RNA–Protein interactions for RNA: ENST00000416417.5

USP4-204, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 2 BASIC

Gene USP4, Length 1,536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-204ENST00000416417 IBA57Q5T440 356 aaKnown RBP7.9□□□□□ -1.14
USP4-204ENST00000416417 MZT2BQ6NZ67 158 aa7.9□□□□□ -1.14
USP4-204ENST00000416417 C18orf15Q96N68 181 aa7.9□□□□□ -1.14
USP4-204ENST00000416417 WDR61Q9GZS3 305 aaKnown RBP7.9□□□□□ -1.14
USP4-204ENST00000416417 DNAH10OSP0CZ25 163 aa7.89□□□□□ -1.15
USP4-204ENST00000416417 ASAH1Q13510 395 aa7.89□□□□□ -1.15
USP4-204ENST00000416417 LYPD5Q6UWN5 251 aa7.89□□□□□ -1.15
USP4-204ENST00000416417 ZNF479Q96JC4 524 aa7.89□□□□□ -1.15
USP4-204ENST00000416417 SLC25A31Q9H0C2 315 aa7.89□□□□□ -1.15
USP4-204ENST00000416417 PRO0255Q9UI72 69 aa7.89□□□□□ -1.15
USP4-204ENST00000416417 HHLA3Q9XRX5 114 aa7.89□□□□□ -1.15
USP4-204ENST00000416417 ZNF415Q09FC8 603 aa7.88□□□□□ -1.15
USP4-204ENST00000416417 HYLS1Q96M11 299 aa7.88□□□□□ -1.15
USP4-204ENST00000416417 SMIM3Q9BZL3 60 aa7.88□□□□□ -1.15
USP4-204ENST00000416417 RPH3ALQ9UNE2 315 aa7.88□□□□□ -1.15
USP4-204ENST00000416417 TRGV4A0A0C4DH28 118 aa7.88□□□□□ -1.15
USP4-204ENST00000416417 NMBP08949 121 aa7.88□□□□□ -1.15
USP4-204ENST00000416417 UBE2L3P68036 154 aaKnown RBP7.88□□□□□ -1.15
USP4-204ENST00000416417 IFITM3Q01628 133 aa7.88□□□□□ -1.15
USP4-204ENST00000416417 TMEM183BQ1AE95 376 aa7.88□□□□□ -1.15
USP4-204ENST00000416417 FFAR4Q5NUL3 377 aa7.88□□□□□ -1.15
USP4-204ENST00000416417 WFDC10BQ8IUB3 73 aa7.88□□□□□ -1.15
USP4-204ENST00000416417 TMEM183AQ8IXX5 376 aa7.88□□□□□ -1.15
USP4-204ENST00000416417 ENKURQ8TC29 256 aa7.88□□□□□ -1.15
USP4-204ENST00000416417 MRPL32Q9BYC8 188 aaKnown RBP7.88□□□□□ -1.15
USP4-204ENST00000416417 NDUFA13Q9P0J0 144 aa7.88□□□□□ -1.15
USP4-204ENST00000416417 NAGKQ9UJ70 344 aa7.88□□□□□ -1.15
USP4-204ENST00000416417 LOC100131303A0A0U1RQF7 123 aa7.87□□□□□ -1.15
USP4-204ENST00000416417 CSN1S1P47710 185 aa7.87□□□□□ -1.15
USP4-204ENST00000416417 H2BFSP57053 126 aa7.87□□□□□ -1.15
USP4-204ENST00000416417 ZNF266Q14584 549 aa7.87□□□□□ -1.15
USP4-204ENST00000416417 NMES1Q9C002 83 aa7.87□□□□□ -1.15
USP4-204ENST00000416417 K7EQD1 137 aa7.86□□□□□ -1.15
USP4-204ENST00000416417 GNRH2O43555 120 aa7.86□□□□□ -1.15
USP4-204ENST00000416417 GYPEP15421 78 aa7.86□□□□□ -1.15
USP4-204ENST00000416417 MRPL23Q16540 153 aaKnown RBP7.86□□□□□ -1.15
USP4-204ENST00000416417 NEGR1Q7Z3B1 354 aa7.86□□□□□ -1.15
USP4-204ENST00000416417 ATP5SQ99766 215 aa7.86□□□□□ -1.15
USP4-204ENST00000416417 IGHV3-16A0A0C4DH30 117 aa7.85□□□□□ -1.15
USP4-204ENST00000416417 DIRC3C9JPN6 131 aa7.85□□□□□ -1.15
USP4-204ENST00000416417 C17orf112F2Z3M2 114 aa7.85□□□□□ -1.15
USP4-204ENST00000416417 F6UZH7 168 aa7.85□□□□□ -1.15
USP4-204ENST00000416417 INMT-MINDY4F8WBC2 141 aa7.85□□□□□ -1.15
USP4-204ENST00000416417 ERVFC1-1P60608 527 aa7.85□□□□□ -1.15
USP4-204ENST00000416417 PPP1R1CQ8WVI7 109 aa7.85□□□□□ -1.15
USP4-204ENST00000416417 WFDC1Q9HC57 220 aa7.85□□□□□ -1.15
USP4-204ENST00000416417 HSPB11Q9Y547 144 aa7.85□□□□□ -1.15
USP4-204ENST00000416417 PGPA6NDG6 321 aa7.84□□□□□ -1.15
USP4-204ENST00000416417 HMGB3O15347 200 aaKnown RBP7.84□□□□□ -1.15
USP4-204ENST00000416417 UPK1BO75841 260 aa7.84□□□□□ -1.15
USP4-204ENST00000416417 SRIP30626 198 aa7.84□□□□□ -1.15
USP4-204ENST00000416417 KRTAP10-1P60331 282 aa7.84□□□□□ -1.15
USP4-204ENST00000416417 GNG5P63218 68 aa7.84□□□□□ -1.15
USP4-204ENST00000416417 HAMPP81172 84 aa7.84□□□□□ -1.15
USP4-204ENST00000416417 Q6AWC8 147 aa7.84□□□□□ -1.15
USP4-204ENST00000416417 FAM159AQ6UWV7 190 aa7.84□□□□□ -1.15
USP4-204ENST00000416417 SGK494Q96LW2 274 aa7.84□□□□□ -1.15
USP4-204ENST00000416417 KCNIP2Q9NS61 270 aa7.84□□□□□ -1.15
USP4-204ENST00000416417 LY96Q9Y6Y9 160 aa7.84□□□□□ -1.15
USP4-204ENST00000416417 A0A087WTM6 91 aa7.83□□□□□ -1.16
USP4-204ENST00000416417 TRAV8-1A0A0A6YYK1 113 aa7.83□□□□□ -1.16
USP4-204ENST00000416417 RBAKDNA6NC62 111 aa7.83□□□□□ -1.16
USP4-204ENST00000416417 XGP55808 180 aa7.83□□□□□ -1.16
USP4-204ENST00000416417 SLAQ13239 276 aa7.83□□□□□ -1.16
USP4-204ENST00000416417 GOLT1AQ6ZVE7 132 aa7.83□□□□□ -1.16
USP4-204ENST00000416417 OR10G4Q8NGN3 311 aa7.83□□□□□ -1.16
USP4-204ENST00000416417 S100ZQ8WXG8 99 aa7.83□□□□□ -1.16
USP4-204ENST00000416417 TVP23CQ96ET8 276 aa7.83□□□□□ -1.16
USP4-204ENST00000416417 PGPEP1Q9NXJ5 209 aa7.83□□□□□ -1.16
USP4-204ENST00000416417 TRGV11A0A075B6L2 103 aa7.83□□□□□ -1.16
USP4-204ENST00000416417 TRBV7-9A0A0J9YWB2 115 aa7.83□□□□□ -1.16
USP4-204ENST00000416417 EPM2AB3EWF7 344 aa7.83□□□□□ -1.16
USP4-204ENST00000416417 EREGO14944 169 aa7.83□□□□□ -1.16
USP4-204ENST00000416417 MPC2O95563 127 aa7.83□□□□□ -1.16
USP4-204ENST00000416417 RPL12P30050 165 aaKnown RBP7.83□□□□□ -1.16
USP4-204ENST00000416417 CYCSP99999 105 aaKnown RBP7.83□□□□□ -1.16
USP4-204ENST00000416417 KHDC3LQ587J8 217 aa7.83□□□□□ -1.16
USP4-204ENST00000416417 LYPD1Q8N2G4 141 aa7.83□□□□□ -1.16
USP4-204ENST00000416417 SCGB1C1Q8TD33 95 aa7.83□□□□□ -1.16
USP4-204ENST00000416417 PCNPQ8WW12 178 aaKnown RBP7.83□□□□□ -1.16
USP4-204ENST00000416417 RASL10AQ92737 203 aa7.83□□□□□ -1.16
USP4-204ENST00000416417 MSRB1Q9NZV6 116 aa7.83□□□□□ -1.16
USP4-204ENST00000416417 MBD2Q9UBB5 411 aa7.83□□□□□ -1.16
USP4-204ENST00000416417 SSNA1O43805 119 aa7.82□□□□□ -1.16
USP4-204ENST00000416417 IFNA5P01569 189 aa7.82□□□□□ -1.16
USP4-204ENST00000416417 RAB2AP61019 212 aa7.82□□□□□ -1.16
USP4-204ENST00000416417 IQCF2Q8IXL9 164 aa7.82□□□□□ -1.16
USP4-204ENST00000416417 OR4C5Q8NGB2 326 aa7.82□□□□□ -1.16
USP4-204ENST00000416417 SPXQ9BT56 116 aa7.82□□□□□ -1.16
USP4-204ENST00000416417 OTORQ9NRC9 128 aa7.82□□□□□ -1.16
USP4-204ENST00000416417 FAT1Q14517 4588 aa7.81□□□□□ -1.16
USP4-204ENST00000416417 TRAV4A0A0B4J268 109 aa7.81□□□□□ -1.16
USP4-204ENST00000416417 SMR3BP02814 79 aaPredicted RBP7.81□□□□□ -1.16
USP4-204ENST00000416417 TYMSP04818 313 aa7.81□□□□□ -1.16
USP4-204ENST00000416417 TAS2R45P59539 299 aa7.81□□□□□ -1.16
USP4-204ENST00000416417 CMTM2Q8TAZ6 248 aa7.81□□□□□ -1.16
USP4-204ENST00000416417 HERC1Q15751 4861 aa7.8□□□□□ -1.16
USP4-204ENST00000416417 TRAV9-2A0A087WT02 112 aa7.8□□□□□ -1.16
USP4-204ENST00000416417 IGHV3-73A0A0B4J1V6 119 aa7.8□□□□□ -1.16
USP4-204ENST00000416417 C9JCJ5 164 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms