RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 ZNF705DP0CH99 300 aaPredicted RBP10.17□□□□□ -0.78
VAPB-202ENST00000395802 ZNF705BP0CI00 300 aaPredicted RBP10.17□□□□□ -0.78
VAPB-202ENST00000395802 PRB4P10163 310 aaPredicted RBP10.17□□□□□ -0.78
VAPB-202ENST00000395802 NUTF2P61970 127 aaKnown RBP10.17□□□□□ -0.78
VAPB-202ENST00000395802 FAM162BQ5T6X4 162 aa10.17□□□□□ -0.78
VAPB-202ENST00000395802 PRR27Q6MZM9 219 aa10.17□□□□□ -0.78
VAPB-202ENST00000395802 STHQ8IWL8 128 aa10.17□□□□□ -0.78
VAPB-202ENST00000395802 IMMP2LQ96T52 175 aa10.17□□□□□ -0.78
VAPB-202ENST00000395802 MDFIQ99750 246 aa10.17□□□□□ -0.78
VAPB-202ENST00000395802 RNASE7Q9H1E1 156 aaKnown RBP10.17□□□□□ -0.78
VAPB-202ENST00000395802 VWFP04275 2813 aa10.17□□□□□ -0.78
VAPB-202ENST00000395802 H3BMM0 161 aa10.17□□□□□ -0.78
VAPB-202ENST00000395802 GPX1P07203 203 aa10.17□□□□□ -0.78
VAPB-202ENST00000395802 CRISP2P16562 243 aa10.17□□□□□ -0.78
VAPB-202ENST00000395802 PYGO2Q9BRQ0 406 aa10.17□□□□□ -0.78
VAPB-202ENST00000395802 NOTCH3Q9UM47 2321 aa10.16□□□□□ -0.78
VAPB-202ENST00000395802 ANK2Q01484 3957 aa10.16□□□□□ -0.78
VAPB-202ENST00000395802 FABP5P3A8MUU1 101 aa10.16□□□□□ -0.78
VAPB-202ENST00000395802 P01737 135 aa10.16□□□□□ -0.78
VAPB-202ENST00000395802 S100PP25815 95 aa10.16□□□□□ -0.78
VAPB-202ENST00000395802 CDKN1BP46527 198 aa10.16□□□□□ -0.78
VAPB-202ENST00000395802 GDF5OSQ5U4N7 250 aa10.16□□□□□ -0.78
VAPB-202ENST00000395802 ZC2HC1AQ96GY0 325 aa10.16□□□□□ -0.78
VAPB-202ENST00000395802 FAM19A4Q96LR4 140 aa10.16□□□□□ -0.78
VAPB-202ENST00000395802 SORL1Q92673 2214 aa10.15□□□□□ -0.78
VAPB-202ENST00000395802 KCNIP4Q6PIL6 250 aa10.15□□□□□ -0.78
VAPB-202ENST00000395802 APRG1Q8IVJ8 170 aa10.15□□□□□ -0.78
VAPB-202ENST00000395802 C8orf49Q96NF6 230 aa10.15□□□□□ -0.78
VAPB-202ENST00000395802 A0A1W2PPQ1 181 aa10.14□□□□□ -0.79
VAPB-202ENST00000395802 XKRY2A2RUG3 117 aa10.14□□□□□ -0.79
VAPB-202ENST00000395802 ZNF705GA8MUZ8 300 aaPredicted RBP10.14□□□□□ -0.79
VAPB-202ENST00000395802 CD7P09564 240 aa10.14□□□□□ -0.79
VAPB-202ENST00000395802 FAM3BP58499 235 aaPredicted RBP10.14□□□□□ -0.79
VAPB-202ENST00000395802 DEFB1P60022 68 aa10.14□□□□□ -0.79
VAPB-202ENST00000395802 LINC00322Q6ZN03 302 aaPredicted RBP10.14□□□□□ -0.79
VAPB-202ENST00000395802 FAM210BQ96KR6 192 aa10.14□□□□□ -0.79
VAPB-202ENST00000395802 IL36BQ9NZH7 164 aa10.14□□□□□ -0.79
VAPB-202ENST00000395802 TRAV21A0A0B4J279 112 aa10.14□□□□□ -0.79
VAPB-202ENST00000395802 KNCNA6PVL3 124 aa10.14□□□□□ -0.79
VAPB-202ENST00000395802 A8MTW9 85 aa10.14□□□□□ -0.79
VAPB-202ENST00000395802 AMBPP02760 352 aa10.14□□□□□ -0.79
VAPB-202ENST00000395802 KRTAP21-3Q3LHN1 58 aa10.14□□□□□ -0.79
VAPB-202ENST00000395802 CT83Q5H943 113 aa10.14□□□□□ -0.79
VAPB-202ENST00000395802 NUDT10Q8NFP7 164 aa10.14□□□□□ -0.79
VAPB-202ENST00000395802 SPATA3Q8NHX4 192 aa10.14□□□□□ -0.79
VAPB-202ENST00000395802 NUDT11Q96G61 164 aa10.14□□□□□ -0.79
VAPB-202ENST00000395802 LOC105371267A0A1B0GV96 52 aa10.13□□□□□ -0.79
VAPB-202ENST00000395802 C19orf71A6NCJ1 209 aa10.13□□□□□ -0.79
VAPB-202ENST00000395802 KLLNB2CW77 178 aa10.13□□□□□ -0.79
VAPB-202ENST00000395802 GATCO43716 136 aaKnown RBP10.13□□□□□ -0.79
VAPB-202ENST00000395802 IGKV3-20P01619 116 aa10.12□□□□□ -0.79
VAPB-202ENST00000395802 RPS10P46783 165 aaKnown RBP10.12□□□□□ -0.79
VAPB-202ENST00000395802 ZFAND2AQ8N6M9 145 aa10.12□□□□□ -0.79
VAPB-202ENST00000395802 RPP21Q9H633 154 aaKnown RBP10.12□□□□□ -0.79
VAPB-202ENST00000395802 A8MWL6 223 aa10.12□□□□□ -0.79
VAPB-202ENST00000395802 TYMSP04818 313 aa10.12□□□□□ -0.79
VAPB-202ENST00000395802 RPS20P60866 119 aaKnown RBP10.12□□□□□ -0.79
VAPB-202ENST00000395802 RPL19P84098 196 aaKnown RBP10.12□□□□□ -0.79
VAPB-202ENST00000395802 Q6AWC8 147 aa10.12□□□□□ -0.79
VAPB-202ENST00000395802 BTF3L4Q96K17 158 aa10.12□□□□□ -0.79
VAPB-202ENST00000395802 C19orf73Q9NVV2 129 aa10.12□□□□□ -0.79
VAPB-202ENST00000395802 TRAV9-1A0A075B6T8 112 aa10.11□□□□□ -0.79
VAPB-202ENST00000395802 SH2D1AO60880 128 aa10.11□□□□□ -0.79
VAPB-202ENST00000395802 CA1P00915 261 aaPredicted RBP10.11□□□□□ -0.79
VAPB-202ENST00000395802 RNASE4P34096 147 aaKnown RBP10.11□□□□□ -0.79
VAPB-202ENST00000395802 EGFEM1PQ0D2K5 195 aa10.11□□□□□ -0.79
VAPB-202ENST00000395802 MORN3Q6PF18 240 aaPredicted RBP10.11□□□□□ -0.79
VAPB-202ENST00000395802 AMTNQ6UX39 209 aa10.11□□□□□ -0.79
VAPB-202ENST00000395802 TRPT1Q86TN4 253 aaKnown RBP10.11□□□□□ -0.79
VAPB-202ENST00000395802 C1QTNF4Q9BXJ3 329 aa10.11□□□□□ -0.79
VAPB-202ENST00000395802 SMIM27A0A1W2PRY6 76 aa10.1□□□□□ -0.79
VAPB-202ENST00000395802 C7orf71A4D174 169 aa10.1□□□□□ -0.79
VAPB-202ENST00000395802 FAM231BA6NCW3 169 aa10.1□□□□□ -0.79
VAPB-202ENST00000395802 CRIP1P50238 77 aa10.1□□□□□ -0.79
VAPB-202ENST00000395802 ZNF124Q15973 351 aa10.1□□□□□ -0.79
VAPB-202ENST00000395802 SPINK13Q1W4C9 94 aa10.1□□□□□ -0.79
VAPB-202ENST00000395802 OXLD1Q5BKU9 147 aa10.1□□□□□ -0.79
VAPB-202ENST00000395802 C20orf144Q9BQM9 153 aa10.1□□□□□ -0.79
VAPB-202ENST00000395802 GFRA4Q9GZZ7 299 aa10.1□□□□□ -0.79
VAPB-202ENST00000395802 SRD5A3Q9H8P0 318 aa10.1□□□□□ -0.79
VAPB-202ENST00000395802 TMEM189A5PLL7 270 aa10.1□□□□□ -0.79
VAPB-202ENST00000395802 C1orf196B1AJZ1 125 aa10.1□□□□□ -0.79
VAPB-202ENST00000395802 ORM1P02763 201 aa10.1□□□□□ -0.79
VAPB-202ENST00000395802 OR2D3Q8NGH3 330 aa10.1□□□□□ -0.79
VAPB-202ENST00000395802 TSKUQ8WUA8 353 aa10.1□□□□□ -0.79
VAPB-202ENST00000395802 KCNS1Q96KK3 526 aa10.1□□□□□ -0.79
VAPB-202ENST00000395802 J3KRW8 73 aa10.09□□□□□ -0.79
VAPB-202ENST00000395802 ZNF80P51504 273 aaPredicted RBP10.09□□□□□ -0.79
VAPB-202ENST00000395802 LINC01559Q495D7 138 aa10.09□□□□□ -0.79
VAPB-202ENST00000395802 M0R2Z0 102 aa10.08□□□□□ -0.8
VAPB-202ENST00000395802 INSP01308 110 aa10.08□□□□□ -0.8
VAPB-202ENST00000395802 RAB5BP61020 215 aa10.08□□□□□ -0.8
VAPB-202ENST00000395802 FAM159AQ6UWV7 190 aa10.08□□□□□ -0.8
VAPB-202ENST00000395802 ZFP82Q8N141 532 aa10.08□□□□□ -0.8
VAPB-202ENST00000395802 NAT8BQ9UHF3 227 aa10.08□□□□□ -0.8
VAPB-202ENST00000395802 PHOX2AO14813 284 aa10.07□□□□□ -0.8
VAPB-202ENST00000395802 TRGC2P03986 189 aa10.07□□□□□ -0.8
VAPB-202ENST00000395802 TCL1AP56279 114 aa10.07□□□□□ -0.8
VAPB-202ENST00000395802 GFI1BQ5VTD9 330 aa10.07□□□□□ -0.8
VAPB-202ENST00000395802 DEFB125Q8N687 156 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms