RNA–Protein interactions for RNA: ENST00000413296.1

CBX1P3-201, Transcript of chromobox 1 pseudogene 3, humanhuman

BASIC

Gene CBX1P3, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P3-201ENST00000413296 SOSTDC1Q6X4U4 206 aa3.95□□□□□ -1.78
CBX1P3-201ENST00000413296 CLDND2Q8NHS1 167 aa3.95□□□□□ -1.78
CBX1P3-201ENST00000413296 DIRC1Q969H9 104 aa3.95□□□□□ -1.78
CBX1P3-201ENST00000413296 RBMXL1Q96E39 390 aaKnown RBP3.95□□□□□ -1.78
CBX1P3-201ENST00000413296 SAR1AQ9NR31 198 aa3.95□□□□□ -1.78
CBX1P3-201ENST00000413296 DNAJC15Q9Y5T4 150 aa3.95□□□□□ -1.78
CBX1P3-201ENST00000413296 CHCHD2Q9Y6H1 151 aaPredicted RBP3.95□□□□□ -1.78
CBX1P3-201ENST00000413296 FRYQ5TBA9 3013 aa3.95□□□□□ -1.78
CBX1P3-201ENST00000413296 DSCAMO60469 2012 aa3.95□□□□□ -1.78
CBX1P3-201ENST00000413296 LCTP09848 1927 aa3.95□□□□□ -1.78
CBX1P3-201ENST00000413296 PTPN13Q12923 2485 aa3.95□□□□□ -1.78
CBX1P3-201ENST00000413296 LRP4O75096 1905 aa3.94□□□□□ -1.78
CBX1P3-201ENST00000413296 TRBV20-1A0A075B6N2 111 aa3.94□□□□□ -1.78
CBX1P3-201ENST00000413296 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.94□□□□□ -1.78
CBX1P3-201ENST00000413296 CYSRT1A8MQ03 144 aa3.94□□□□□ -1.78
CBX1P3-201ENST00000413296 H3BMM0 161 aa3.94□□□□□ -1.78
CBX1P3-201ENST00000413296 GEMIN2O14893 280 aaKnown RBP3.94□□□□□ -1.78
CBX1P3-201ENST00000413296 IGKV2-30P06310 120 aa3.94□□□□□ -1.78
CBX1P3-201ENST00000413296 GZMBP10144 247 aa3.94□□□□□ -1.78
CBX1P3-201ENST00000413296 ZNF19P17023 458 aa3.94□□□□□ -1.78
CBX1P3-201ENST00000413296 ZNF90Q03938 601 aa3.94□□□□□ -1.78
CBX1P3-201ENST00000413296 MIAQ16674 131 aa3.94□□□□□ -1.78
CBX1P3-201ENST00000413296 KRTAP15-1Q3LI76 137 aa3.94□□□□□ -1.78
CBX1P3-201ENST00000413296 Q56UQ5 140 aa3.94□□□□□ -1.78
CBX1P3-201ENST00000413296 PYY3Q5JQD4 70 aa3.94□□□□□ -1.78
CBX1P3-201ENST00000413296 UBE2WQ96B02 151 aa3.94□□□□□ -1.78
CBX1P3-201ENST00000413296 AGPAT4-IT1Q9H0P7 198 aa3.94□□□□□ -1.78
CBX1P3-201ENST00000413296 SLC35B3Q9H1N7 401 aa3.94□□□□□ -1.78
CBX1P3-201ENST00000413296 ZNF355PQ9NSJ1 428 aa3.94□□□□□ -1.78
CBX1P3-201ENST00000413296 OR5V1Q9UGF6 321 aa3.94□□□□□ -1.78
CBX1P3-201ENST00000413296 LSM2Q9Y333 95 aaKnown RBP3.94□□□□□ -1.78
CBX1P3-201ENST00000413296 NOP16Q9Y3C1 178 aaKnown RBP3.94□□□□□ -1.78
CBX1P3-201ENST00000413296 TRAPPC1Q9Y5R8 145 aa3.94□□□□□ -1.78
CBX1P3-201ENST00000413296 ICOSQ9Y6W8 199 aa3.94□□□□□ -1.78
CBX1P3-201ENST00000413296 ITPR1Q14643 2758 aa3.94□□□□□ -1.78
CBX1P3-201ENST00000413296 ITPR3Q14573 2671 aa3.94□□□□□ -1.78
CBX1P3-201ENST00000413296 SPEGQ15772 3267 aa3.94□□□□□ -1.78
CBX1P3-201ENST00000413296 NOTCH4Q99466 2003 aa3.94□□□□□ -1.78
CBX1P3-201ENST00000413296 ANKRD17O75179 2603 aaKnown RBP3.93□□□□□ -1.78
CBX1P3-201ENST00000413296 DMXL2Q8TDJ6 3036 aa3.93□□□□□ -1.78
CBX1P3-201ENST00000413296 A0A0D9SG52 128 aa3.93□□□□□ -1.78
CBX1P3-201ENST00000413296 UBA52P62987 128 aaKnown RBP3.93□□□□□ -1.78
CBX1P3-201ENST00000413296 SDIM1Q6ZPB5 146 aa3.93□□□□□ -1.78
CBX1P3-201ENST00000413296 LINC00471Q8N535 108 aa3.93□□□□□ -1.78
CBX1P3-201ENST00000413296 C3orf56Q8N813 242 aa3.93□□□□□ -1.78
CBX1P3-201ENST00000413296 SMCR5Q8TEV8 140 aa3.93□□□□□ -1.78
CBX1P3-201ENST00000413296 LCN9Q8WX39 176 aa3.93□□□□□ -1.78
CBX1P3-201ENST00000413296 SEC11CQ9BY50 192 aa3.93□□□□□ -1.78
CBX1P3-201ENST00000413296 PRO1933Q9H354 126 aa3.93□□□□□ -1.78
CBX1P3-201ENST00000413296 U3KQK5 164 aa3.93□□□□□ -1.78
CBX1P3-201ENST00000413296 CNOT1A5YKK6 2376 aaKnown RBP3.93□□□□□ -1.78
CBX1P3-201ENST00000413296 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.92□□□□□ -1.78
CBX1P3-201ENST00000413296 C19orf71A6NCJ1 209 aa3.92□□□□□ -1.78
CBX1P3-201ENST00000413296 OR51F1A6NGY5 319 aa3.92□□□□□ -1.78
CBX1P3-201ENST00000413296 TCL1BO95988 128 aa3.92□□□□□ -1.78
CBX1P3-201ENST00000413296 PMP2P02689 132 aa3.92□□□□□ -1.78
CBX1P3-201ENST00000413296 TPT1P13693 172 aaKnown RBP3.92□□□□□ -1.78
CBX1P3-201ENST00000413296 FOXA1P55317 472 aa3.92□□□□□ -1.78
CBX1P3-201ENST00000413296 C9orf153Q5TBE3 101 aa3.92□□□□□ -1.78
CBX1P3-201ENST00000413296 PATE2Q6UY27 113 aa3.92□□□□□ -1.78
CBX1P3-201ENST00000413296 SLC35E3Q7Z769 313 aa3.92□□□□□ -1.78
CBX1P3-201ENST00000413296 C10orf111Q8N326 155 aa3.92□□□□□ -1.78
CBX1P3-201ENST00000413296 FAM216BQ8N7L0 139 aa3.92□□□□□ -1.78
CBX1P3-201ENST00000413296 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.92□□□□□ -1.78
CBX1P3-201ENST00000413296 PFN4Q8NHR9 129 aa3.92□□□□□ -1.78
CBX1P3-201ENST00000413296 TYMSOSQ8TAI1 123 aa3.92□□□□□ -1.78
CBX1P3-201ENST00000413296 LINC00574Q9H8X3 128 aa3.92□□□□□ -1.78
CBX1P3-201ENST00000413296 FKBP11Q9NYL4 201 aa3.92□□□□□ -1.78
CBX1P3-201ENST00000413296 EML6Q6ZMW3 1958 aa3.92□□□□□ -1.78
CBX1P3-201ENST00000413296 OBSL1O75147 1896 aa3.92□□□□□ -1.78
CBX1P3-201ENST00000413296 IGHV3-73A0A0B4J1V6 119 aa3.91□□□□□ -1.78
CBX1P3-201ENST00000413296 A0A0B4J2C4 111 aa3.91□□□□□ -1.78
CBX1P3-201ENST00000413296 LOC100996750A0A140TA64 210 aa3.91□□□□□ -1.78
CBX1P3-201ENST00000413296 FAM168BA1KXE4 195 aa3.91□□□□□ -1.78
CBX1P3-201ENST00000413296 APOC4-APOC2K7ER74 178 aa3.91□□□□□ -1.78
CBX1P3-201ENST00000413296 APOC2P02655 101 aa3.91□□□□□ -1.78
CBX1P3-201ENST00000413296 CTSDP07339 412 aaPredicted RBP3.91□□□□□ -1.78
CBX1P3-201ENST00000413296 KLRD1Q13241 179 aa3.91□□□□□ -1.78
CBX1P3-201ENST00000413296 KHDC3LQ587J8 217 aa3.91□□□□□ -1.78
CBX1P3-201ENST00000413296 Q6ZUT4 128 aa3.91□□□□□ -1.78
CBX1P3-201ENST00000413296 LINC00526Q96FQ7 95 aa3.91□□□□□ -1.78
CBX1P3-201ENST00000413296 KRTAP4-6Q9BYQ5 205 aa3.91□□□□□ -1.78
CBX1P3-201ENST00000413296 SMDT1Q9H4I9 107 aa3.91□□□□□ -1.78
CBX1P3-201ENST00000413296 IGSF10Q6WRI0 2623 aa3.91□□□□□ -1.78
CBX1P3-201ENST00000413296 IGF2RP11717 2491 aa3.9□□□□□ -1.78
CBX1P3-201ENST00000413296 SPTAN1Q13813 2472 aaKnown RBP3.9□□□□□ -1.78
CBX1P3-201ENST00000413296 A0A0J9YWU9 116 aa3.9□□□□□ -1.79
CBX1P3-201ENST00000413296 H3BT86 120 aa3.9□□□□□ -1.79
CBX1P3-201ENST00000413296 OR1I1O60431 355 aa3.9□□□□□ -1.79
CBX1P3-201ENST00000413296 RBP4P02753 201 aa3.9□□□□□ -1.79
CBX1P3-201ENST00000413296 CD3DP04234 171 aa3.9□□□□□ -1.79
CBX1P3-201ENST00000413296 MSMBP08118 114 aa3.9□□□□□ -1.79
CBX1P3-201ENST00000413296 CRIP2P52943 208 aaPredicted RBP3.9□□□□□ -1.79
CBX1P3-201ENST00000413296 DYNLT1P63172 113 aa3.9□□□□□ -1.79
CBX1P3-201ENST00000413296 MRPS36P82909 103 aaKnown RBP3.9□□□□□ -1.79
CBX1P3-201ENST00000413296 CDK5R1Q15078 307 aa3.9□□□□□ -1.79
CBX1P3-201ENST00000413296 ZC2HC1BQ5TFG8 222 aa3.9□□□□□ -1.79
CBX1P3-201ENST00000413296 ZNF660Q6AZW8 331 aaPredicted RBP3.9□□□□□ -1.79
CBX1P3-201ENST00000413296 Q6ZS52 159 aa3.9□□□□□ -1.79
CBX1P3-201ENST00000413296 PKMYT1Q99640 499 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms