WDR81Q562E7 1941 aa9.49□□□□□ -0.89
UBR4-205ENST00000417040 TAX1BP3O14907 124 aa9.49□□□□□ -0.89
UBR4-205ENST00000417040 MUSTN1Q8IVN3 82 aa9.48□□□□□ -0.89
UBR4-205ENST00000417040 NKAPP1Q8N9T2 125 aa9.48□□□□□ -0.89
UBR4-205ENST00000417040 FNDC1Q4ZHG4 1894 aaPredicted RBP9.48□□□□□ -0.89
UBR4-205ENST00000417040 PLXNA4Q9HCM2 1894 aa9.48□□□□□ -0.89
UBR4-205ENST00000417040 XCL1P47992 114 aa9.48□□□□□ -0.89
UBR4-205ENST00000417040 UBE2E1P51965 193 aa9.48□□□□□ -0.89
UBR4-205ENST00000417040 ZNF493Q6ZR52 646 aa9.48□□□□□ -0.89
UBR4-205ENST00000417040 Q9H8V8 135 aa9.48□□□□□ -0.89
UBR4-205ENST00000417040 TICRRQ7Z2Z1 1910 aa9.48□□□□□ -0.89
UBR4-205ENST00000417040 ZNF318Q5VUA4 2279 aa9.48□□□□□ -0.89
UBR4-205ENST00000417040 K7EM74 188 aa9.48□□□□□ -0.89
UBR4-205ENST00000417040 MRPL23Q16540 153 aaKnown RBP9.48□□□□□ -0.89
UBR4-205ENST00000417040 CMC4P56277 68 aaPredicted RBP9.48□□□□□ -0.89
UBR4-205ENST00000417040 TRAV13-2A0A0B4J235 113 aa9.48□□□□□ -0.89
UBR4-205ENST00000417040 FOXI2Q6ZQN5 318 aa9.48□□□□□ -0.89
UBR4-205ENST00000417040 PYGO2Q9BRQ0 406 aa9.48□□□□□ -0.89
UBR4-205ENST00000417040 Q8TCH9 128 aa9.47□□□□□ -0.89
UBR4-205ENST00000417040 IGLV3-1P01715 115 aa9.47□□□□□ -0.89
UBR4-205ENST00000417040 LINC01356Q8N9X3 169 aa9.47□□□□□ -0.89
UBR4-205ENST00000417040 IGF2BP2-AS1Q96M15 143 aa9.47□□□□□ -0.89
UBR4-205ENST00000417040 MYO7BQ6PIF6 2116 aa9.47□□□□□ -0.89
UBR4-205ENST00000417040 C5orf47Q569G3 176 aa9.47□□□□□ -0.89
UBR4-205ENST00000417040 PLXNA2O75051 1894 aa9.47□□□□□ -0.89
UBR4-205ENST00000417040 Q6ZQT7 251 aa9.46□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 106.5 ms