RNA–Protein interactions for RNA: ENST00000398738.2

PTCHD4-202, Transcript of patched domain containing 4, humanhuman

TSL 1 (best)

Gene PTCHD4, Length 3,232 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-202ENST00000398738 SMIM17P0DL12 118 aa7.7□□□□□ -1.18
PTCHD4-202ENST00000398738 ZNF493Q6ZR52 646 aa7.7□□□□□ -1.18
PTCHD4-202ENST00000398738 RNF182Q8N6D2 247 aa7.7□□□□□ -1.18
PTCHD4-202ENST00000398738 ZNF418Q8TF45 676 aaPredicted RBP7.7□□□□□ -1.18
PTCHD4-202ENST00000398738 DPF1Q92782 380 aa7.7□□□□□ -1.18
PTCHD4-202ENST00000398738 PRR25Q96S07 402 aa7.7□□□□□ -1.18
PTCHD4-202ENST00000398738 SPANXB1Q9NS25 103 aaPredicted RBP7.7□□□□□ -1.18
PTCHD4-202ENST00000398738 ONECUT1Q9UBC0 465 aa7.7□□□□□ -1.18
PTCHD4-202ENST00000398738 LOC107984156A0A0G2JMH3 177 aa7.7□□□□□ -1.18
PTCHD4-202ENST00000398738 A0A1B0GV72 72 aa7.7□□□□□ -1.18
PTCHD4-202ENST00000398738 NCBP2LA6PVI3 153 aaKnown RBP7.7□□□□□ -1.18
PTCHD4-202ENST00000398738 TIMM23O14925 209 aa7.7□□□□□ -1.18
PTCHD4-202ENST00000398738 DPM2O94777 84 aa7.7□□□□□ -1.18
PTCHD4-202ENST00000398738 GAGE13Q4V321 117 aa7.7□□□□□ -1.18
PTCHD4-202ENST00000398738 ARL17AQ8IVW1 177 aa7.7□□□□□ -1.18
PTCHD4-202ENST00000398738 ANKRD11Q6UB99 2663 aaPredicted RBP7.7□□□□□ -1.18
PTCHD4-202ENST00000398738 C12orf74Q32Q52 190 aa7.69□□□□□ -1.18
PTCHD4-202ENST00000398738 TMEM30BQ3MIR4 351 aa7.69□□□□□ -1.18
PTCHD4-202ENST00000398738 ATP6V0BQ99437 205 aa7.69□□□□□ -1.18
PTCHD4-202ENST00000398738 MBD3L4A6NDZ8 208 aaPredicted RBP7.69□□□□□ -1.18
PTCHD4-202ENST00000398738 MBD3L3A6NE82 208 aaPredicted RBP7.69□□□□□ -1.18
PTCHD4-202ENST00000398738 MBD3L5A6NJ08 208 aaPredicted RBP7.69□□□□□ -1.18
PTCHD4-202ENST00000398738 TRGV3P03979 118 aa7.69□□□□□ -1.18
PTCHD4-202ENST00000398738 GFRALQ6UXV0 394 aa7.69□□□□□ -1.18
PTCHD4-202ENST00000398738 FOXI2Q6ZQN5 318 aa7.69□□□□□ -1.18
PTCHD4-202ENST00000398738 Q6ZQT7 251 aa7.69□□□□□ -1.18
PTCHD4-202ENST00000398738 MBD3L2Q8NHZ7 208 aaPredicted RBP7.69□□□□□ -1.18
PTCHD4-202ENST00000398738 PRAC2D3DTV9 90 aa7.69□□□□□ -1.18
PTCHD4-202ENST00000398738 LY6HO94772 140 aa7.69□□□□□ -1.18
PTCHD4-202ENST00000398738 TMEM155Q4W5P6 130 aa7.69□□□□□ -1.18
PTCHD4-202ENST00000398738 TTC9CQ8N5M4 171 aa7.69□□□□□ -1.18
PTCHD4-202ENST00000398738 MYOZ3Q8TDC0 251 aa7.69□□□□□ -1.18
PTCHD4-202ENST00000398738 TRAV26-1A0A087WT03 109 aa7.68□□□□□ -1.18
PTCHD4-202ENST00000398738 DTX2Q86UW9 622 aa7.68□□□□□ -1.18
PTCHD4-202ENST00000398738 PTH2Q96A98 100 aa7.68□□□□□ -1.18
PTCHD4-202ENST00000398738 U3KQK5 164 aa7.68□□□□□ -1.18
PTCHD4-202ENST00000398738 BUB1B-PAK6H3BSN5 160 aa7.68□□□□□ -1.18
PTCHD4-202ENST00000398738 K7EM74 188 aa7.68□□□□□ -1.18
PTCHD4-202ENST00000398738 RNF185Q96GF1 192 aa7.68□□□□□ -1.18
PTCHD4-202ENST00000398738 ZFHX2Q9C0A1 2572 aaPredicted RBP7.68□□□□□ -1.18
PTCHD4-202ENST00000398738 PHLDA1Q8WV24 401 aaPredicted RBP7.67□□□□□ -1.18
PTCHD4-202ENST00000398738 NDUFS8O00217 210 aa7.67□□□□□ -1.18
PTCHD4-202ENST00000398738 APOMO95445 188 aa7.67□□□□□ -1.18
PTCHD4-202ENST00000398738 EMP1P54849 157 aa7.67□□□□□ -1.18
PTCHD4-202ENST00000398738 PAX8Q06710 450 aa7.67□□□□□ -1.18
PTCHD4-202ENST00000398738 KLRD1Q13241 179 aa7.67□□□□□ -1.18
PTCHD4-202ENST00000398738 GLMPQ8WWB7 406 aa7.67□□□□□ -1.18
PTCHD4-202ENST00000398738 BMI1P35226 326 aa7.67□□□□□ -1.18
PTCHD4-202ENST00000398738 IL17RELQ6ZVW7 336 aa7.67□□□□□ -1.18
PTCHD4-202ENST00000398738 SYT8Q8NBV8 401 aa7.67□□□□□ -1.18
PTCHD4-202ENST00000398738 DEFB124Q8NES8 71 aa7.67□□□□□ -1.18
PTCHD4-202ENST00000398738 HIF1ANQ9NWT6 349 aa7.67□□□□□ -1.18
PTCHD4-202ENST00000398738 MRPL16Q9NX20 251 aaKnown RBP7.67□□□□□ -1.18
PTCHD4-202ENST00000398738 DCHS2Q6V1P9 2916 aa7.66□□□□□ -1.18
PTCHD4-202ENST00000398738 E9PLD3 99 aa7.66□□□□□ -1.18
PTCHD4-202ENST00000398738 PSMB2P49721 201 aa7.66□□□□□ -1.18
PTCHD4-202ENST00000398738 SCGB1D4Q6XE38 83 aa7.66□□□□□ -1.18
PTCHD4-202ENST00000398738 DYNAPQ8N1N2 210 aa7.66□□□□□ -1.18
PTCHD4-202ENST00000398738 LINC00311Q8N616 119 aa7.66□□□□□ -1.18
PTCHD4-202ENST00000398738 RALYQ9UKM9 306 aaKnown RBP7.66□□□□□ -1.18
PTCHD4-202ENST00000398738 F8W1H4 67 aa7.66□□□□□ -1.18
PTCHD4-202ENST00000398738 H3BVH4 76 aa7.66□□□□□ -1.18
PTCHD4-202ENST00000398738 CRYGBP07316 175 aa7.66□□□□□ -1.18
PTCHD4-202ENST00000398738 DLX6P56179 175 aa7.66□□□□□ -1.18
PTCHD4-202ENST00000398738 RNASE6Q93091 150 aaKnown RBP7.66□□□□□ -1.18
PTCHD4-202ENST00000398738 VKORC1Q9BQB6 163 aa7.66□□□□□ -1.18
PTCHD4-202ENST00000398738 FABP5P3A8MUU1 101 aa7.65□□□□□ -1.18
PTCHD4-202ENST00000398738 SRSF9Q13242 221 aaKnown RBP eCLIP7.65□□□□□ -1.18
PTCHD4-202ENST00000398738 SPANXN1Q5VSR9 72 aa7.65□□□□□ -1.18
PTCHD4-202ENST00000398738 CFHR4Q92496 578 aa7.65□□□□□ -1.18
PTCHD4-202ENST00000398738 NXT2Q9NPJ8 142 aaKnown RBP7.65□□□□□ -1.18
PTCHD4-202ENST00000398738 MAP1AP78559 2803 aaPredicted RBP7.65□□□□□ -1.18
PTCHD4-202ENST00000398738 MRPS12O15235 138 aaKnown RBP7.65□□□□□ -1.18
PTCHD4-202ENST00000398738 MFAP4P55083 255 aa7.65□□□□□ -1.18
PTCHD4-202ENST00000398738 PVRIGQ6DKI7 326 aa7.65□□□□□ -1.18
PTCHD4-202ENST00000398738 LYPD1Q8N2G4 141 aa7.65□□□□□ -1.18
PTCHD4-202ENST00000398738 ZNF502Q8TBZ5 544 aa7.65□□□□□ -1.18
PTCHD4-202ENST00000398738 TLN1Q9Y490 2541 aaKnown RBP7.65□□□□□ -1.18
PTCHD4-202ENST00000398738 COL6A6A6NMZ7 2263 aa7.65□□□□□ -1.19
PTCHD4-202ENST00000398738 OR11H12B2RN74 326 aa7.65□□□□□ -1.19
PTCHD4-202ENST00000398738 OR11H1Q8NG94 326 aa7.65□□□□□ -1.19
PTCHD4-202ENST00000398738 OR11H2Q8NH07 326 aa7.65□□□□□ -1.19
PTCHD4-202ENST00000398738 C21orf62Q9NYP8 219 aa7.65□□□□□ -1.19
PTCHD4-202ENST00000398738 LINC01549A6NIU2 74 aa7.64□□□□□ -1.19
PTCHD4-202ENST00000398738 LINC01548A6NM66 108 aa7.64□□□□□ -1.19
PTCHD4-202ENST00000398738 IGLV1-47P01700 117 aa7.64□□□□□ -1.19
PTCHD4-202ENST00000398738 HLA-DRB4P13762 266 aa7.64□□□□□ -1.19
PTCHD4-202ENST00000398738 RPL7P18124 248 aaKnown RBP7.64□□□□□ -1.19
PTCHD4-202ENST00000398738 CRYBA4P53673 196 aa7.64□□□□□ -1.19
PTCHD4-202ENST00000398738 GATD1Q8NB37 220 aa7.64□□□□□ -1.19
PTCHD4-202ENST00000398738 SRSF8Q9BRL6 282 aaKnown RBP7.64□□□□□ -1.19
PTCHD4-202ENST00000398738 GEMIN7Q9H840 131 aaKnown RBP7.64□□□□□ -1.19
PTCHD4-202ENST00000398738 HLA-DRB4X5D2U9 266 aa7.64□□□□□ -1.19
PTCHD4-202ENST00000398738 ANKHD1Q8IWZ3 2542 aaKnown RBP7.64□□□□□ -1.19
PTCHD4-202ENST00000398738 M0R381 172 aa7.64□□□□□ -1.19
PTCHD4-202ENST00000398738 SPINK8P0C7L1 97 aa7.64□□□□□ -1.19
PTCHD4-202ENST00000398738 ZNF883P0CG24 379 aa7.64□□□□□ -1.19
PTCHD4-202ENST00000398738 ZFP2Q6ZN57 461 aa7.64□□□□□ -1.19
PTCHD4-202ENST00000398738 TM2D2Q9BX73 214 aa7.64□□□□□ -1.19
PTCHD4-202ENST00000398738 HIGD1BQ9P298 99 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms