RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 PMAIP1Q13794 54 aa7.33□□□□□ -1.24
SNHG3-201ENST00000413987 H1FXQ92522 213 aaKnown RBP7.33□□□□□ -1.24
SNHG3-201ENST00000413987 MRPL32Q9BYC8 188 aaKnown RBP7.33□□□□□ -1.24
SNHG3-201ENST00000413987 A0A1B0GXF2 115 aa7.33□□□□□ -1.24
SNHG3-201ENST00000413987 GGTLC3B5MD39 225 aa7.33□□□□□ -1.24
SNHG3-201ENST00000413987 LYNX1G3V0Z9 82 aa7.33□□□□□ -1.24
SNHG3-201ENST00000413987 LYNX1P0DP58 116 aa7.33□□□□□ -1.24
SNHG3-201ENST00000413987 SEC61BP60468 96 aaKnown RBP7.33□□□□□ -1.24
SNHG3-201ENST00000413987 TNFAIP6P98066 277 aaPredicted RBP7.33□□□□□ -1.24
SNHG3-201ENST00000413987 LRRC29Q8WV35 223 aa7.33□□□□□ -1.24
SNHG3-201ENST00000413987 FAM168AQ92567 244 aa7.33□□□□□ -1.24
SNHG3-201ENST00000413987 URB1-AS1Q96HZ7 61 aa7.33□□□□□ -1.24
SNHG3-201ENST00000413987 OVOL2Q9BRP0 275 aa7.33□□□□□ -1.24
SNHG3-201ENST00000413987 SSBP3Q9BWW4 388 aaPredicted RBP7.33□□□□□ -1.24
SNHG3-201ENST00000413987 ZNF355PQ9NSJ1 428 aa7.33□□□□□ -1.24
SNHG3-201ENST00000413987 PRR31Q5SQ13 230 aa7.32□□□□□ -1.24
SNHG3-201ENST00000413987 Q6ZVQ6 151 aa7.32□□□□□ -1.24
SNHG3-201ENST00000413987 Q9HAA7 133 aa7.32□□□□□ -1.24
SNHG3-201ENST00000413987 A0A087WZ39 114 aa7.32□□□□□ -1.24
SNHG3-201ENST00000413987 HIGD1CA8MV81 97 aa7.32□□□□□ -1.24
SNHG3-201ENST00000413987 LINC01545Q5VT33 79 aa7.32□□□□□ -1.24
SNHG3-201ENST00000413987 DEFB108BQ8NET1 73 aa7.32□□□□□ -1.24
SNHG3-201ENST00000413987 OR1N2Q8NGR9 330 aa7.32□□□□□ -1.24
SNHG3-201ENST00000413987 OR10AG1Q8NH19 301 aa7.32□□□□□ -1.24
SNHG3-201ENST00000413987 VSTM2AQ8TAG5 236 aa7.32□□□□□ -1.24
SNHG3-201ENST00000413987 DYNLRB1Q9NP97 96 aa7.32□□□□□ -1.24
SNHG3-201ENST00000413987 DYSFO75923 2080 aa7.32□□□□□ -1.24
SNHG3-201ENST00000413987 DOPEY2Q9Y3R5 2298 aa7.32□□□□□ -1.24
SNHG3-201ENST00000413987 PTPN13Q12923 2485 aa7.31□□□□□ -1.24
SNHG3-201ENST00000413987 EVI2AP22794 236 aa7.31□□□□□ -1.24
SNHG3-201ENST00000413987 PIK3CD-AS1Q5SR53 167 aa7.31□□□□□ -1.24
SNHG3-201ENST00000413987 C2orf91Q6ZV80 131 aa7.31□□□□□ -1.24
SNHG3-201ENST00000413987 SSX8Q7RTT4 187 aa7.31□□□□□ -1.24
SNHG3-201ENST00000413987 LINC00482Q8N8I6 264 aa7.31□□□□□ -1.24
SNHG3-201ENST00000413987 SRSF12Q8WXF0 261 aaKnown RBP7.31□□□□□ -1.24
SNHG3-201ENST00000413987 TMEM101Q96IK0 257 aa7.31□□□□□ -1.24
SNHG3-201ENST00000413987 ESM1Q9NQ30 184 aa7.31□□□□□ -1.24
SNHG3-201ENST00000413987 AMMECR1Q9Y4X0 333 aaPredicted RBP7.31□□□□□ -1.24
SNHG3-201ENST00000413987 APCP25054 2843 aa7.31□□□□□ -1.24
SNHG3-201ENST00000413987 A0A0U1RQV1 116 aa7.31□□□□□ -1.24
SNHG3-201ENST00000413987 FABP5P3A8MUU1 101 aa7.31□□□□□ -1.24
SNHG3-201ENST00000413987 PRTN3P24158 256 aa7.31□□□□□ -1.24
SNHG3-201ENST00000413987 FASNP49327 2511 aaKnown RBP7.31□□□□□ -1.24
SNHG3-201ENST00000413987 MEF2CQ06413 473 aaPredicted RBP7.31□□□□□ -1.24
SNHG3-201ENST00000413987 HSD52Q0P140 79 aa7.31□□□□□ -1.24
SNHG3-201ENST00000413987 MAPKAPK5-AS1Q8N8E1 139 aa7.31□□□□□ -1.24
SNHG3-201ENST00000413987 ZNF418Q8TF45 676 aaPredicted RBP7.31□□□□□ -1.24
SNHG3-201ENST00000413987 CCL17Q92583 94 aa7.31□□□□□ -1.24
SNHG3-201ENST00000413987 TP73-AS1Q9UF72 201 aa7.31□□□□□ -1.24
SNHG3-201ENST00000413987 RAI1Q7Z5J4 1906 aaPredicted RBP7.3□□□□□ -1.24
SNHG3-201ENST00000413987 A8MWL6 223 aa7.3□□□□□ -1.24
SNHG3-201ENST00000413987 F6UB75 175 aa7.3□□□□□ -1.24
SNHG3-201ENST00000413987 H3BUT2 72 aa7.3□□□□□ -1.24
SNHG3-201ENST00000413987 MOSP00540 346 aa7.3□□□□□ -1.24
SNHG3-201ENST00000413987 ACP7Q6ZNF0 438 aa7.3□□□□□ -1.24
SNHG3-201ENST00000413987 SLC25A33Q9BSK2 321 aa7.3□□□□□ -1.24
SNHG3-201ENST00000413987 PRSS22Q9GZN4 317 aa7.3□□□□□ -1.24
SNHG3-201ENST00000413987 C19orf73Q9NVV2 129 aa7.3□□□□□ -1.24
SNHG3-201ENST00000413987 DSCAMO60469 2012 aa7.3□□□□□ -1.24
SNHG3-201ENST00000413987 HECTD1Q9ULT8 2610 aa7.3□□□□□ -1.24
SNHG3-201ENST00000413987 ZNF469Q96JG9 3925 aaPredicted RBP7.3□□□□□ -1.24
SNHG3-201ENST00000413987 hADV38S2A0JD32 116 aa7.29□□□□□ -1.24
SNHG3-201ENST00000413987 J3QR89 54 aa7.29□□□□□ -1.24
SNHG3-201ENST00000413987 PEX7O00628 323 aa7.29□□□□□ -1.24
SNHG3-201ENST00000413987 LINC00173Q6ZV60 143 aa7.29□□□□□ -1.24
SNHG3-201ENST00000413987 CD177Q8N6Q3 437 aa7.29□□□□□ -1.24
SNHG3-201ENST00000413987 OR4X2Q8NGF9 303 aa7.29□□□□□ -1.24
SNHG3-201ENST00000413987 GFRA4Q9GZZ7 299 aa7.29□□□□□ -1.24
SNHG3-201ENST00000413987 IGKV1D-17A0A075B6S4 117 aa7.29□□□□□ -1.24
SNHG3-201ENST00000413987 UBE2L3P68036 154 aaKnown RBP7.29□□□□□ -1.24
SNHG3-201ENST00000413987 ZNRF1Q8ND25 227 aa7.29□□□□□ -1.24
SNHG3-201ENST00000413987 OR11H6Q8NGC7 330 aa7.29□□□□□ -1.24
SNHG3-201ENST00000413987 SPCS1Q9Y6A9 102 aa7.29□□□□□ -1.24
SNHG3-201ENST00000413987 A0A1W2PPM0 123 aa7.28□□□□□ -1.24
SNHG3-201ENST00000413987 GAGE12JA6NER3 117 aa7.28□□□□□ -1.24
SNHG3-201ENST00000413987 SRRM5B3KS81 715 aa7.28□□□□□ -1.24
SNHG3-201ENST00000413987 GAGE7O76087 117 aa7.28□□□□□ -1.24
SNHG3-201ENST00000413987 GAGE12FP0CL80 117 aa7.28□□□□□ -1.24
SNHG3-201ENST00000413987 GAGE12GP0CL81 117 aa7.28□□□□□ -1.24
SNHG3-201ENST00000413987 GAGE12IP0CL82 117 aa7.28□□□□□ -1.24
SNHG3-201ENST00000413987 IGHV4-31P0DP07 118 aa7.28□□□□□ -1.24
SNHG3-201ENST00000413987 FABP2P12104 132 aa7.28□□□□□ -1.24
SNHG3-201ENST00000413987 LINC00205P59089 165 aa7.28□□□□□ -1.24
SNHG3-201ENST00000413987 GAGE4Q13068 117 aa7.28□□□□□ -1.24
SNHG3-201ENST00000413987 FAM53AQ6NSI3 398 aaPredicted RBP7.28□□□□□ -1.24
SNHG3-201ENST00000413987 SPATA25Q9BR10 227 aa7.28□□□□□ -1.24
SNHG3-201ENST00000413987 RPP21Q9H633 154 aaKnown RBP7.28□□□□□ -1.24
SNHG3-201ENST00000413987 TMEM14BQ9NUH8 114 aa7.28□□□□□ -1.24
SNHG3-201ENST00000413987 ZNF257Q9Y2Q1 563 aa7.28□□□□□ -1.24
SNHG3-201ENST00000413987 ZANQ9Y493 2812 aa7.28□□□□□ -1.24
SNHG3-201ENST00000413987 COL8A2P25067 703 aa7.28□□□□□ -1.24
SNHG3-201ENST00000413987 CSN1S1P47710 185 aa7.28□□□□□ -1.24
SNHG3-201ENST00000413987 FOXA3P55318 350 aaPredicted RBP7.28□□□□□ -1.24
SNHG3-201ENST00000413987 ZNF329Q86UD4 541 aa7.28□□□□□ -1.24
SNHG3-201ENST00000413987 Q8TCH9 128 aa7.28□□□□□ -1.24
SNHG3-201ENST00000413987 FMC1Q96HJ9 113 aa7.28□□□□□ -1.24
SNHG3-201ENST00000413987 KIR2DL4Q99706 377 aa7.28□□□□□ -1.24
SNHG3-201ENST00000413987 C7orf69Q9H7B7 122 aa7.28□□□□□ -1.24
SNHG3-201ENST00000413987 ITPR2Q14571 2701 aa7.27□□□□□ -1.24
SNHG3-201ENST00000413987 IGHV3-43A0A0B4J1X8 118 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms