RNA–Protein interactions for RNA: ENST00000395756.5

SREBF1-204, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 3,026 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-204ENST00000395756 PRR25Q96S07 402 aa13.77□□□□□ -0.2
SREBF1-204ENST00000395756 NPIPB6E9PJ23 425 aa13.77□□□□□ -0.21
SREBF1-204ENST00000395756 PPIFP30405 207 aaKnown RBP13.77□□□□□ -0.21
SREBF1-204ENST00000395756 DEFB1P60022 68 aa13.77□□□□□ -0.21
SREBF1-204ENST00000395756 DEFB112Q30KQ8 113 aa13.77□□□□□ -0.21
SREBF1-204ENST00000395756 MPV17L2Q567V2 206 aa13.77□□□□□ -0.21
SREBF1-204ENST00000395756 Q8N976 141 aa13.77□□□□□ -0.21
SREBF1-204ENST00000395756 TMEM189A5PLL7 270 aa13.77□□□□□ -0.21
SREBF1-204ENST00000395756 ZNF324O75467 553 aaPredicted RBP13.77□□□□□ -0.21
SREBF1-204ENST00000395756 ORM1P02763 201 aa13.77□□□□□ -0.21
SREBF1-204ENST00000395756 TAX1BP3O14907 124 aa13.76□□□□□ -0.21
SREBF1-204ENST00000395756 CT83Q5H943 113 aa13.76□□□□□ -0.21
SREBF1-204ENST00000395756 C10orf99Q6UWK7 81 aa13.76□□□□□ -0.21
SREBF1-204ENST00000395756 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.76□□□□□ -0.21
SREBF1-204ENST00000395756 ATP5L2Q7Z4Y8 100 aa13.76□□□□□ -0.21
SREBF1-204ENST00000395756 KLHDC1Q8N7A1 406 aa13.76□□□□□ -0.21
SREBF1-204ENST00000395756 A0A1B0GUT8 65 aa13.76□□□□□ -0.21
SREBF1-204ENST00000395756 RASL11AQ6T310 242 aa13.76□□□□□ -0.21
SREBF1-204ENST00000395756 FER1L6-AS1Q8NA97 138 aa13.76□□□□□ -0.21
SREBF1-204ENST00000395756 DUX5Q96PT3 197 aa13.76□□□□□ -0.21
SREBF1-204ENST00000395756 A6NDX4 124 aa13.75□□□□□ -0.21
SREBF1-204ENST00000395756 SRD5A1P18405 259 aa13.75□□□□□ -0.21
SREBF1-204ENST00000395756 RAB9AP51151 201 aa13.75□□□□□ -0.21
SREBF1-204ENST00000395756 LYZL1Q6UWQ5 148 aa13.75□□□□□ -0.21
SREBF1-204ENST00000395756 MRPS16Q9Y3D3 137 aaKnown RBP13.75□□□□□ -0.21
SREBF1-204ENST00000395756 PRRC2AP48634 2157 aaKnown RBP13.75□□□□□ -0.21
SREBF1-204ENST00000395756 TMEM213A2RRL7 107 aa13.75□□□□□ -0.21
SREBF1-204ENST00000395756 M0R2Z0 102 aa13.74□□□□□ -0.21
SREBF1-204ENST00000395756 FAM162BQ5T6X4 162 aa13.74□□□□□ -0.21
SREBF1-204ENST00000395756 SMAD7O15105 426 aaKnown RBP13.74□□□□□ -0.21
SREBF1-204ENST00000395756 ESDP10768 282 aa13.74□□□□□ -0.21
SREBF1-204ENST00000395756 AZU1P20160 251 aa13.74□□□□□ -0.21
SREBF1-204ENST00000395756 HIST2H2BCQ6DN03 193 aa13.74□□□□□ -0.21
SREBF1-204ENST00000395756 IL17RELQ6ZVW7 336 aa13.74□□□□□ -0.21
SREBF1-204ENST00000395756 SETD2Q9BYW2 2564 aaPredicted RBP13.74□□□□□ -0.21
SREBF1-204ENST00000395756 G3V4G9 280 aa13.74□□□□□ -0.21
SREBF1-204ENST00000395756 Q6ZQT7 251 aa13.74□□□□□ -0.21
SREBF1-204ENST00000395756 GFRA4Q9GZZ7 299 aa13.74□□□□□ -0.21
SREBF1-204ENST00000395756 C8orf86Q6ZUL3 223 aa13.73□□□□□ -0.21
SREBF1-204ENST00000395756 OR4X2Q8NGF9 303 aa13.73□□□□□ -0.21
SREBF1-204ENST00000395756 BORCS7Q96B45 105 aa13.73□□□□□ -0.21
SREBF1-204ENST00000395756 C16orf92Q96LL3 132 aa13.73□□□□□ -0.21
SREBF1-204ENST00000395756 APCP25054 2843 aa13.73□□□□□ -0.21
SREBF1-204ENST00000395756 IGHG2P01859 326 aa13.73□□□□□ -0.21
SREBF1-204ENST00000395756 LINC01356Q8N9X3 169 aa13.73□□□□□ -0.21
SREBF1-204ENST00000395756 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.72□□□□□ -0.21
SREBF1-204ENST00000395756 TRAV8-6A0A0B4J262 113 aa13.72□□□□□ -0.21
SREBF1-204ENST00000395756 H0Y8G0 127 aa13.72□□□□□ -0.21
SREBF1-204ENST00000395756 NUDT3O95989 172 aa13.72□□□□□ -0.21
SREBF1-204ENST00000395756 EDN2P20800 178 aa13.72□□□□□ -0.21
SREBF1-204ENST00000395756 ATP6V0BQ99437 205 aa13.72□□□□□ -0.21
SREBF1-204ENST00000395756 C3orf79P0CE67 100 aa13.72□□□□□ -0.21
SREBF1-204ENST00000395756 FAM223BA6NKX1 122 aa13.71□□□□□ -0.21
SREBF1-204ENST00000395756 RPS20P60866 119 aaKnown RBP13.71□□□□□ -0.21
SREBF1-204ENST00000395756 TM4SF20Q53R12 229 aa13.71□□□□□ -0.21
SREBF1-204ENST00000395756 FAM223AQ8IWN6 122 aa13.71□□□□□ -0.21
SREBF1-204ENST00000395756 LOC389332A0A1B0GUA5 103 aa13.71□□□□□ -0.22
SREBF1-204ENST00000395756 IGF1P05019 195 aa13.71□□□□□ -0.22
SREBF1-204ENST00000395756 RIGQ13278 110 aa13.71□□□□□ -0.22
SREBF1-204ENST00000395756 URB1-AS1Q96HZ7 61 aa13.71□□□□□ -0.22
SREBF1-204ENST00000395756 AGPAT4-IT1Q9H0P7 198 aa13.71□□□□□ -0.22
SREBF1-204ENST00000395756 TRAV8-2A0A0B4J237 113 aa13.7□□□□□ -0.22
SREBF1-204ENST00000395756 TRBV6-1A0A0K0K1D8 114 aa13.7□□□□□ -0.22
SREBF1-204ENST00000395756 HAX1O00165 279 aa13.7□□□□□ -0.22
SREBF1-204ENST00000395756 C19orf54Q5BKX5 351 aa13.7□□□□□ -0.22
SREBF1-204ENST00000395756 SHISA2Q6UWI4 295 aa13.7□□□□□ -0.22
SREBF1-204ENST00000395756 NDFIP1Q9BT67 221 aa13.7□□□□□ -0.22
SREBF1-204ENST00000395756 TWIST1Q15672 202 aa13.7□□□□□ -0.22
SREBF1-204ENST00000395756 MSRB1Q9NZV6 116 aa13.7□□□□□ -0.22
SREBF1-204ENST00000395756 SLC25A16P16260 332 aa13.69□□□□□ -0.22
SREBF1-204ENST00000395756 AMN1Q8IY45 258 aa13.69□□□□□ -0.22
SREBF1-204ENST00000395756 GLMPQ8WWB7 406 aa13.69□□□□□ -0.22
SREBF1-204ENST00000395756 MCRIP2Q9BUT9 160 aaKnown RBP13.69□□□□□ -0.22
SREBF1-204ENST00000395756 FAM231BA6NCW3 169 aa13.69□□□□□ -0.22
SREBF1-204ENST00000395756 DSCR9P59020 149 aa13.69□□□□□ -0.22
SREBF1-204ENST00000395756 SORL1Q92673 2214 aa13.69□□□□□ -0.22
SREBF1-204ENST00000395756 GAGE10A6NGK3 116 aa13.69□□□□□ -0.22
SREBF1-204ENST00000395756 CKS1BP61024 79 aa13.69□□□□□ -0.22
SREBF1-204ENST00000395756 WFDC3Q8IUB2 231 aa13.69□□□□□ -0.22
SREBF1-204ENST00000395756 BEX4Q9NWD9 120 aaPredicted RBP13.69□□□□□ -0.22
SREBF1-204ENST00000395756 ACANP16112 2415 aa13.68□□□□□ -0.22
SREBF1-204ENST00000395756 LINC00173Q6ZV60 143 aa13.68□□□□□ -0.22
SREBF1-204ENST00000395756 SMKR1H3BMG3 65 aa13.68□□□□□ -0.22
SREBF1-204ENST00000395756 FXYD7P58549 80 aa13.68□□□□□ -0.22
SREBF1-204ENST00000395756 F6UB75 175 aa13.67□□□□□ -0.22
SREBF1-204ENST00000395756 TMEM78Q5T7P6 136 aa13.67□□□□□ -0.22
SREBF1-204ENST00000395756 EBLN2Q6P2I7 272 aa13.67□□□□□ -0.22
SREBF1-204ENST00000395756 SPRY2O43597 315 aa13.67□□□□□ -0.22
SREBF1-204ENST00000395756 KLF5Q13887 457 aaPredicted RBP13.67□□□□□ -0.22
SREBF1-204ENST00000395756 HIST2H2BDQ6DRA6 164 aa13.67□□□□□ -0.22
SREBF1-204ENST00000395756 C20orf173Q96LM9 149 aa13.67□□□□□ -0.22
SREBF1-204ENST00000395756 NAA38Q9BRA0 125 aaKnown RBP13.67□□□□□ -0.22
SREBF1-204ENST00000395756 TENM4Q6N022 2769 aa13.67□□□□□ -0.22
SREBF1-204ENST00000395756 NPFFR1Q9GZQ6 430 aa13.66□□□□□ -0.22
SREBF1-204ENST00000395756 FAM181BA6NEQ2 426 aa13.66□□□□□ -0.22
SREBF1-204ENST00000395756 FABP5P3A8MUU1 101 aa13.66□□□□□ -0.22
SREBF1-204ENST00000395756 IGLL1P15814 213 aa13.66□□□□□ -0.22
SREBF1-204ENST00000395756 SLC50A1Q9BRV3 221 aa13.66□□□□□ -0.22
SREBF1-204ENST00000395756 SMPXQ9UHP9 88 aa13.66□□□□□ -0.22
SREBF1-204ENST00000395756 D6R8Y8 96 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms