RNA–Protein interactions for RNA: ENST00000399976.6

USP16-204, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP16, Length 2,963 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-204ENST00000399976 BLNKQ8WV28 456 aa5.46□□□□□ -1.54
USP16-204ENST00000399976 SMCO4Q9NRQ5 59 aa5.46□□□□□ -1.54
USP16-204ENST00000399976 IGKV3-7A0A075B6H7 116 aa5.45□□□□□ -1.54
USP16-204ENST00000399976 LYRM9A8MSI8 78 aa5.45□□□□□ -1.54
USP16-204ENST00000399976 C3orf84H3BNL1 204 aa5.45□□□□□ -1.54
USP16-204ENST00000399976 GATCO43716 136 aaKnown RBP5.45□□□□□ -1.54
USP16-204ENST00000399976 CIDEAO60543 219 aa5.45□□□□□ -1.54
USP16-204ENST00000399976 ZNF324O75467 553 aaPredicted RBP5.45□□□□□ -1.54
USP16-204ENST00000399976 BTF3P20290 206 aaKnown RBP5.45□□□□□ -1.54
USP16-204ENST00000399976 RANP62826 216 aaKnown RBP5.45□□□□□ -1.54
USP16-204ENST00000399976 ZNF506Q5JVG8 444 aa5.45□□□□□ -1.54
USP16-204ENST00000399976 C1orf158Q8N1D5 194 aa5.45□□□□□ -1.54
USP16-204ENST00000399976 C2CD4CQ8TF44 421 aa5.45□□□□□ -1.54
USP16-204ENST00000399976 VAX2Q9UIW0 290 aa5.45□□□□□ -1.54
USP16-204ENST00000399976 YTHDF2Q9Y5A9 579 aaKnown RBP5.45□□□□□ -1.54
USP16-204ENST00000399976 DNAH9Q9NYC9 4486 aa5.45□□□□□ -1.54
USP16-204ENST00000399976 PRAC2D3DTV9 90 aa5.45□□□□□ -1.54
USP16-204ENST00000399976 LTAP01374 205 aa5.45□□□□□ -1.54
USP16-204ENST00000399976 MT-ND4LP03901 98 aa5.45□□□□□ -1.54
USP16-204ENST00000399976 BCL2P10415 239 aa5.45□□□□□ -1.54
USP16-204ENST00000399976 RAB5BP61020 215 aa5.45□□□□□ -1.54
USP16-204ENST00000399976 TMEM263Q8WUH6 116 aaKnown RBP5.45□□□□□ -1.54
USP16-204ENST00000399976 ASCL2Q99929 193 aa5.45□□□□□ -1.54
USP16-204ENST00000399976 LOC102723971A0A1B0GUV8 181 aa5.44□□□□□ -1.54
USP16-204ENST00000399976 C9JCJ5 164 aa5.44□□□□□ -1.54
USP16-204ENST00000399976 PRB2P02812 416 aaPredicted RBP5.44□□□□□ -1.54
USP16-204ENST00000399976 MED14OSP0DP75 135 aa5.44□□□□□ -1.54
USP16-204ENST00000399976 HLA-DMBP28068 263 aa5.44□□□□□ -1.54
USP16-204ENST00000399976 DAZ2Q13117 558 aaKnown RBP5.44□□□□□ -1.54
USP16-204ENST00000399976 PEA15Q15121 130 aa5.44□□□□□ -1.54
USP16-204ENST00000399976 ZNF124Q15973 351 aa5.44□□□□□ -1.54
USP16-204ENST00000399976 PCP4L1A6NKN8 68 aa5.44□□□□□ -1.54
USP16-204ENST00000399976 C11orf94C9JXX5 98 aa5.44□□□□□ -1.54
USP16-204ENST00000399976 M0R3E3 92 aa5.44□□□□□ -1.54
USP16-204ENST00000399976 S100PP25815 95 aa5.44□□□□□ -1.54
USP16-204ENST00000399976 MEF2BQ02080 365 aaPredicted RBP5.44□□□□□ -1.54
USP16-204ENST00000399976 Q86TA4 180 aa5.44□□□□□ -1.54
USP16-204ENST00000399976 KCNS1Q96KK3 526 aa5.44□□□□□ -1.54
USP16-204ENST00000399976 RARRES2Q99969 163 aa5.44□□□□□ -1.54
USP16-204ENST00000399976 EIF3GO75821 320 aaKnown RBP eCLIP5.43□□□□□ -1.54
USP16-204ENST00000399976 RPL35AP18077 110 aaKnown RBP5.43□□□□□ -1.54
USP16-204ENST00000399976 LGALS9BQ3B8N2 356 aa5.43□□□□□ -1.54
USP16-204ENST00000399976 GFI1BQ5VTD9 330 aa5.43□□□□□ -1.54
USP16-204ENST00000399976 NIPSNAP3BQ9BS92 247 aa5.43□□□□□ -1.54
USP16-204ENST00000399976 TMPRSS5Q9H3S3 457 aa5.43□□□□□ -1.54
USP16-204ENST00000399976 PSG8Q9UQ74 426 aa5.43□□□□□ -1.54
USP16-204ENST00000399976 TRAV21A0A0B4J279 112 aa5.43□□□□□ -1.54
USP16-204ENST00000399976 F6UB75 175 aa5.43□□□□□ -1.54
USP16-204ENST00000399976 SUMO1P63165 101 aaKnown RBP5.43□□□□□ -1.54
USP16-204ENST00000399976 CBLN2Q8IUK8 224 aa5.43□□□□□ -1.54
USP16-204ENST00000399976 TMEM183AQ8IXX5 376 aa5.43□□□□□ -1.54
USP16-204ENST00000399976 OR4B1Q8NGF8 309 aa5.43□□□□□ -1.54
USP16-204ENST00000399976 OR11H2Q8NH07 326 aa5.43□□□□□ -1.54
USP16-204ENST00000399976 RNASE8Q8TDE3 154 aaKnown RBP5.43□□□□□ -1.54
USP16-204ENST00000399976 SPXQ9BT56 116 aa5.43□□□□□ -1.54
USP16-204ENST00000399976 MLST8Q9BVC4 326 aa5.43□□□□□ -1.54
USP16-204ENST00000399976 SLC35B3Q9H1N7 401 aa5.43□□□□□ -1.54
USP16-204ENST00000399976 TRGV11A0A075B6L2 103 aa5.43□□□□□ -1.54
USP16-204ENST00000399976 RHEBQ15382 184 aa5.43□□□□□ -1.54
USP16-204ENST00000399976 DEFB135Q30KP9 77 aa5.43□□□□□ -1.54
USP16-204ENST00000399976 YPEL4Q96NS1 127 aa5.43□□□□□ -1.54
USP16-204ENST00000399976 VGLL1Q99990 258 aa5.43□□□□□ -1.54
USP16-204ENST00000399976 PRKDCP78527 4128 aaKnown RBP5.42□□□□□ -1.54
USP16-204ENST00000399976 CCL20P78556 96 aa5.42□□□□□ -1.54
USP16-204ENST00000399976 RRN3P1Q2M238 152 aa5.42□□□□□ -1.54
USP16-204ENST00000399976 TMEM88Q6PEY1 159 aa5.42□□□□□ -1.54
USP16-204ENST00000399976 GSN-AS1Q9NRJ2 163 aa5.42□□□□□ -1.54
USP16-204ENST00000399976 NOTCH3Q9UM47 2321 aa5.42□□□□□ -1.54
USP16-204ENST00000399976 IGKV2-40A0A087WW87 121 aaPredicted RBP5.42□□□□□ -1.54
USP16-204ENST00000399976 C1orf196B1AJZ1 125 aa5.42□□□□□ -1.54
USP16-204ENST00000399976 PAGE4O60829 102 aa5.42□□□□□ -1.54
USP16-204ENST00000399976 IGKV2D-40P01614 121 aaPredicted RBP5.42□□□□□ -1.54
USP16-204ENST00000399976 PFN1P07737 140 aaKnown RBP5.42□□□□□ -1.54
USP16-204ENST00000399976 AKR1C3P42330 323 aa5.42□□□□□ -1.54
USP16-204ENST00000399976 RPL35P42766 123 aaKnown RBP5.42□□□□□ -1.54
USP16-204ENST00000399976 SRSF3P84103 164 aaKnown RBP5.42□□□□□ -1.54
USP16-204ENST00000399976 ZNF674Q2M3X9 581 aa5.42□□□□□ -1.54
USP16-204ENST00000399976 GOLT1AQ6ZVE7 132 aa5.42□□□□□ -1.54
USP16-204ENST00000399976 PLAC8L1A1L4L8 177 aa5.41□□□□□ -1.54
USP16-204ENST00000399976 H3BNG1 76 aa5.41□□□□□ -1.54
USP16-204ENST00000399976 GPX1P07203 203 aa5.41□□□□□ -1.54
USP16-204ENST00000399976 SFTA3P0C7M3 94 aa5.41□□□□□ -1.54
USP16-204ENST00000399976 TCL1AP56279 114 aa5.41□□□□□ -1.54
USP16-204ENST00000399976 SPINK13Q1W4C9 94 aa5.41□□□□□ -1.54
USP16-204ENST00000399976 LINC01559Q495D7 138 aa5.41□□□□□ -1.54
USP16-204ENST00000399976 IGFL4Q6B9Z1 124 aa5.41□□□□□ -1.54
USP16-204ENST00000399976 NOTCH1P46531 2555 aa5.41□□□□□ -1.54
USP16-204ENST00000399976 IGHV1OR15-1A0A075B7D0 117 aa5.41□□□□□ -1.54
USP16-204ENST00000399976 NUPR2A6NF83 97 aa5.41□□□□□ -1.54
USP16-204ENST00000399976 RBFOX3A6NFN3 312 aa5.41□□□□□ -1.54
USP16-204ENST00000399976 PRSS47A8MTI9 375 aa5.41□□□□□ -1.54
USP16-204ENST00000399976 S100A6P06703 90 aa5.41□□□□□ -1.54
USP16-204ENST00000399976 FGF8P55075 233 aaPredicted RBP5.41□□□□□ -1.54
USP16-204ENST00000399976 XCL2Q9UBD3 114 aa5.41□□□□□ -1.54
USP16-204ENST00000399976 AGRNO00468 2067 aa5.41□□□□□ -1.54
USP16-204ENST00000399976 IGHV4-28A0A0C4DH34 117 aa5.4□□□□□ -1.54
USP16-204ENST00000399976 H3BTX0 84 aa5.4□□□□□ -1.54
USP16-204ENST00000399976 RBMY1A1P0DJD3 496 aaKnown RBP5.4□□□□□ -1.54
USP16-204ENST00000399976 RBMY1CP0DJD4 496 aa5.4□□□□□ -1.54
USP16-204ENST00000399976 UBE2G1P62253 170 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms