RNA–Protein interactions for RNA: ENST00000409478.5

R3HDM1-202, Transcript of R3H domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene R3HDM1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-202ENST00000409478 SPRY3O43610 288 aa4.54□□□□□ -1.68
R3HDM1-202ENST00000409478 MRGPRG-AS1Q2M3A8 158 aa4.54□□□□□ -1.68
R3HDM1-202ENST00000409478 SPRNQ5BIV9 151 aa4.54□□□□□ -1.68
R3HDM1-202ENST00000409478 PMS2CLQ68D20 193 aa4.54□□□□□ -1.68
R3HDM1-202ENST00000409478 FAM216BQ8N7L0 139 aa4.54□□□□□ -1.68
R3HDM1-202ENST00000409478 RNF125Q96EQ8 232 aa4.54□□□□□ -1.68
R3HDM1-202ENST00000409478 DEFB127Q9H1M4 99 aa4.54□□□□□ -1.68
R3HDM1-202ENST00000409478 SPRR3Q9UBC9 169 aa4.54□□□□□ -1.68
R3HDM1-202ENST00000409478 VPREB3Q9UKI3 123 aa4.54□□□□□ -1.68
R3HDM1-202ENST00000409478 ROS1P08922 2347 aa4.54□□□□□ -1.68
R3HDM1-202ENST00000409478 I3L2K1 104 aa4.54□□□□□ -1.68
R3HDM1-202ENST00000409478 FAM201AQ5SY85 155 aa4.54□□□□□ -1.68
R3HDM1-202ENST00000409478 NEXN-AS1Q8NBZ9 246 aa4.54□□□□□ -1.68
R3HDM1-202ENST00000409478 ONECUT1Q9UBC0 465 aa4.54□□□□□ -1.68
R3HDM1-202ENST00000409478 PCNX1Q96RV3 2341 aa4.54□□□□□ -1.68
R3HDM1-202ENST00000409478 IGKV1-17P01599 117 aa4.54□□□□□ -1.68
R3HDM1-202ENST00000409478 GATA1P15976 413 aaPredicted RBP4.54□□□□□ -1.68
R3HDM1-202ENST00000409478 RPL13AP40429 203 aaKnown RBP4.54□□□□□ -1.68
R3HDM1-202ENST00000409478 DEFB124Q8NES8 71 aa4.54□□□□□ -1.68
R3HDM1-202ENST00000409478 LINC01600Q96MT4 127 aa4.54□□□□□ -1.68
R3HDM1-202ENST00000409478 SCGB3A1Q96QR1 104 aa4.54□□□□□ -1.68
R3HDM1-202ENST00000409478 SPANXDQ9BXN6 97 aa4.54□□□□□ -1.68
R3HDM1-202ENST00000409478 PRO1854Q9UHT4 67 aa4.54□□□□□ -1.68
R3HDM1-202ENST00000409478 TNCP24821 2201 aa4.53□□□□□ -1.68
R3HDM1-202ENST00000409478 IGKV2-40A0A087WW87 121 aaPredicted RBP4.53□□□□□ -1.68
R3HDM1-202ENST00000409478 CRLF1O75462 422 aa4.53□□□□□ -1.68
R3HDM1-202ENST00000409478 IGKV2D-40P01614 121 aaPredicted RBP4.53□□□□□ -1.68
R3HDM1-202ENST00000409478 COX6B1P14854 86 aa4.53□□□□□ -1.68
R3HDM1-202ENST00000409478 HERVK_113P61574 105 aa4.53□□□□□ -1.68
R3HDM1-202ENST00000409478 ZNF491Q8N8L2 437 aa4.53□□□□□ -1.68
R3HDM1-202ENST00000409478 NRACQ8N912 160 aa4.53□□□□□ -1.68
R3HDM1-202ENST00000409478 TOMM6Q96B49 74 aa4.53□□□□□ -1.68
R3HDM1-202ENST00000409478 RAB1BQ9H0U4 201 aa4.53□□□□□ -1.68
R3HDM1-202ENST00000409478 IGF2RP11717 2491 aa4.53□□□□□ -1.68
R3HDM1-202ENST00000409478 CEP295Q9C0D2 2601 aa4.53□□□□□ -1.68
R3HDM1-202ENST00000409478 NOTCH2Q04721 2471 aa4.53□□□□□ -1.68
R3HDM1-202ENST00000409478 C9JAW5 83 aa4.53□□□□□ -1.68
R3HDM1-202ENST00000409478 ENSAO43768 121 aaKnown RBP4.53□□□□□ -1.68
R3HDM1-202ENST00000409478 EFNA4P52798 201 aa4.53□□□□□ -1.68
R3HDM1-202ENST00000409478 PAPPA-AS1Q5QFB9 102 aa4.53□□□□□ -1.68
R3HDM1-202ENST00000409478 TEX36Q5VZQ5 186 aa4.53□□□□□ -1.68
R3HDM1-202ENST00000409478 CNEP1R1Q8N9A8 125 aa4.53□□□□□ -1.68
R3HDM1-202ENST00000409478 DEFB108BQ8NET1 73 aa4.53□□□□□ -1.68
R3HDM1-202ENST00000409478 RASL10AQ92737 203 aa4.53□□□□□ -1.68
R3HDM1-202ENST00000409478 VKORC1Q9BQB6 163 aa4.53□□□□□ -1.68
R3HDM1-202ENST00000409478 PCNX2A6NKB5 2137 aa4.53□□□□□ -1.68
R3HDM1-202ENST00000409478 CFC1BP0CG36 223 aa4.53□□□□□ -1.68
R3HDM1-202ENST00000409478 CFC1P0CG37 223 aa4.53□□□□□ -1.68
R3HDM1-202ENST00000409478 ZNF80P51504 273 aaPredicted RBP4.53□□□□□ -1.68
R3HDM1-202ENST00000409478 LY6DQ14210 128 aa4.53□□□□□ -1.68
R3HDM1-202ENST00000409478 ZNF672Q499Z4 452 aaPredicted RBP4.53□□□□□ -1.68
R3HDM1-202ENST00000409478 TMEM105Q8N8V8 129 aa4.53□□□□□ -1.68
R3HDM1-202ENST00000409478 C15orf53Q8NAA6 179 aa4.53□□□□□ -1.68
R3HDM1-202ENST00000409478 SPRY4Q9C004 299 aa4.53□□□□□ -1.68
R3HDM1-202ENST00000409478 TEX22C9J3V5 150 aa4.52□□□□□ -1.69
R3HDM1-202ENST00000409478 CRYGBP07316 175 aa4.52□□□□□ -1.69
R3HDM1-202ENST00000409478 P0DMU3 169 aa4.52□□□□□ -1.69
R3HDM1-202ENST00000409478 FAM231AP0DMU4 169 aa4.52□□□□□ -1.69
R3HDM1-202ENST00000409478 FAM231CP0DMU5 169 aa4.52□□□□□ -1.69
R3HDM1-202ENST00000409478 RPL7P18124 248 aaKnown RBP4.52□□□□□ -1.69
R3HDM1-202ENST00000409478 TNFAIP6P98066 277 aaPredicted RBP4.52□□□□□ -1.69
R3HDM1-202ENST00000409478 ATXN8Q156A1 80 aa4.52□□□□□ -1.69
R3HDM1-202ENST00000409478 Q8N1Y9 231 aa4.52□□□□□ -1.69
R3HDM1-202ENST00000409478 MDS2Q8NDY4 140 aa4.52□□□□□ -1.69
R3HDM1-202ENST00000409478 PLEKHB2Q96CS7 222 aa4.52□□□□□ -1.69
R3HDM1-202ENST00000409478 OTOGLQ3ZCN5 2332 aa4.52□□□□□ -1.69
R3HDM1-202ENST00000409478 SCGB2A1O75556 95 aa4.52□□□□□ -1.69
R3HDM1-202ENST00000409478 APELAP0DMC3 54 aa4.52□□□□□ -1.69
R3HDM1-202ENST00000409478 GLRXP35754 106 aa4.52□□□□□ -1.69
R3HDM1-202ENST00000409478 FOXC1Q12948 553 aa4.52□□□□□ -1.69
R3HDM1-202ENST00000409478 ZNF575Q86XF7 245 aa4.52□□□□□ -1.69
R3HDM1-202ENST00000409478 SIGLEC9Q9Y336 463 aa4.52□□□□□ -1.69
R3HDM1-202ENST00000409478 ACACBO00763 2458 aa4.52□□□□□ -1.69
R3HDM1-202ENST00000409478 TRAV2A0A0B4J234 112 aa4.52□□□□□ -1.69
R3HDM1-202ENST00000409478 A0A0J9YY99 117 aa4.52□□□□□ -1.69
R3HDM1-202ENST00000409478 IGHV3-30P01768 117 aa4.52□□□□□ -1.69
R3HDM1-202ENST00000409478 IGHV3-30-5P0DP03 117 aa4.52□□□□□ -1.69
R3HDM1-202ENST00000409478 NRGNQ92686 78 aa4.52□□□□□ -1.69
R3HDM1-202ENST00000409478 TIMD4Q96H15 378 aa4.52□□□□□ -1.69
R3HDM1-202ENST00000409478 ODF3Q96PU9 254 aa4.52□□□□□ -1.69
R3HDM1-202ENST00000409478 SMIM2Q9BVW6 85 aa4.52□□□□□ -1.69
R3HDM1-202ENST00000409478 CHD8Q9HCK8 2581 aa4.52□□□□□ -1.69
R3HDM1-202ENST00000409478 DSCAML1Q8TD84 2053 aa4.52□□□□□ -1.69
R3HDM1-202ENST00000409478 AGRNO00468 2067 aa4.52□□□□□ -1.69
R3HDM1-202ENST00000409478 IGLV3-9A0A075B6K5 115 aa4.52□□□□□ -1.69
R3HDM1-202ENST00000409478 MSMPQ1L6U9 139 aa4.52□□□□□ -1.69
R3HDM1-202ENST00000409478 C5orf47Q569G3 176 aa4.52□□□□□ -1.69
R3HDM1-202ENST00000409478 FAM57AQ8TBR7 257 aa4.52□□□□□ -1.69
R3HDM1-202ENST00000409478 NTN5Q8WTR8 489 aaPredicted RBP4.52□□□□□ -1.69
R3HDM1-202ENST00000409478 PSMG3-AS1Q96PY0 264 aa4.52□□□□□ -1.69
R3HDM1-202ENST00000409478 SLC50A1Q9BRV3 221 aa4.52□□□□□ -1.69
R3HDM1-202ENST00000409478 TGFAP01135 160 aa4.51□□□□□ -1.69
R3HDM1-202ENST00000409478 PRB4P10163 310 aaPredicted RBP4.51□□□□□ -1.69
R3HDM1-202ENST00000409478 CCL3L1P16619 93 aa4.51□□□□□ -1.69
R3HDM1-202ENST00000409478 ID1P41134 155 aa4.51□□□□□ -1.69
R3HDM1-202ENST00000409478 ERCC8Q13216 396 aa4.51□□□□□ -1.69
R3HDM1-202ENST00000409478 Q8TAT8 98 aa4.51□□□□□ -1.69
R3HDM1-202ENST00000409478 BAALCQ8WXS3 180 aa4.51□□□□□ -1.69
R3HDM1-202ENST00000409478 SPXQ9BT56 116 aa4.51□□□□□ -1.69
R3HDM1-202ENST00000409478 SPANXCQ9NY87 97 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms