RNA–Protein interactions for RNA: ENST00000403994.7

TPM1-207, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TPM1, Length 1,049 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-207ENST00000403994 RBAKDNA6NC62 111 aa10.64□□□□□ -0.71
TPM1-207ENST00000403994 EIF3GO75821 320 aaKnown RBP eCLIP10.64□□□□□ -0.71
TPM1-207ENST00000403994 CSN1S1P47710 185 aa10.64□□□□□ -0.71
TPM1-207ENST00000403994 TAS2R45P59539 299 aa10.64□□□□□ -0.71
TPM1-207ENST00000403994 TNP2Q05952 138 aa10.64□□□□□ -0.71
TPM1-207ENST00000403994 SCGB1C1Q8TD33 95 aa10.64□□□□□ -0.71
TPM1-207ENST00000403994 VSIG2Q96IQ7 327 aa10.64□□□□□ -0.71
TPM1-207ENST00000403994 UPK3BQ9BT76 320 aa10.64□□□□□ -0.71
TPM1-207ENST00000403994 WFDC1Q9HC57 220 aa10.64□□□□□ -0.71
TPM1-207ENST00000403994 ARPC5LQ9BPX5 153 aa10.63□□□□□ -0.71
TPM1-207ENST00000403994 MRPL16Q9NX20 251 aaKnown RBP10.63□□□□□ -0.71
TPM1-207ENST00000403994 MRPS16Q9Y3D3 137 aaKnown RBP10.63□□□□□ -0.71
TPM1-207ENST00000403994 ABCA13Q86UQ4 5058 aa10.63□□□□□ -0.71
TPM1-207ENST00000403994 A0A096LPF7 62 aa10.62□□□□□ -0.71
TPM1-207ENST00000403994 DIRC3C9JPN6 131 aa10.62□□□□□ -0.71
TPM1-207ENST00000403994 ZNF415Q09FC8 603 aa10.62□□□□□ -0.71
TPM1-207ENST00000403994 ZNF266Q14584 549 aa10.62□□□□□ -0.71
TPM1-207ENST00000403994 ESRGQ1W209 222 aa10.62□□□□□ -0.71
TPM1-207ENST00000403994 TTC32Q5I0X7 151 aa10.62□□□□□ -0.71
TPM1-207ENST00000403994 ST6GAL2Q96JF0 529 aa10.62□□□□□ -0.71
TPM1-207ENST00000403994 Q9H8V8 135 aa10.62□□□□□ -0.71
TPM1-207ENST00000403994 ALG5Q9Y673 324 aa10.62□□□□□ -0.71
TPM1-207ENST00000403994 RAB2AP61019 212 aa10.61□□□□□ -0.71
TPM1-207ENST00000403994 MUC21Q5SSG8 566 aa10.61□□□□□ -0.71
TPM1-207ENST00000403994 OTORQ9NRC9 128 aa10.61□□□□□ -0.71
TPM1-207ENST00000403994 IGHV3-53P01767 116 aa10.6□□□□□ -0.71
TPM1-207ENST00000403994 ACOT6Q3I5F7 207 aaPredicted RBP10.6□□□□□ -0.71
TPM1-207ENST00000403994 Q6AWC8 147 aa10.6□□□□□ -0.71
TPM1-207ENST00000403994 HYLS1Q96M11 299 aa10.6□□□□□ -0.71
TPM1-207ENST00000403994 BATF3Q9NR55 127 aa10.6□□□□□ -0.71
TPM1-207ENST00000403994 RPH3ALQ9UNE2 315 aa10.6□□□□□ -0.71
TPM1-207ENST00000403994 LENEPQ9Y5L5 61 aa10.6□□□□□ -0.71
TPM1-207ENST00000403994 PQLC2Q6ZP29 291 aa10.59□□□□□ -0.71
TPM1-207ENST00000403994 TMED6Q8WW62 240 aa10.59□□□□□ -0.71
TPM1-207ENST00000403994 A0A1W2PPQ1 181 aa10.58□□□□□ -0.72
TPM1-207ENST00000403994 PTTG1O95997 202 aa10.58□□□□□ -0.72
TPM1-207ENST00000403994 TMEM183BQ1AE95 376 aa10.58□□□□□ -0.72
TPM1-207ENST00000403994 TMEM183AQ8IXX5 376 aa10.58□□□□□ -0.72
TPM1-207ENST00000403994 MDFICQ9P1T7 246 aa10.58□□□□□ -0.72
TPM1-207ENST00000403994 ICOSQ9Y6W8 199 aa10.58□□□□□ -0.72
TPM1-207ENST00000403994 APOBP04114 4563 aaKnown RBP10.58□□□□□ -0.72
TPM1-207ENST00000403994 DNAH5Q8TE73 4624 aa10.57□□□□□ -0.72
TPM1-207ENST00000403994 A0A1W2PPV4 95 aa10.57□□□□□ -0.72
TPM1-207ENST00000403994 PGPA6NDG6 321 aa10.57□□□□□ -0.72
TPM1-207ENST00000403994 C16orf90A8MZG2 172 aa10.57□□□□□ -0.72
TPM1-207ENST00000403994 HMGB3O15347 200 aaKnown RBP10.57□□□□□ -0.72
TPM1-207ENST00000403994 PAX4O43316 350 aa10.57□□□□□ -0.72
TPM1-207ENST00000403994 ARL14EPLP0DKL9 152 aa10.57□□□□□ -0.72
TPM1-207ENST00000403994 FAM74A1Q5RGS3 127 aa10.57□□□□□ -0.72
TPM1-207ENST00000403994 GOLT1AQ6ZVE7 132 aa10.57□□□□□ -0.72
TPM1-207ENST00000403994 OR10G4Q8NGN3 311 aa10.57□□□□□ -0.72
TPM1-207ENST00000403994 OR10G9Q8NGN4 311 aa10.57□□□□□ -0.72
TPM1-207ENST00000403994 OR10G7Q8NGN6 311 aa10.57□□□□□ -0.72
TPM1-207ENST00000403994 OR2G3Q8NGZ4 309 aa10.57□□□□□ -0.72
TPM1-207ENST00000403994 CMTM2Q8TAZ6 248 aa10.57□□□□□ -0.72
TPM1-207ENST00000403994 PRO0255Q9UI72 69 aa10.57□□□□□ -0.72
TPM1-207ENST00000403994 TRGV11A0A075B6L2 103 aa10.56□□□□□ -0.72
TPM1-207ENST00000403994 TRAV8-1A0A0A6YYK1 113 aa10.56□□□□□ -0.72
TPM1-207ENST00000403994 CDC34P49427 236 aaPredicted RBP10.56□□□□□ -0.72
TPM1-207ENST00000403994 GNG5P63218 68 aa10.56□□□□□ -0.72
TPM1-207ENST00000403994 HSD17B11Q8NBQ5 300 aa10.56□□□□□ -0.72
TPM1-207ENST00000403994 C8orf49Q96NF6 230 aa10.56□□□□□ -0.72
TPM1-207ENST00000403994 AQP10Q96PS8 301 aa10.56□□□□□ -0.72
TPM1-207ENST00000403994 NAGKQ9UJ70 344 aa10.56□□□□□ -0.72
TPM1-207ENST00000403994 F6UZH7 168 aa10.55□□□□□ -0.72
TPM1-207ENST00000403994 CRYBA4P53673 196 aa10.55□□□□□ -0.72
TPM1-207ENST00000403994 FHL2Q14192 279 aa10.55□□□□□ -0.72
TPM1-207ENST00000403994 TDRG1Q3Y452 100 aa10.55□□□□□ -0.72
TPM1-207ENST00000403994 FAM159AQ6UWV7 190 aa10.55□□□□□ -0.72
TPM1-207ENST00000403994 ARL6IP6Q8N6S5 226 aa10.55□□□□□ -0.72
TPM1-207ENST00000403994 NXPH4O95158 308 aa10.54□□□□□ -0.72
TPM1-207ENST00000403994 SFTA3P0C7M3 94 aa10.54□□□□□ -0.72
TPM1-207ENST00000403994 SLAQ13239 276 aa10.54□□□□□ -0.72
TPM1-207ENST00000403994 RASL10AQ92737 203 aa10.54□□□□□ -0.72
TPM1-207ENST00000403994 TVP23CQ96ET8 276 aa10.54□□□□□ -0.72
TPM1-207ENST00000403994 ZNF479Q96JC4 524 aa10.54□□□□□ -0.72
TPM1-207ENST00000403994 SPXQ9BT56 116 aa10.54□□□□□ -0.72
TPM1-207ENST00000403994 PSMG3Q9BT73 122 aaPredicted RBP10.54□□□□□ -0.72
TPM1-207ENST00000403994 MED28Q9H204 178 aa10.54□□□□□ -0.72
TPM1-207ENST00000403994 HHLA3Q9XRX5 114 aa10.54□□□□□ -0.72
TPM1-207ENST00000403994 SIVA1O15304 175 aa10.53□□□□□ -0.72
TPM1-207ENST00000403994 STAG3L2P0CL84 134 aa10.53□□□□□ -0.72
TPM1-207ENST00000403994 STAG3L3P0CL85 134 aa10.53□□□□□ -0.72
TPM1-207ENST00000403994 BTF3P20290 206 aaKnown RBP10.53□□□□□ -0.72
TPM1-207ENST00000403994 ATP6V0CP27449 155 aa10.53□□□□□ -0.72
TPM1-207ENST00000403994 LINC00315P59091 139 aa10.53□□□□□ -0.72
TPM1-207ENST00000403994 SH3BGRL3Q9H299 93 aa10.53□□□□□ -0.72
TPM1-207ENST00000403994 TRAV21A0A0B4J279 112 aa10.52□□□□□ -0.73
TPM1-207ENST00000403994 TRGV4A0A0C4DH28 118 aa10.52□□□□□ -0.73
TPM1-207ENST00000403994 IGHV3-16A0A0C4DH30 117 aa10.52□□□□□ -0.73
TPM1-207ENST00000403994 GCHFRP30047 84 aa10.52□□□□□ -0.73
TPM1-207ENST00000403994 Q5BKY6 102 aa10.52□□□□□ -0.73
TPM1-207ENST00000403994 SPATA12Q7Z6I5 190 aa10.52□□□□□ -0.73
TPM1-207ENST00000403994 C5orf17Q8NAS9 161 aa10.52□□□□□ -0.73
TPM1-207ENST00000403994 RAB24Q969Q5 203 aa10.52□□□□□ -0.73
TPM1-207ENST00000403994 TREM1Q9NP99 234 aa10.52□□□□□ -0.73
TPM1-207ENST00000403994 TRAV4A0A0B4J268 109 aa10.51□□□□□ -0.73
TPM1-207ENST00000403994 K7EQD1 137 aa10.51□□□□□ -0.73
TPM1-207ENST00000403994 TYMSP04818 313 aa10.51□□□□□ -0.73
TPM1-207ENST00000403994 GIPP09681 153 aaPredicted RBP10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 593.9 ms