RNA–Protein interactions for RNA: ENST00000396081.5

HERPUD2-202, Transcript of HERPUD family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERPUD2, Length 3,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-202ENST00000396081 NDUFS8O00217 210 aa14.11□□□□□ -0.15
HERPUD2-202ENST00000396081 ZNF575Q86XF7 245 aa14.11□□□□□ -0.15
HERPUD2-202ENST00000396081 CFHR4Q92496 578 aa14.11□□□□□ -0.15
HERPUD2-202ENST00000396081 FANCD2OSQ96PS1 177 aa14.11□□□□□ -0.15
HERPUD2-202ENST00000396081 SPTA1P02549 2419 aa14.11□□□□□ -0.15
HERPUD2-202ENST00000396081 A0A0G2JNJ9 132 aa14.11□□□□□ -0.15
HERPUD2-202ENST00000396081 LAGE3Q14657 143 aa14.11□□□□□ -0.15
HERPUD2-202ENST00000396081 RRN3P1Q2M238 152 aa14.11□□□□□ -0.15
HERPUD2-202ENST00000396081 Q9UFV3 132 aa14.11□□□□□ -0.15
HERPUD2-202ENST00000396081 SMAD5-AS1Q9Y6J3 95 aa14.11□□□□□ -0.15
HERPUD2-202ENST00000396081 C20orf78Q9BR46 151 aa14.1□□□□□ -0.15
HERPUD2-202ENST00000396081 RIF1Q5UIP0 2472 aaKnown RBP14.1□□□□□ -0.15
HERPUD2-202ENST00000396081 APOMO95445 188 aa14.09□□□□□ -0.15
HERPUD2-202ENST00000396081 ATMQ13315 3056 aa14.09□□□□□ -0.15
HERPUD2-202ENST00000396081 OR11H12B2RN74 326 aa14.09□□□□□ -0.15
HERPUD2-202ENST00000396081 IGHG4P01861 327 aa14.09□□□□□ -0.15
HERPUD2-202ENST00000396081 SRSF1Q07955 248 aaKnown RBP eCLIP14.09□□□□□ -0.15
HERPUD2-202ENST00000396081 OR11H1Q8NG94 326 aa14.09□□□□□ -0.15
HERPUD2-202ENST00000396081 OR11H2Q8NH07 326 aa14.09□□□□□ -0.15
HERPUD2-202ENST00000396081 SPATA25Q9BR10 227 aa14.09□□□□□ -0.15
HERPUD2-202ENST00000396081 E7EQL1 145 aa14.09□□□□□ -0.15
HERPUD2-202ENST00000396081 KLRD1Q13241 179 aa14.09□□□□□ -0.15
HERPUD2-202ENST00000396081 SRSF8Q9BRL6 282 aaKnown RBP14.09□□□□□ -0.15
HERPUD2-202ENST00000396081 IGHV3-49A0A0A0MS15 119 aa14.08□□□□□ -0.16
HERPUD2-202ENST00000396081 FAM57AQ8TBR7 257 aa14.08□□□□□ -0.16
HERPUD2-202ENST00000396081 A0A087WX48 190 aa14.08□□□□□ -0.16
HERPUD2-202ENST00000396081 F8W735 103 aaPredicted RBP14.08□□□□□ -0.16
HERPUD2-202ENST00000396081 SPANXN1Q5VSR9 72 aa14.08□□□□□ -0.16
HERPUD2-202ENST00000396081 LOC107984156A0A0G2JMH3 177 aa14.07□□□□□ -0.16
HERPUD2-202ENST00000396081 ARL17AQ8IVW1 177 aa14.07□□□□□ -0.16
HERPUD2-202ENST00000396081 MRPL16Q9NX20 251 aaKnown RBP14.07□□□□□ -0.16
HERPUD2-202ENST00000396081 PGPEP1Q9NXJ5 209 aa14.07□□□□□ -0.16
HERPUD2-202ENST00000396081 TTC28Q96AY4 2481 aa14.07□□□□□ -0.16
HERPUD2-202ENST00000396081 IGLV11-55A0A075B6I3 123 aa14.07□□□□□ -0.16
HERPUD2-202ENST00000396081 J3KRW8 73 aa14.07□□□□□ -0.16
HERPUD2-202ENST00000396081 RNF5Q99942 180 aa14.07□□□□□ -0.16
HERPUD2-202ENST00000396081 IGKV3D-20A0A0C4DH25 116 aa14.06□□□□□ -0.16
HERPUD2-202ENST00000396081 NDPQ00604 133 aa14.06□□□□□ -0.16
HERPUD2-202ENST00000396081 COX8CQ7Z4L0 72 aa14.06□□□□□ -0.16
HERPUD2-202ENST00000396081 IGLV2-18A0A075B6J9 118 aa14.06□□□□□ -0.16
HERPUD2-202ENST00000396081 HOXA3O43365 443 aaPredicted RBP14.06□□□□□ -0.16
HERPUD2-202ENST00000396081 SPRY2O43597 315 aa14.06□□□□□ -0.16
HERPUD2-202ENST00000396081 TAL2Q16559 108 aa14.06□□□□□ -0.16
HERPUD2-202ENST00000396081 C5orf64Q2M2E5 130 aa14.06□□□□□ -0.16
HERPUD2-202ENST00000396081 ZNF502Q8TBZ5 544 aa14.06□□□□□ -0.16
HERPUD2-202ENST00000396081 CNFNQ9BYD5 112 aa14.06□□□□□ -0.16
HERPUD2-202ENST00000396081 C11orf21Q9P2W6 132 aa14.06□□□□□ -0.16
HERPUD2-202ENST00000396081 DPM3Q9P2X0 92 aa14.06□□□□□ -0.16
HERPUD2-202ENST00000396081 SYT8Q8NBV8 401 aa14.06□□□□□ -0.16
HERPUD2-202ENST00000396081 ZNF418Q8TF45 676 aaPredicted RBP14.06□□□□□ -0.16
HERPUD2-202ENST00000396081 ANKRD11Q6UB99 2663 aaPredicted RBP14.05□□□□□ -0.16
HERPUD2-202ENST00000396081 LINC01559Q495D7 138 aa14.05□□□□□ -0.16
HERPUD2-202ENST00000396081 Q6ZQT7 251 aa14.05□□□□□ -0.16
HERPUD2-202ENST00000396081 LINC01546A6NGU7 62 aa14.05□□□□□ -0.16
HERPUD2-202ENST00000396081 SCGB1D4Q6XE38 83 aa14.05□□□□□ -0.16
HERPUD2-202ENST00000396081 TRAV26-1A0A087WT03 109 aa14.04□□□□□ -0.16
HERPUD2-202ENST00000396081 CTSGP08311 255 aa14.04□□□□□ -0.16
HERPUD2-202ENST00000396081 PLNP26678 52 aa14.04□□□□□ -0.16
HERPUD2-202ENST00000396081 OTOGLQ3ZCN5 2332 aa14.04□□□□□ -0.16
HERPUD2-202ENST00000396081 MYMXA0A1B0GTQ4 84 aa14.04□□□□□ -0.16
HERPUD2-202ENST00000396081 LY6LH3BQJ8 138 aa14.04□□□□□ -0.16
HERPUD2-202ENST00000396081 Q6ZS92 163 aa14.04□□□□□ -0.16
HERPUD2-202ENST00000396081 SCGB3A1Q96QR1 104 aa14.04□□□□□ -0.16
HERPUD2-202ENST00000396081 PRO0461Q9UI25 63 aa14.04□□□□□ -0.16
HERPUD2-202ENST00000396081 TRBV7-3A0A075B6L6 115 aa14.04□□□□□ -0.16
HERPUD2-202ENST00000396081 LY6HO94772 140 aa14.04□□□□□ -0.16
HERPUD2-202ENST00000396081 PSMB2P49721 201 aa14.04□□□□□ -0.16
HERPUD2-202ENST00000396081 SRSF9Q13242 221 aaKnown RBP eCLIP14.04□□□□□ -0.16
HERPUD2-202ENST00000396081 VKORC1Q9BQB6 163 aa14.04□□□□□ -0.16
HERPUD2-202ENST00000396081 RAXQ9Y2V3 346 aa14.03□□□□□ -0.16
HERPUD2-202ENST00000396081 H7C1H1 209 aa14.03□□□□□ -0.16
HERPUD2-202ENST00000396081 NRACQ8N912 160 aa14.03□□□□□ -0.16
HERPUD2-202ENST00000396081 PRO3102Q9H379 93 aa14.03□□□□□ -0.16
HERPUD2-202ENST00000396081 HIF1ANQ9NWT6 349 aa14.03□□□□□ -0.16
HERPUD2-202ENST00000396081 ANKHD1Q8IWZ3 2542 aaKnown RBP14.03□□□□□ -0.16
HERPUD2-202ENST00000396081 LINC01549A6NIU2 74 aa14.02□□□□□ -0.16
HERPUD2-202ENST00000396081 F8VRH5 84 aa14.02□□□□□ -0.16
HERPUD2-202ENST00000396081 H3BVH4 76 aa14.02□□□□□ -0.16
HERPUD2-202ENST00000396081 AGPAT4-IT1Q9H0P7 198 aa14.02□□□□□ -0.16
HERPUD2-202ENST00000396081 SCGB2A1O75556 95 aa14.02□□□□□ -0.17
HERPUD2-202ENST00000396081 PTH2Q96A98 100 aa14.02□□□□□ -0.17
HERPUD2-202ENST00000396081 GEMIN7Q9H840 131 aaKnown RBP14.02□□□□□ -0.17
HERPUD2-202ENST00000396081 TGFAP01135 160 aa14.01□□□□□ -0.17
HERPUD2-202ENST00000396081 HLA-DRB4P13762 266 aa14.01□□□□□ -0.17
HERPUD2-202ENST00000396081 DEFB104AQ8WTQ1 72 aa14.01□□□□□ -0.17
HERPUD2-202ENST00000396081 COLQQ9Y215 455 aaPredicted RBP14.01□□□□□ -0.17
HERPUD2-202ENST00000396081 HLA-DRB4X5D2U9 266 aa14.01□□□□□ -0.17
HERPUD2-202ENST00000396081 TMEM78Q5T7P6 136 aa14.01□□□□□ -0.17
HERPUD2-202ENST00000396081 MORN3Q6PF18 240 aaPredicted RBP14.01□□□□□ -0.17
HERPUD2-202ENST00000396081 SPINK8P0C7L1 97 aa14.01□□□□□ -0.17
HERPUD2-202ENST00000396081 FOXI1Q12951 378 aa14.01□□□□□ -0.17
HERPUD2-202ENST00000396081 GLMPQ8WWB7 406 aa14.01□□□□□ -0.17
HERPUD2-202ENST00000396081 ZNF815PA8K554 130 aa14□□□□□ -0.17
HERPUD2-202ENST00000396081 MRAP2Q96G30 205 aa14□□□□□ -0.17
HERPUD2-202ENST00000396081 M0R381 172 aa14□□□□□ -0.17
HERPUD2-202ENST00000396081 LRBAP50851 2863 aa14□□□□□ -0.17
HERPUD2-202ENST00000396081 SRSF2Q01130 221 aaKnown RBP13.99□□□□□ -0.17
HERPUD2-202ENST00000396081 LGALS1P09382 135 aaKnown RBP13.99□□□□□ -0.17
HERPUD2-202ENST00000396081 ECSCRQ19T08 205 aa13.99□□□□□ -0.17
HERPUD2-202ENST00000396081 ZFP2Q6ZN57 461 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 141.8 ms