RNA–Protein interactions for RNA: ENST00000398568.6

CYLD-202, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYLD, Length 3,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-202ENST00000398568 BRI3O95415 125 aa11.79□□□□□ -0.52
CYLD-202ENST00000398568 APELAP0DMC3 54 aa11.79□□□□□ -0.52
CYLD-202ENST00000398568 RUSC1-AS1Q66K80 236 aa11.79□□□□□ -0.52
CYLD-202ENST00000398568 LYPD1Q8N2G4 141 aa11.79□□□□□ -0.52
CYLD-202ENST00000398568 M0R3E3 92 aa11.78□□□□□ -0.52
CYLD-202ENST00000398568 TMEM30BQ3MIR4 351 aa11.78□□□□□ -0.52
CYLD-202ENST00000398568 FAM201AQ5SY85 155 aa11.78□□□□□ -0.52
CYLD-202ENST00000398568 LINC01548A6NM66 108 aa11.78□□□□□ -0.52
CYLD-202ENST00000398568 K7ENP7 123 aa11.78□□□□□ -0.52
CYLD-202ENST00000398568 TCL1BO95988 128 aa11.78□□□□□ -0.52
CYLD-202ENST00000398568 FAM159AQ6UWV7 190 aa11.78□□□□□ -0.52
CYLD-202ENST00000398568 RASL11BQ9BPW5 248 aa11.78□□□□□ -0.52
CYLD-202ENST00000398568 PROCRQ9UNN8 238 aa11.78□□□□□ -0.52
CYLD-202ENST00000398568 CENPVL3A0A0U1RRI6 287 aa11.78□□□□□ -0.52
CYLD-202ENST00000398568 LINC01546A6NGU7 62 aa11.78□□□□□ -0.52
CYLD-202ENST00000398568 ZNF833PQ6ZTB9 187 aa11.78□□□□□ -0.52
CYLD-202ENST00000398568 OR11H6Q8NGC7 330 aa11.78□□□□□ -0.52
CYLD-202ENST00000398568 NAV3Q8IVL0 2385 aa11.78□□□□□ -0.52
CYLD-202ENST00000398568 BSNQ9UPA5 3926 aa11.78□□□□□ -0.52
CYLD-202ENST00000398568 TRAV4A0A0B4J268 109 aa11.77□□□□□ -0.52
CYLD-202ENST00000398568 H7C1H1 209 aa11.77□□□□□ -0.52
CYLD-202ENST00000398568 UBE2D3P61077 147 aa11.77□□□□□ -0.52
CYLD-202ENST00000398568 UBE2D2P62837 147 aa11.77□□□□□ -0.52
CYLD-202ENST00000398568 MEIG1Q5JSS6 88 aa11.77□□□□□ -0.52
CYLD-202ENST00000398568 SIGLEC15Q6ZMC9 328 aa11.77□□□□□ -0.52
CYLD-202ENST00000398568 PCNX1Q96RV3 2341 aa11.77□□□□□ -0.53
CYLD-202ENST00000398568 ARFGEF3Q5TH69 2177 aa11.77□□□□□ -0.53
CYLD-202ENST00000398568 LGALS1P09382 135 aaKnown RBP11.77□□□□□ -0.53
CYLD-202ENST00000398568 MYO18BQ8IUG5 2567 aa11.77□□□□□ -0.53
CYLD-202ENST00000398568 LAGE3Q14657 143 aa11.77□□□□□ -0.53
CYLD-202ENST00000398568 RNF185Q96GF1 192 aa11.77□□□□□ -0.53
CYLD-202ENST00000398568 AJUBAQ96IF1 538 aa11.77□□□□□ -0.53
CYLD-202ENST00000398568 FAM208BQ5VWN6 2430 aa11.77□□□□□ -0.53
CYLD-202ENST00000398568 INTS1Q8N201 2190 aaKnown RBP11.77□□□□□ -0.53
CYLD-202ENST00000398568 ZNF462Q96JM2 2506 aa11.76□□□□□ -0.53
CYLD-202ENST00000398568 ZNF815PA8K554 130 aa11.76□□□□□ -0.53
CYLD-202ENST00000398568 ORM1P02763 201 aa11.76□□□□□ -0.53
CYLD-202ENST00000398568 MSRB1Q9NZV6 116 aa11.76□□□□□ -0.53
CYLD-202ENST00000398568 F8VRH5 84 aa11.76□□□□□ -0.53
CYLD-202ENST00000398568 ENSAO43768 121 aaKnown RBP11.76□□□□□ -0.53
CYLD-202ENST00000398568 GAS8-AS1O95177 125 aa11.76□□□□□ -0.53
CYLD-202ENST00000398568 GATA1P15976 413 aaPredicted RBP11.76□□□□□ -0.53
CYLD-202ENST00000398568 DEFB127Q9H1M4 99 aa11.76□□□□□ -0.53
CYLD-202ENST00000398568 EGR2P11161 476 aaPredicted RBP11.75□□□□□ -0.53
CYLD-202ENST00000398568 RPL27AP46776 148 aaKnown RBP11.75□□□□□ -0.53
CYLD-202ENST00000398568 DUX4L9Q6RFH8 374 aaPredicted RBP11.75□□□□□ -0.53
CYLD-202ENST00000398568 CECR9P0C854 216 aa11.75□□□□□ -0.53
CYLD-202ENST00000398568 UBE2D1P51668 147 aa11.75□□□□□ -0.53
CYLD-202ENST00000398568 ONECUT1Q9UBC0 465 aa11.75□□□□□ -0.53
CYLD-202ENST00000398568 SPRY3O43610 288 aa11.74□□□□□ -0.53
CYLD-202ENST00000398568 SLC25A20O43772 301 aa11.74□□□□□ -0.53
CYLD-202ENST00000398568 SBSPONQ8IVN8 264 aa11.74□□□□□ -0.53
CYLD-202ENST00000398568 CCL13Q99616 98 aa11.74□□□□□ -0.53
CYLD-202ENST00000398568 Q6Q795 121 aa11.74□□□□□ -0.53
CYLD-202ENST00000398568 VKORC1Q9BQB6 163 aa11.74□□□□□ -0.53
CYLD-202ENST00000398568 ABCA1O95477 2261 aa11.74□□□□□ -0.53
CYLD-202ENST00000398568 SHANK2-AS3Q9BTD1 123 aa11.74□□□□□ -0.53
CYLD-202ENST00000398568 ID1P41134 155 aa11.73□□□□□ -0.53
CYLD-202ENST00000398568 C9JAW5 83 aa11.73□□□□□ -0.53
CYLD-202ENST00000398568 CNEP1R1Q8N9A8 125 aa11.73□□□□□ -0.53
CYLD-202ENST00000398568 OR10J6PQ8NGY7 276 aa11.73□□□□□ -0.53
CYLD-202ENST00000398568 DKK4Q9UBT3 224 aa11.73□□□□□ -0.53
CYLD-202ENST00000398568 IGKV3-15P01624 115 aa11.73□□□□□ -0.53
CYLD-202ENST00000398568 EFNA4P52798 201 aa11.73□□□□□ -0.53
CYLD-202ENST00000398568 TPSG1Q9NRR2 321 aa11.73□□□□□ -0.53
CYLD-202ENST00000398568 CRLF1O75462 422 aa11.72□□□□□ -0.53
CYLD-202ENST00000398568 PRADC1Q9BSG0 188 aa11.72□□□□□ -0.53
CYLD-202ENST00000398568 PRB1P04280 392 aa11.72□□□□□ -0.53
CYLD-202ENST00000398568 IGLC6P0CF74 106 aa11.72□□□□□ -0.53
CYLD-202ENST00000398568 VPREB3Q9UKI3 123 aa11.72□□□□□ -0.53
CYLD-202ENST00000398568 TRAV8-4A0A0B4J246 113 aa11.72□□□□□ -0.53
CYLD-202ENST00000398568 NDUFA11Q86Y39 141 aa11.72□□□□□ -0.53
CYLD-202ENST00000398568 FAM216BQ8N7L0 139 aa11.72□□□□□ -0.53
CYLD-202ENST00000398568 TMEM126AQ9H061 195 aa11.72□□□□□ -0.53
CYLD-202ENST00000398568 RNF7Q9UBF6 113 aa11.71□□□□□ -0.53
CYLD-202ENST00000398568 IGKV2-40A0A087WW87 121 aaPredicted RBP11.71□□□□□ -0.54
CYLD-202ENST00000398568 J3KRW8 73 aa11.71□□□□□ -0.54
CYLD-202ENST00000398568 IGKV2D-40P01614 121 aaPredicted RBP11.71□□□□□ -0.54
CYLD-202ENST00000398568 Q6ZT83 130 aa11.71□□□□□ -0.54
CYLD-202ENST00000398568 DTX2Q86UW9 622 aa11.71□□□□□ -0.54
CYLD-202ENST00000398568 C15orf53Q8NAA6 179 aa11.71□□□□□ -0.54
CYLD-202ENST00000398568 PLXNB1O43157 2135 aa11.71□□□□□ -0.54
CYLD-202ENST00000398568 TRAV12-1A0A0B4J245 112 aa11.7□□□□□ -0.54
CYLD-202ENST00000398568 SPRNQ5BIV9 151 aa11.7□□□□□ -0.54
CYLD-202ENST00000398568 SCGB3A1Q96QR1 104 aa11.7□□□□□ -0.54
CYLD-202ENST00000398568 PRR25Q96S07 402 aa11.7□□□□□ -0.54
CYLD-202ENST00000398568 FASNP49327 2511 aaKnown RBP11.7□□□□□ -0.54
CYLD-202ENST00000398568 H3BRN7 92 aa11.7□□□□□ -0.54
CYLD-202ENST00000398568 CEACAM4O75871 244 aa11.7□□□□□ -0.54
CYLD-202ENST00000398568 IGLV2-23P01705 113 aa11.7□□□□□ -0.54
CYLD-202ENST00000398568 UCNP55089 124 aa11.7□□□□□ -0.54
CYLD-202ENST00000398568 KLK15Q9H2R5 256 aa11.7□□□□□ -0.54
CYLD-202ENST00000398568 TRGV5A0A0B4J1U4 118 aa11.7□□□□□ -0.54
CYLD-202ENST00000398568 ZGRF1Q86YA3 2104 aa11.7□□□□□ -0.54
CYLD-202ENST00000398568 SLC25A16P16260 332 aa11.69□□□□□ -0.54
CYLD-202ENST00000398568 GAFA1Q96PS6 74 aa11.69□□□□□ -0.54
CYLD-202ENST00000398568 LINC00574Q9H8X3 128 aa11.69□□□□□ -0.54
CYLD-202ENST00000398568 PRR14LQ5THK1 2151 aa11.69□□□□□ -0.54
CYLD-202ENST00000398568 SPTBN1Q01082 2364 aaKnown RBP11.69□□□□□ -0.54
CYLD-202ENST00000398568 LHBP01229 141 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms