RNA–Protein interactions for RNA: ENST00000414675.6

LRCH3-202, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRCH3, Length 2,299 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-202ENST00000414675 MRPL53Q96EL3 112 aaKnown RBP11.71□□□□□ -0.54
LRCH3-202ENST00000414675 C16orf92Q96LL3 132 aa11.71□□□□□ -0.54
LRCH3-202ENST00000414675 Q96MF0 132 aa11.71□□□□□ -0.54
LRCH3-202ENST00000414675 UQCR10Q9UDW1 63 aa11.71□□□□□ -0.54
LRCH3-202ENST00000414675 ZNF580Q9UK33 172 aa11.71□□□□□ -0.54
LRCH3-202ENST00000414675 RPLP1P05386 114 aaKnown RBP11.7□□□□□ -0.54
LRCH3-202ENST00000414675 BMI1P35226 326 aa11.7□□□□□ -0.54
LRCH3-202ENST00000414675 TM4SF20Q53R12 229 aa11.7□□□□□ -0.54
LRCH3-202ENST00000414675 LRRC75A-AS1Q8N1F1 130 aa11.7□□□□□ -0.54
LRCH3-202ENST00000414675 CLEC5AQ9NY25 188 aa11.7□□□□□ -0.54
LRCH3-202ENST00000414675 HELZ2Q9BYK8 2649 aaKnown RBP11.7□□□□□ -0.54
LRCH3-202ENST00000414675 ITPR3Q14573 2671 aa11.7□□□□□ -0.54
LRCH3-202ENST00000414675 FABP5P3A8MUU1 101 aa11.69□□□□□ -0.54
LRCH3-202ENST00000414675 SOCS3O14543 225 aa11.69□□□□□ -0.54
LRCH3-202ENST00000414675 ORM1P02763 201 aa11.69□□□□□ -0.54
LRCH3-202ENST00000414675 IGLC6P0CF74 106 aa11.69□□□□□ -0.54
LRCH3-202ENST00000414675 DEFB1P60022 68 aa11.69□□□□□ -0.54
LRCH3-202ENST00000414675 HIST2H2BCQ6DN03 193 aa11.69□□□□□ -0.54
LRCH3-202ENST00000414675 C11orf21Q9P2W6 132 aa11.69□□□□□ -0.54
LRCH3-202ENST00000414675 LINC00614P0C842 121 aa11.69□□□□□ -0.54
LRCH3-202ENST00000414675 IGLC3P0DOY3 106 aa11.69□□□□□ -0.54
LRCH3-202ENST00000414675 ZNF138P52744 262 aa11.69□□□□□ -0.54
LRCH3-202ENST00000414675 Q6YL49 198 aa11.69□□□□□ -0.54
LRCH3-202ENST00000414675 Q6ZN92 141 aa11.69□□□□□ -0.54
LRCH3-202ENST00000414675 Q6ZQT7 251 aa11.69□□□□□ -0.54
LRCH3-202ENST00000414675 TMEM70Q9BUB7 260 aa11.69□□□□□ -0.54
LRCH3-202ENST00000414675 VPREB3Q9UKI3 123 aa11.69□□□□□ -0.54
LRCH3-202ENST00000414675 IGHV1-24A0A0C4DH33 117 aa11.68□□□□□ -0.54
LRCH3-202ENST00000414675 A0A1B0GW15 77 aa11.68□□□□□ -0.54
LRCH3-202ENST00000414675 C2orf70A6NJV1 201 aa11.68□□□□□ -0.54
LRCH3-202ENST00000414675 TMEM78Q5T7P6 136 aa11.68□□□□□ -0.54
LRCH3-202ENST00000414675 ZNF493Q6ZR52 646 aa11.68□□□□□ -0.54
LRCH3-202ENST00000414675 C9orf47Q6ZRZ4 202 aa11.68□□□□□ -0.54
LRCH3-202ENST00000414675 C9orf139Q6ZV77 190 aa11.68□□□□□ -0.54
LRCH3-202ENST00000414675 FER1L6-AS1Q8NA97 138 aa11.68□□□□□ -0.54
LRCH3-202ENST00000414675 PEF1Q9UBV8 284 aaKnown RBP11.68□□□□□ -0.54
LRCH3-202ENST00000414675 IGHV7-4-1A0A0J9YVY3 117 aa11.67□□□□□ -0.54
LRCH3-202ENST00000414675 HNRNPA3P51991 378 aaKnown RBP11.67□□□□□ -0.54
LRCH3-202ENST00000414675 RPS20P60866 119 aaKnown RBP11.67□□□□□ -0.54
LRCH3-202ENST00000414675 SRSF2Q01130 221 aaKnown RBP11.67□□□□□ -0.54
LRCH3-202ENST00000414675 RHPN1-AS1Q9BWJ2 59 aa11.67□□□□□ -0.54
LRCH3-202ENST00000414675 CCDC168Q8NDH2 2452 aa11.67□□□□□ -0.54
LRCH3-202ENST00000414675 LEPROTL1O95214 131 aa11.67□□□□□ -0.54
LRCH3-202ENST00000414675 G0S2P27469 103 aa11.67□□□□□ -0.54
LRCH3-202ENST00000414675 MAJINQ3KP22 176 aa11.67□□□□□ -0.54
LRCH3-202ENST00000414675 ZNF738Q8NE65 137 aa11.67□□□□□ -0.54
LRCH3-202ENST00000414675 IGKV3-7A0A075B6H7 116 aa11.66□□□□□ -0.54
LRCH3-202ENST00000414675 TRAV9-2A0A087WT02 112 aa11.66□□□□□ -0.54
LRCH3-202ENST00000414675 IGKV3D-20A0A0C4DH25 116 aa11.66□□□□□ -0.54
LRCH3-202ENST00000414675 HOXA3O43365 443 aaPredicted RBP11.66□□□□□ -0.54
LRCH3-202ENST00000414675 LINC01559Q495D7 138 aa11.66□□□□□ -0.54
LRCH3-202ENST00000414675 AMN1Q8IY45 258 aa11.66□□□□□ -0.54
LRCH3-202ENST00000414675 CSN3P07498 182 aa11.66□□□□□ -0.54
LRCH3-202ENST00000414675 FOXE3Q13461 319 aa11.66□□□□□ -0.54
LRCH3-202ENST00000414675 PRR9Q5T870 116 aa11.66□□□□□ -0.54
LRCH3-202ENST00000414675 ZNF702PQ9H963 129 aa11.66□□□□□ -0.54
LRCH3-202ENST00000414675 DAZ1Q9NQZ3 744 aaKnown RBP11.66□□□□□ -0.54
LRCH3-202ENST00000414675 MSRB1Q9NZV6 116 aa11.66□□□□□ -0.54
LRCH3-202ENST00000414675 RPL11P62913 178 aaKnown RBP11.65□□□□□ -0.54
LRCH3-202ENST00000414675 SONP18583 2426 aaKnown RBP11.65□□□□□ -0.54
LRCH3-202ENST00000414675 C20orf202A1L168 122 aa11.65□□□□□ -0.55
LRCH3-202ENST00000414675 FAM104BQ5XKR9 115 aa11.65□□□□□ -0.55
LRCH3-202ENST00000414675 SMPXQ9UHP9 88 aa11.65□□□□□ -0.55
LRCH3-202ENST00000414675 MYO9AB2RTY4 2548 aa11.64□□□□□ -0.55
LRCH3-202ENST00000414675 ZNF25P17030 456 aaPredicted RBP11.64□□□□□ -0.55
LRCH3-202ENST00000414675 SRD5A1P18405 259 aa11.64□□□□□ -0.55
LRCH3-202ENST00000414675 TWIST1Q15672 202 aa11.64□□□□□ -0.55
LRCH3-202ENST00000414675 DUX5Q96PT3 197 aa11.64□□□□□ -0.55
LRCH3-202ENST00000414675 PPP1R14DQ9NXH3 145 aa11.64□□□□□ -0.55
LRCH3-202ENST00000414675 GCN1Q92616 2671 aaKnown RBP11.64□□□□□ -0.55
LRCH3-202ENST00000414675 OR5AL1P0C617 328 aa11.63□□□□□ -0.55
LRCH3-202ENST00000414675 HIST1H1AQ02539 215 aaPredicted RBP11.63□□□□□ -0.55
LRCH3-202ENST00000414675 LINC00173Q6ZV60 143 aa11.63□□□□□ -0.55
LRCH3-202ENST00000414675 SPATA12Q7Z6I5 190 aa11.63□□□□□ -0.55
LRCH3-202ENST00000414675 TIMM8BQ9Y5J9 83 aaPredicted RBP11.63□□□□□ -0.55
LRCH3-202ENST00000414675 OR4C46A6NHA9 309 aa11.63□□□□□ -0.55
LRCH3-202ENST00000414675 D6R8Y8 96 aa11.63□□□□□ -0.55
LRCH3-202ENST00000414675 F6UB75 175 aa11.63□□□□□ -0.55
LRCH3-202ENST00000414675 SYS1-DBNDD2H3BUS1 97 aa11.63□□□□□ -0.55
LRCH3-202ENST00000414675 COL5A1-AS1Q5SY13 56 aa11.63□□□□□ -0.55
LRCH3-202ENST00000414675 TMEM89A2RUT3 159 aa11.62□□□□□ -0.55
LRCH3-202ENST00000414675 FLNAP21333 2647 aaKnown RBP11.62□□□□□ -0.55
LRCH3-202ENST00000414675 FAM106AQ4KMX7 169 aa11.62□□□□□ -0.55
LRCH3-202ENST00000414675 MRPL51Q4U2R6 128 aaKnown RBP11.62□□□□□ -0.55
LRCH3-202ENST00000414675 CYB5R2Q6BCY4 276 aa11.62□□□□□ -0.55
LRCH3-202ENST00000414675 MAP1LC3CQ9BXW4 147 aa11.62□□□□□ -0.55
LRCH3-202ENST00000414675 CNFNQ9BYD5 112 aa11.62□□□□□ -0.55
LRCH3-202ENST00000414675 U3KQK5 164 aa11.62□□□□□ -0.55
LRCH3-202ENST00000414675 J3KRW8 73 aa11.62□□□□□ -0.55
LRCH3-202ENST00000414675 K7EMT4 169 aa11.62□□□□□ -0.55
LRCH3-202ENST00000414675 IGLL1P15814 213 aa11.62□□□□□ -0.55
LRCH3-202ENST00000414675 WFDC11Q8NEX6 87 aa11.62□□□□□ -0.55
LRCH3-202ENST00000414675 LAMTOR2Q9Y2Q5 125 aa11.62□□□□□ -0.55
LRCH3-202ENST00000414675 CRXO43186 299 aaPredicted RBP11.61□□□□□ -0.55
LRCH3-202ENST00000414675 DMRTA1Q5VZB9 504 aa11.61□□□□□ -0.55
LRCH3-202ENST00000414675 PRSS57Q6UWY2 283 aa11.61□□□□□ -0.55
LRCH3-202ENST00000414675 FA2HQ7L5A8 372 aa11.61□□□□□ -0.55
LRCH3-202ENST00000414675 ZFAND2AQ8N6M9 145 aa11.61□□□□□ -0.55
LRCH3-202ENST00000414675 PRSS3P2Q8NHM4 247 aa11.61□□□□□ -0.55
LRCH3-202ENST00000414675 HSPB8Q9UJY1 196 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms