RNA–Protein interactions for RNA: ENST00000394803.9

UBE2D3-208, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,227 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-208ENST00000394803 CLEC3BP05452 202 aa7.75□□□□□ -1.17
UBE2D3-208ENST00000394803 HLA-DMBP28068 263 aa7.75□□□□□ -1.17
UBE2D3-208ENST00000394803 ERCC8Q13216 396 aa7.75□□□□□ -1.17
UBE2D3-208ENST00000394803 ECSCRQ19T08 205 aa7.75□□□□□ -1.17
UBE2D3-208ENST00000394803 TRBV25-1A0A075B6N4 114 aa7.74□□□□□ -1.17
UBE2D3-208ENST00000394803 TMEM8BA6NDV4 472 aa7.74□□□□□ -1.17
UBE2D3-208ENST00000394803 AGPAT4-IT1Q9H0P7 198 aa7.74□□□□□ -1.17
UBE2D3-208ENST00000394803 SIRPDQ9H106 197 aa7.74□□□□□ -1.17
UBE2D3-208ENST00000394803 PKDREJQ9NTG1 2253 aa7.74□□□□□ -1.17
UBE2D3-208ENST00000394803 RP1L1Q8IWN7 2480 aaPredicted RBP7.74□□□□□ -1.17
UBE2D3-208ENST00000394803 IGKV3D-20A0A0C4DH25 116 aa7.74□□□□□ -1.17
UBE2D3-208ENST00000394803 FAM223BA6NKX1 122 aa7.74□□□□□ -1.17
UBE2D3-208ENST00000394803 H7C1H1 209 aa7.74□□□□□ -1.17
UBE2D3-208ENST00000394803 MED14OSP0DP75 135 aa7.74□□□□□ -1.17
UBE2D3-208ENST00000394803 IGFL4Q6B9Z1 124 aa7.74□□□□□ -1.17
UBE2D3-208ENST00000394803 WFDC3Q8IUB2 231 aa7.74□□□□□ -1.17
UBE2D3-208ENST00000394803 FAM223AQ8IWN6 122 aa7.74□□□□□ -1.17
UBE2D3-208ENST00000394803 LINC00477Q96M19 166 aa7.74□□□□□ -1.17
UBE2D3-208ENST00000394803 C20orf78Q9BR46 151 aa7.74□□□□□ -1.17
UBE2D3-208ENST00000394803 UFC1Q9Y3C8 167 aa7.74□□□□□ -1.17
UBE2D3-208ENST00000394803 F8W1H4 67 aa7.73□□□□□ -1.17
UBE2D3-208ENST00000394803 ATP5G2Q06055 141 aa7.73□□□□□ -1.17
UBE2D3-208ENST00000394803 FOXE3Q13461 319 aa7.73□□□□□ -1.17
UBE2D3-208ENST00000394803 C8orf86Q6ZUL3 223 aa7.73□□□□□ -1.17
UBE2D3-208ENST00000394803 ZNF575Q86XF7 245 aa7.73□□□□□ -1.17
UBE2D3-208ENST00000394803 NRACQ8N912 160 aa7.73□□□□□ -1.17
UBE2D3-208ENST00000394803 TMEM160Q9NX00 188 aa7.73□□□□□ -1.17
UBE2D3-208ENST00000394803 SPENQ96T58 3664 aaKnown RBP7.73□□□□□ -1.17
UBE2D3-208ENST00000394803 IGHV7-4-1A0A0J9YVY3 117 aa7.72□□□□□ -1.17
UBE2D3-208ENST00000394803 PRAC2D3DTV9 90 aa7.72□□□□□ -1.17
UBE2D3-208ENST00000394803 OVOL1O14753 267 aa7.72□□□□□ -1.17
UBE2D3-208ENST00000394803 ATP6V0E1O15342 81 aa7.72□□□□□ -1.17
UBE2D3-208ENST00000394803 PRB4P10163 310 aaPredicted RBP7.72□□□□□ -1.17
UBE2D3-208ENST00000394803 UCNP55089 124 aa7.72□□□□□ -1.17
UBE2D3-208ENST00000394803 TCTAP57738 103 aa7.72□□□□□ -1.17
UBE2D3-208ENST00000394803 CLEC19AQ6UXS0 136 aa7.72□□□□□ -1.17
UBE2D3-208ENST00000394803 GTSCR1Q86UQ5 136 aa7.72□□□□□ -1.17
UBE2D3-208ENST00000394803 C16orf92Q96LL3 132 aa7.72□□□□□ -1.17
UBE2D3-208ENST00000394803 U3KQE9 123 aa7.72□□□□□ -1.17
UBE2D3-208ENST00000394803 TRAV21A0A0B4J279 112 aa7.72□□□□□ -1.17
UBE2D3-208ENST00000394803 CLPSL1A2RUU4 121 aa7.72□□□□□ -1.17
UBE2D3-208ENST00000394803 F8VRH5 84 aa7.72□□□□□ -1.17
UBE2D3-208ENST00000394803 M0R381 172 aa7.72□□□□□ -1.17
UBE2D3-208ENST00000394803 FXYD2P54710 66 aa7.72□□□□□ -1.17
UBE2D3-208ENST00000394803 RNF182Q8N6D2 247 aa7.72□□□□□ -1.17
UBE2D3-208ENST00000394803 SMIM2Q9BVW6 85 aa7.72□□□□□ -1.17
UBE2D3-208ENST00000394803 MRPL35Q9NZE8 188 aaKnown RBP7.72□□□□□ -1.17
UBE2D3-208ENST00000394803 ROS1P08922 2347 aa7.72□□□□□ -1.17
UBE2D3-208ENST00000394803 IGKV2D-26A0A0A0MRZ7 120 aa7.71□□□□□ -1.17
UBE2D3-208ENST00000394803 TRAV40A0A0B4J280 105 aa7.71□□□□□ -1.17
UBE2D3-208ENST00000394803 OR11H12B2RN74 326 aa7.71□□□□□ -1.17
UBE2D3-208ENST00000394803 SAP30O75446 220 aa7.71□□□□□ -1.17
UBE2D3-208ENST00000394803 OR11H1Q8NG94 326 aa7.71□□□□□ -1.17
UBE2D3-208ENST00000394803 OR10J6PQ8NGY7 276 aa7.71□□□□□ -1.17
UBE2D3-208ENST00000394803 OR11H2Q8NH07 326 aa7.71□□□□□ -1.17
UBE2D3-208ENST00000394803 CCDC140Q96MF4 163 aa7.71□□□□□ -1.17
UBE2D3-208ENST00000394803 DPH3P1Q9H4G8 78 aa7.71□□□□□ -1.17
UBE2D3-208ENST00000394803 NHP2Q9NX24 153 aaKnown RBP7.71□□□□□ -1.17
UBE2D3-208ENST00000394803 ABCA1O95477 2261 aa7.71□□□□□ -1.18
UBE2D3-208ENST00000394803 TRAV8-2A0A0B4J237 113 aa7.71□□□□□ -1.18
UBE2D3-208ENST00000394803 TRBV7-9A0A0J9YWB2 115 aa7.71□□□□□ -1.18
UBE2D3-208ENST00000394803 TMEM238LA0A1B0GVL6 79 aa7.71□□□□□ -1.18
UBE2D3-208ENST00000394803 A6NJY4 79 aa7.71□□□□□ -1.18
UBE2D3-208ENST00000394803 E9PLD3 99 aa7.71□□□□□ -1.18
UBE2D3-208ENST00000394803 PPIFP30405 207 aaKnown RBP7.71□□□□□ -1.18
UBE2D3-208ENST00000394803 KLRB1Q12918 225 aa7.71□□□□□ -1.18
UBE2D3-208ENST00000394803 HIST1H4GQ99525 98 aa7.71□□□□□ -1.18
UBE2D3-208ENST00000394803 MGAQ8IWI9 3026 aa7.7□□□□□ -1.18
UBE2D3-208ENST00000394803 BOD1L1Q8NFC6 3051 aa7.7□□□□□ -1.18
UBE2D3-208ENST00000394803 NCOR2Q9Y618 2525 aa7.7□□□□□ -1.18
UBE2D3-208ENST00000394803 CENPVL3A0A0U1RRI6 287 aa7.7□□□□□ -1.18
UBE2D3-208ENST00000394803 LY6HO94772 140 aa7.7□□□□□ -1.18
UBE2D3-208ENST00000394803 TRGV3P03979 118 aa7.7□□□□□ -1.18
UBE2D3-208ENST00000394803 SCGB1A1P11684 91 aa7.7□□□□□ -1.18
UBE2D3-208ENST00000394803 ASIPP42127 132 aa7.7□□□□□ -1.18
UBE2D3-208ENST00000394803 PAPPA-AS1Q5QFB9 102 aa7.7□□□□□ -1.18
UBE2D3-208ENST00000394803 CHTOPQ9Y3Y2 248 aaKnown RBP7.7□□□□□ -1.18
UBE2D3-208ENST00000394803 IGHV3-35A0A0C4DH35 117 aa7.7□□□□□ -1.18
UBE2D3-208ENST00000394803 GATA1P15976 413 aaPredicted RBP7.7□□□□□ -1.18
UBE2D3-208ENST00000394803 S100A4P26447 101 aaKnown RBP7.7□□□□□ -1.18
UBE2D3-208ENST00000394803 GRNP28799 593 aaKnown RBP7.7□□□□□ -1.18
UBE2D3-208ENST00000394803 CRIP2P52943 208 aaPredicted RBP7.7□□□□□ -1.18
UBE2D3-208ENST00000394803 TM4SF20Q53R12 229 aa7.7□□□□□ -1.18
UBE2D3-208ENST00000394803 FOXI2Q6ZQN5 318 aa7.7□□□□□ -1.18
UBE2D3-208ENST00000394803 PHLDA1Q8WV24 401 aaPredicted RBP7.7□□□□□ -1.18
UBE2D3-208ENST00000394803 TOMM6Q96B49 74 aa7.7□□□□□ -1.18
UBE2D3-208ENST00000394803 ZNF479Q96JC4 524 aa7.7□□□□□ -1.18
UBE2D3-208ENST00000394803 SCGB3A1Q96QR1 104 aa7.7□□□□□ -1.18
UBE2D3-208ENST00000394803 NAA38Q9BRA0 125 aaKnown RBP7.7□□□□□ -1.18
UBE2D3-208ENST00000394803 C11orf21Q9P2W6 132 aa7.7□□□□□ -1.18
UBE2D3-208ENST00000394803 ZZEF1O43149 2961 aa7.69□□□□□ -1.18
UBE2D3-208ENST00000394803 IGHV3OR16-8A0A075B7F1 116 aa7.69□□□□□ -1.18
UBE2D3-208ENST00000394803 MYMXA0A1B0GTQ4 84 aa7.69□□□□□ -1.18
UBE2D3-208ENST00000394803 SAA4P35542 130 aa7.69□□□□□ -1.18
UBE2D3-208ENST00000394803 SUMO2P61956 95 aaKnown RBP7.69□□□□□ -1.18
UBE2D3-208ENST00000394803 RPL24P83731 157 aaKnown RBP7.69□□□□□ -1.18
UBE2D3-208ENST00000394803 LYRM7Q5U5X0 104 aa7.69□□□□□ -1.18
UBE2D3-208ENST00000394803 SAMD13Q5VXD3 122 aa7.69□□□□□ -1.18
UBE2D3-208ENST00000394803 MOB4Q9Y3A3 225 aa7.69□□□□□ -1.18
UBE2D3-208ENST00000394803 POLEQ07864 2286 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms