RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 PYGO2Q9BRQ0 406 aa15.96■□□□□ 0.15
PTCD3-203ENST00000409783 LINC00467Q9BRT7 94 aa15.96■□□□□ 0.15
PTCD3-203ENST00000409783 NKX6-2Q9C056 277 aaPredicted RBP15.96■□□□□ 0.15
PTCD3-203ENST00000409783 ZNF493Q6ZR52 646 aa15.95■□□□□ 0.14
PTCD3-203ENST00000409783 ZNF767PQ75MW2 155 aa15.95■□□□□ 0.14
PTCD3-203ENST00000409783 CYB561D1Q8N8Q1 229 aa15.95■□□□□ 0.14
PTCD3-203ENST00000409783 TMEM263Q8WUH6 116 aaKnown RBP15.95■□□□□ 0.14
PTCD3-203ENST00000409783 C16orf74Q96GX8 76 aa15.95■□□□□ 0.14
PTCD3-203ENST00000409783 ATG101Q9BSB4 218 aa15.95■□□□□ 0.14
PTCD3-203ENST00000409783 ARL2-SNX15V9GYD0 113 aa15.95■□□□□ 0.14
PTCD3-203ENST00000409783 TRAV1-1A0A0B4J248 108 aa15.94■□□□□ 0.14
PTCD3-203ENST00000409783 A0A1B0GV50 99 aa15.94■□□□□ 0.14
PTCD3-203ENST00000409783 NUPR2A6NF83 97 aa15.94■□□□□ 0.14
PTCD3-203ENST00000409783 BOLA1Q9Y3E2 137 aa15.94■□□□□ 0.14
PTCD3-203ENST00000409783 CCL20P78556 96 aa15.93■□□□□ 0.14
PTCD3-203ENST00000409783 Q6AWC8 147 aa15.93■□□□□ 0.14
PTCD3-203ENST00000409783 TMEM75Q8N9X5 138 aa15.93■□□□□ 0.14
PTCD3-203ENST00000409783 LINC00479Q96M42 142 aa15.93■□□□□ 0.14
PTCD3-203ENST00000409783 PSG8Q9UQ74 426 aa15.93■□□□□ 0.14
PTCD3-203ENST00000409783 TEX48A0A1B0GUV7 120 aa15.92■□□□□ 0.14
PTCD3-203ENST00000409783 PEX7O00628 323 aa15.92■□□□□ 0.14
PTCD3-203ENST00000409783 PAGE4O60829 102 aa15.92■□□□□ 0.14
PTCD3-203ENST00000409783 IFNA7P01567 189 aa15.92■□□□□ 0.14
PTCD3-203ENST00000409783 ATP5G3P48201 142 aa15.92■□□□□ 0.14
PTCD3-203ENST00000409783 FLI1Q01543 452 aaPredicted RBP15.92■□□□□ 0.14
PTCD3-203ENST00000409783 LYRM9A8MSI8 78 aa15.91■□□□□ 0.14
PTCD3-203ENST00000409783 K7EQM0 130 aa15.91■□□□□ 0.14
PTCD3-203ENST00000409783 ANXA2RQ3ZCQ2 193 aa15.91■□□□□ 0.14
PTCD3-203ENST00000409783 HIST1H2BAQ96A08 127 aa15.91■□□□□ 0.14
PTCD3-203ENST00000409783 TREM1Q9NP99 234 aa15.91■□□□□ 0.14
PTCD3-203ENST00000409783 TRAV34A0A0B4J273 112 aa15.9■□□□□ 0.14
PTCD3-203ENST00000409783 C11orf94C9JXX5 98 aa15.9■□□□□ 0.14
PTCD3-203ENST00000409783 CST9LP1Q5W188 147 aa15.9■□□□□ 0.14
PTCD3-203ENST00000409783 EIF4E3Q8N5X7 224 aaKnown RBP15.9■□□□□ 0.14
PTCD3-203ENST00000409783 C11orf72Q8NBR9 251 aa15.9■□□□□ 0.14
PTCD3-203ENST00000409783 IGHV1OR15-1A0A075B7D0 117 aa15.89■□□□□ 0.13
PTCD3-203ENST00000409783 TRAV10A0A0B4J240 114 aa15.89■□□□□ 0.13
PTCD3-203ENST00000409783 FBLL1A6NHQ2 334 aaKnown RBP15.89■□□□□ 0.13
PTCD3-203ENST00000409783 F6UZH7 168 aa15.89■□□□□ 0.13
PTCD3-203ENST00000409783 C8orf49Q96NF6 230 aa15.89■□□□□ 0.13
PTCD3-203ENST00000409783 LYSTQ99698 3801 aa15.89■□□□□ 0.13
PTCD3-203ENST00000409783 TCEAL7Q9BRU2 100 aa15.89■□□□□ 0.13
PTCD3-203ENST00000409783 TP53TG3Q9ULZ0 132 aa15.89■□□□□ 0.13
PTCD3-203ENST00000409783 TIMM8BQ9Y5J9 83 aaPredicted RBP15.89■□□□□ 0.13
PTCD3-203ENST00000409783 PPT1P50897 306 aa15.88■□□□□ 0.13
PTCD3-203ENST00000409783 ALKAL2Q6UX46 152 aa15.88■□□□□ 0.13
PTCD3-203ENST00000409783 PRNTQ86SH4 94 aa15.88■□□□□ 0.13
PTCD3-203ENST00000409783 KLK5Q9Y337 293 aaPredicted RBP15.88■□□□□ 0.13
PTCD3-203ENST00000409783 SACSQ9NZJ4 4579 aa15.88■□□□□ 0.13
PTCD3-203ENST00000409783 RGS13O14921 159 aa15.87■□□□□ 0.13
PTCD3-203ENST00000409783 ZNF80P51504 273 aaPredicted RBP15.87■□□□□ 0.13
PTCD3-203ENST00000409783 NDFIP1Q9BT67 221 aa15.87■□□□□ 0.13
PTCD3-203ENST00000409783 NOP10Q9NPE3 64 aaKnown RBP15.87■□□□□ 0.13
PTCD3-203ENST00000409783 KLF12Q9Y4X4 402 aa15.87■□□□□ 0.13
PTCD3-203ENST00000409783 CBY3A6NI87 242 aa15.86■□□□□ 0.13
PTCD3-203ENST00000409783 DAD1P61803 113 aa15.86■□□□□ 0.13
PTCD3-203ENST00000409783 MUC21Q5SSG8 566 aa15.86■□□□□ 0.13
PTCD3-203ENST00000409783 LINC00612Q8N6U2 182 aa15.86■□□□□ 0.13
PTCD3-203ENST00000409783 ZNF680Q8NEM1 530 aa15.86■□□□□ 0.13
PTCD3-203ENST00000409783 GSN-AS1Q9NRJ2 163 aa15.86■□□□□ 0.13
PTCD3-203ENST00000409783 DEFB131BA0A096LNP1 70 aa15.85■□□□□ 0.13
PTCD3-203ENST00000409783 DAZ2Q13117 558 aaKnown RBP15.85■□□□□ 0.13
PTCD3-203ENST00000409783 Q86TA4 180 aa15.85■□□□□ 0.13
PTCD3-203ENST00000409783 C2CD4CQ8TF44 421 aa15.85■□□□□ 0.13
PTCD3-203ENST00000409783 DNAH1Q9P2D7 4330 aa15.85■□□□□ 0.13
PTCD3-203ENST00000409783 ALMS1Q8TCU4 4167 aa15.84■□□□□ 0.13
PTCD3-203ENST00000409783 TRAV21A0A0B4J279 112 aa15.84■□□□□ 0.13
PTCD3-203ENST00000409783 DEFB130BP0DP73 79 aa15.84■□□□□ 0.13
PTCD3-203ENST00000409783 DEFB130AP0DP74 79 aa15.84■□□□□ 0.13
PTCD3-203ENST00000409783 TDRG1Q3Y452 100 aa15.84■□□□□ 0.13
PTCD3-203ENST00000409783 SAPCD1Q5SSQ6 148 aa15.84■□□□□ 0.13
PTCD3-203ENST00000409783 IBA57Q5T440 356 aaKnown RBP15.84■□□□□ 0.13
PTCD3-203ENST00000409783 MANBALQ9NQG1 85 aa15.84■□□□□ 0.13
PTCD3-203ENST00000409783 GNG13Q9P2W3 67 aa15.84■□□□□ 0.13
PTCD3-203ENST00000409783 TRBV6-1A0A0K0K1D8 114 aa15.83■□□□□ 0.12
PTCD3-203ENST00000409783 SNURFLB1AK76 121 aa15.83■□□□□ 0.12
PTCD3-203ENST00000409783 TEX46H3BTG2 121 aa15.83■□□□□ 0.12
PTCD3-203ENST00000409783 GCGP01275 180 aa15.83■□□□□ 0.12
PTCD3-203ENST00000409783 TCL1AP56279 114 aa15.83■□□□□ 0.12
PTCD3-203ENST00000409783 FMC1Q96HJ9 113 aa15.83■□□□□ 0.12
PTCD3-203ENST00000409783 C11orf21Q9P2W6 132 aa15.83■□□□□ 0.12
PTCD3-203ENST00000409783 SCO2A0A1W2PP80 73 aa15.82■□□□□ 0.12
PTCD3-203ENST00000409783 TMEM183BQ1AE95 376 aa15.82■□□□□ 0.12
PTCD3-203ENST00000409783 SMUG1Q53HV7 270 aa15.82■□□□□ 0.12
PTCD3-203ENST00000409783 COX8CQ7Z4L0 72 aa15.82■□□□□ 0.12
PTCD3-203ENST00000409783 LCE6AA0A183 80 aa15.81■□□□□ 0.12
PTCD3-203ENST00000409783 FAM159AQ6UWV7 190 aa15.81■□□□□ 0.12
PTCD3-203ENST00000409783 APLNQ9ULZ1 77 aa15.81■□□□□ 0.12
PTCD3-203ENST00000409783 IGLL5B9A064 214 aa15.8■□□□□ 0.12
PTCD3-203ENST00000409783 LTAP01374 205 aa15.8■□□□□ 0.12
PTCD3-203ENST00000409783 PFN1P07737 140 aaKnown RBP15.8■□□□□ 0.12
PTCD3-203ENST00000409783 AKR1C3P42330 323 aa15.8■□□□□ 0.12
PTCD3-203ENST00000409783 Q6ZTI0 123 aa15.8■□□□□ 0.12
PTCD3-203ENST00000409783 MDFICQ9P1T7 246 aa15.8■□□□□ 0.12
PTCD3-203ENST00000409783 NAGKQ9UJ70 344 aa15.8■□□□□ 0.12
PTCD3-203ENST00000409783 ZFP30Q9Y2G7 519 aa15.8■□□□□ 0.12
PTCD3-203ENST00000409783 GNRH2O43555 120 aa15.79■□□□□ 0.12
PTCD3-203ENST00000409783 SPINK4O60575 86 aa15.79■□□□□ 0.12
PTCD3-203ENST00000409783 UBE2G1P62253 170 aa15.79■□□□□ 0.12
PTCD3-203ENST00000409783 TMEM183AQ8IXX5 376 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms