RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 Q6ZWC4 215 aa17.21■□□□□ 0.34
TSPAN4-203ENST00000397397 COMMD7Q86VX2 200 aa17.21■□□□□ 0.34
TSPAN4-203ENST00000397397 BAGE2Q86Y30 109 aa17.21■□□□□ 0.34
TSPAN4-203ENST00000397397 B9D2Q9BPU9 175 aa17.21■□□□□ 0.34
TSPAN4-203ENST00000397397 PARLQ9H300 379 aa17.21■□□□□ 0.34
TSPAN4-203ENST00000397397 C7orf71A4D174 169 aa17.2■□□□□ 0.34
TSPAN4-203ENST00000397397 CENPWQ5EE01 88 aa17.2■□□□□ 0.34
TSPAN4-203ENST00000397397 CSNK1G2-AS1Q8NCQ2 148 aa17.2■□□□□ 0.34
TSPAN4-203ENST00000397397 TRAV12-3A0A0B4J271 114 aa17.19■□□□□ 0.34
TSPAN4-203ENST00000397397 SMUG1Q53HV7 270 aa17.19■□□□□ 0.34
TSPAN4-203ENST00000397397 NHLRC2Q8NBF2 726 aa17.19■□□□□ 0.34
TSPAN4-203ENST00000397397 RCHY1Q96PM5 261 aa17.19■□□□□ 0.34
TSPAN4-203ENST00000397397 GNG4P50150 75 aa17.18■□□□□ 0.34
TSPAN4-203ENST00000397397 TMEM183AQ8IXX5 376 aa17.18■□□□□ 0.34
TSPAN4-203ENST00000397397 GOLT1BQ9Y3E0 138 aa17.18■□□□□ 0.34
TSPAN4-203ENST00000397397 GCGP01275 180 aa17.17■□□□□ 0.34
TSPAN4-203ENST00000397397 RBMY1A1P0DJD3 496 aaKnown RBP17.17■□□□□ 0.34
TSPAN4-203ENST00000397397 RBMY1CP0DJD4 496 aa17.17■□□□□ 0.34
TSPAN4-203ENST00000397397 RBMY1FQ15415 496 aaKnown RBP17.17■□□□□ 0.34
TSPAN4-203ENST00000397397 C1orf158Q8N1D5 194 aa17.17■□□□□ 0.34
TSPAN4-203ENST00000397397 RNF183Q96D59 192 aa17.17■□□□□ 0.34
TSPAN4-203ENST00000397397 TMEM208Q9BTX3 173 aa17.17■□□□□ 0.34
TSPAN4-203ENST00000397397 RETNQ9HD89 108 aa17.17■□□□□ 0.34
TSPAN4-203ENST00000397397 IGHV3OR16-12A0A075B7B8 117 aa17.16■□□□□ 0.34
TSPAN4-203ENST00000397397 SPRY2O43597 315 aa17.16■□□□□ 0.34
TSPAN4-203ENST00000397397 SMIM7Q9BQ49 75 aa17.16■□□□□ 0.34
TSPAN4-203ENST00000397397 C20orf144Q9BQM9 153 aa17.16■□□□□ 0.34
TSPAN4-203ENST00000397397 NIPSNAP3BQ9BS92 247 aa17.16■□□□□ 0.34
TSPAN4-203ENST00000397397 TRBV20OR9-2A0A075B6H5 130 aa17.15■□□□□ 0.34
TSPAN4-203ENST00000397397 ZNF727A8MUV8 499 aa17.15■□□□□ 0.34
TSPAN4-203ENST00000397397 ZNF80P51504 273 aaPredicted RBP17.15■□□□□ 0.34
TSPAN4-203ENST00000397397 UQCC3Q6UW78 93 aa17.15■□□□□ 0.34
TSPAN4-203ENST00000397397 ZC2HC1AQ96GY0 325 aa17.15■□□□□ 0.34
TSPAN4-203ENST00000397397 SPATA25Q9BR10 227 aa17.15■□□□□ 0.34
TSPAN4-203ENST00000397397 TM2D3Q9BRN9 247 aa17.15■□□□□ 0.34
TSPAN4-203ENST00000397397 TGP01266 2768 aa17.15■□□□□ 0.34
TSPAN4-203ENST00000397397 C9JCJ5 164 aa17.14■□□□□ 0.33
TSPAN4-203ENST00000397397 Q6AWC8 147 aa17.14■□□□□ 0.33
TSPAN4-203ENST00000397397 Q6ZQT7 251 aa17.14■□□□□ 0.33
TSPAN4-203ENST00000397397 COX8CQ7Z4L0 72 aa17.14■□□□□ 0.33
TSPAN4-203ENST00000397397 LINC01587Q99440 93 aa17.14■□□□□ 0.33
TSPAN4-203ENST00000397397 OVOL2Q9BRP0 275 aa17.14■□□□□ 0.33
TSPAN4-203ENST00000397397 MLST8Q9BVC4 326 aa17.14■□□□□ 0.33
TSPAN4-203ENST00000397397 TP53TG1Q9Y2A0 90 aa17.14■□□□□ 0.33
TSPAN4-203ENST00000397397 TRAV21A0A0B4J279 112 aa17.13■□□□□ 0.33
TSPAN4-203ENST00000397397 PGPEP1LA6NFU8 196 aa17.13■□□□□ 0.33
TSPAN4-203ENST00000397397 ZNF324O75467 553 aaPredicted RBP17.13■□□□□ 0.33
TSPAN4-203ENST00000397397 IGLV2-8P01709 118 aa17.13■□□□□ 0.33
TSPAN4-203ENST00000397397 MGST1P10620 155 aaKnown RBP17.13■□□□□ 0.33
TSPAN4-203ENST00000397397 SOHLH1Q5JUK2 328 aa17.13■□□□□ 0.33
TSPAN4-203ENST00000397397 TMEM256Q8N2U0 113 aa17.13■□□□□ 0.33
TSPAN4-203ENST00000397397 SFTA3P0C7M3 94 aa17.13■□□□□ 0.33
TSPAN4-203ENST00000397397 FAM74A3Q4VXF1 159 aa17.13■□□□□ 0.33
TSPAN4-203ENST00000397397 ZNF705AQ6ZN79 300 aaPredicted RBP17.13■□□□□ 0.33
TSPAN4-203ENST00000397397 EIF4E3Q8N5X7 224 aaKnown RBP17.13■□□□□ 0.33
TSPAN4-203ENST00000397397 ZMAT4Q9H898 229 aa17.13■□□□□ 0.33
TSPAN4-203ENST00000397397 H7BYZ3 331 aa17.12■□□□□ 0.33
TSPAN4-203ENST00000397397 OR11H2Q8NH07 326 aa17.12■□□□□ 0.33
TSPAN4-203ENST00000397397 SMIM12Q96EX1 92 aa17.12■□□□□ 0.33
TSPAN4-203ENST00000397397 PFN1P07737 140 aaKnown RBP17.11■□□□□ 0.33
TSPAN4-203ENST00000397397 PRR27Q6MZM9 219 aa17.11■□□□□ 0.33
TSPAN4-203ENST00000397397 FABP5P3A8MUU1 101 aa17.1■□□□□ 0.33
TSPAN4-203ENST00000397397 CRIP1P50238 77 aa17.1■□□□□ 0.33
TSPAN4-203ENST00000397397 FAM162BQ5T6X4 162 aa17.1■□□□□ 0.33
TSPAN4-203ENST00000397397 OCC1Q8TAD7 63 aa17.1■□□□□ 0.33
TSPAN4-203ENST00000397397 SH2D1AO60880 128 aa17.09■□□□□ 0.33
TSPAN4-203ENST00000397397 HTN1P15515 57 aa17.09■□□□□ 0.33
TSPAN4-203ENST00000397397 MUC21Q5SSG8 566 aa17.09■□□□□ 0.33
TSPAN4-203ENST00000397397 PYGO2Q9BRQ0 406 aa17.09■□□□□ 0.33
TSPAN4-203ENST00000397397 NAGKQ9UJ70 344 aa17.09■□□□□ 0.33
TSPAN4-203ENST00000397397 X6R8D5 127 aa17.09■□□□□ 0.33
TSPAN4-203ENST00000397397 ZNF705GA8MUZ8 300 aaPredicted RBP17.08■□□□□ 0.32
TSPAN4-203ENST00000397397 NHLRC4P0CG21 123 aaPredicted RBP17.08■□□□□ 0.32
TSPAN4-203ENST00000397397 TMEM241Q24JQ0 296 aa17.08■□□□□ 0.32
TSPAN4-203ENST00000397397 LY96Q9Y6Y9 160 aa17.08■□□□□ 0.32
TSPAN4-203ENST00000397397 DNAH9Q9NYC9 4486 aa17.07■□□□□ 0.32
TSPAN4-203ENST00000397397 IGHV1OR15-1A0A075B7D0 117 aa17.07■□□□□ 0.32
TSPAN4-203ENST00000397397 PRM2P04554 102 aa17.07■□□□□ 0.32
TSPAN4-203ENST00000397397 NEU1Q99519 415 aa17.07■□□□□ 0.32
TSPAN4-203ENST00000397397 BIN3Q9NQY0 253 aa17.07■□□□□ 0.32
TSPAN4-203ENST00000397397 NAT8Q9UHE5 227 aa17.07■□□□□ 0.32
TSPAN4-203ENST00000397397 K7EN84 100 aa17.06■□□□□ 0.32
TSPAN4-203ENST00000397397 OR5I1Q13606 314 aa17.06■□□□□ 0.32
TSPAN4-203ENST00000397397 FAM159AQ6UWV7 190 aa17.06■□□□□ 0.32
TSPAN4-203ENST00000397397 C11orf21Q9P2W6 132 aa17.06■□□□□ 0.32
TSPAN4-203ENST00000397397 TMEM218A2RU14 115 aa17.05■□□□□ 0.32
TSPAN4-203ENST00000397397 SMIM9A6NGZ8 99 aa17.05■□□□□ 0.32
TSPAN4-203ENST00000397397 RRN3P1Q2M238 152 aa17.05■□□□□ 0.32
TSPAN4-203ENST00000397397 LINC00467Q9BRT7 94 aa17.05■□□□□ 0.32
TSPAN4-203ENST00000397397 NBEAL2Q6ZNJ1 2754 aa17.05■□□□□ 0.32
TSPAN4-203ENST00000397397 CBY3A6NI87 242 aa17.04■□□□□ 0.32
TSPAN4-203ENST00000397397 ANXA2RQ3ZCQ2 193 aa17.04■□□□□ 0.32
TSPAN4-203ENST00000397397 LINC01551Q86U37 167 aa17.04■□□□□ 0.32
TSPAN4-203ENST00000397397 DAZAP1Q96EP5 407 aaKnown RBP17.04■□□□□ 0.32
TSPAN4-203ENST00000397397 ORM1P02763 201 aa17.04■□□□□ 0.32
TSPAN4-203ENST00000397397 MIFP14174 115 aa17.04■□□□□ 0.32
TSPAN4-203ENST00000397397 AZU1P20160 251 aa17.04■□□□□ 0.32
TSPAN4-203ENST00000397397 KCNS1Q96KK3 526 aa17.03■□□□□ 0.32
TSPAN4-203ENST00000397397 TP53TG3Q9ULZ0 132 aa17.03■□□□□ 0.32
TSPAN4-203ENST00000397397 HUWE1Q7Z6Z7 4374 aaKnown RBP17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms