RNA–Protein interactions for RNA: ENST00000394081.7

RARA-202, Transcript of retinoic acid receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene RARA, Length 2,285 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-202ENST00000394081 HLA-DMBP28068 263 aa17.56■□□□□ 0.4
RARA-202ENST00000394081 OR11H6Q8NGC7 330 aa17.56■□□□□ 0.4
RARA-202ENST00000394081 VCX2Q9H322 139 aa17.56■□□□□ 0.4
RARA-202ENST00000394081 INSL3P51460 131 aa17.55■□□□□ 0.4
RARA-202ENST00000394081 PRB3Q04118 309 aaPredicted RBP17.55■□□□□ 0.4
RARA-202ENST00000394081 ORMDL2Q53FV1 153 aa17.55■□□□□ 0.4
RARA-202ENST00000394081 ZNF418Q8TF45 676 aaPredicted RBP17.55■□□□□ 0.4
RARA-202ENST00000394081 CLUHP3Q96NS8 147 aa17.55■□□□□ 0.4
RARA-202ENST00000394081 ZGRF1Q86YA3 2104 aa17.55■□□□□ 0.4
RARA-202ENST00000394081 TRGV3P03979 118 aa17.55■□□□□ 0.4
RARA-202ENST00000394081 A0A0G2JNJ9 132 aa17.54■□□□□ 0.4
RARA-202ENST00000394081 ERCC8Q13216 396 aa17.54■□□□□ 0.4
RARA-202ENST00000394081 LYRM7Q5U5X0 104 aa17.54■□□□□ 0.4
RARA-202ENST00000394081 C8orf86Q6ZUL3 223 aa17.54■□□□□ 0.4
RARA-202ENST00000394081 Q9UFV3 132 aa17.54■□□□□ 0.4
RARA-202ENST00000394081 PIEZO1Q92508 2521 aa17.54■□□□□ 0.4
RARA-202ENST00000394081 IGHV7-4-1A0A0J9YVY3 117 aa17.54■□□□□ 0.4
RARA-202ENST00000394081 ATP5G2Q06055 141 aa17.54■□□□□ 0.4
RARA-202ENST00000394081 SMIM2Q9BVW6 85 aa17.54■□□□□ 0.4
RARA-202ENST00000394081 HIF1ANQ9NWT6 349 aa17.54■□□□□ 0.4
RARA-202ENST00000394081 PPIFP30405 207 aaKnown RBP17.53■□□□□ 0.4
RARA-202ENST00000394081 IGFL4Q6B9Z1 124 aa17.53■□□□□ 0.4
RARA-202ENST00000394081 MRPL53Q96EL3 112 aaKnown RBP17.53■□□□□ 0.4
RARA-202ENST00000394081 PGPEP1Q9NXJ5 209 aa17.53■□□□□ 0.4
RARA-202ENST00000394081 E7EQL1 145 aa17.52■□□□□ 0.4
RARA-202ENST00000394081 IGF2-ASQ6U949 168 aa17.52■□□□□ 0.4
RARA-202ENST00000394081 LY6G5BQ8NDX9 201 aa17.52■□□□□ 0.4
RARA-202ENST00000394081 TOMM6Q96B49 74 aa17.52■□□□□ 0.4
RARA-202ENST00000394081 CDIP1Q9H305 208 aa17.52■□□□□ 0.4
RARA-202ENST00000394081 SPAARA0A1B0GVQ0 90 aa17.52■□□□□ 0.4
RARA-202ENST00000394081 B9A039 149 aa17.52■□□□□ 0.4
RARA-202ENST00000394081 LGALS1P09382 135 aaKnown RBP17.52■□□□□ 0.4
RARA-202ENST00000394081 NEXN-AS1Q8NBZ9 246 aa17.52■□□□□ 0.4
RARA-202ENST00000394081 C20orf78Q9BR46 151 aa17.52■□□□□ 0.4
RARA-202ENST00000394081 UBE2D1P51668 147 aa17.51■□□□□ 0.39
RARA-202ENST00000394081 EFNA4P52798 201 aa17.51■□□□□ 0.39
RARA-202ENST00000394081 CRYBA4P53673 196 aa17.51■□□□□ 0.39
RARA-202ENST00000394081 GEMIN7Q9H840 131 aaKnown RBP17.51■□□□□ 0.39
RARA-202ENST00000394081 PRAC2D3DTV9 90 aa17.51■□□□□ 0.39
RARA-202ENST00000394081 C11orf21Q9P2W6 132 aa17.51■□□□□ 0.39
RARA-202ENST00000394081 RAXQ9Y2V3 346 aa17.51■□□□□ 0.39
RARA-202ENST00000394081 TMEM78Q5T7P6 136 aa17.5■□□□□ 0.39
RARA-202ENST00000394081 SYT8Q8NBV8 401 aa17.5■□□□□ 0.39
RARA-202ENST00000394081 SMCPP49901 116 aaPredicted RBP17.49■□□□□ 0.39
RARA-202ENST00000394081 SCGB3A1Q96QR1 104 aa17.49■□□□□ 0.39
RARA-202ENST00000394081 ONECUT1Q9UBC0 465 aa17.49■□□□□ 0.39
RARA-202ENST00000394081 UFC1Q9Y3C8 167 aa17.49■□□□□ 0.39
RARA-202ENST00000394081 UBE2D3P61077 147 aa17.49■□□□□ 0.39
RARA-202ENST00000394081 UBE2D2P62837 147 aa17.49■□□□□ 0.39
RARA-202ENST00000394081 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa17.49■□□□□ 0.39
RARA-202ENST00000394081 PIP4P1Q86T03 277 aa17.49■□□□□ 0.39
RARA-202ENST00000394081 AGPAT4-IT1Q9H0P7 198 aa17.49■□□□□ 0.39
RARA-202ENST00000394081 TRAV26-1A0A087WT03 109 aa17.48■□□□□ 0.39
RARA-202ENST00000394081 BUB3O43684 328 aa17.48■□□□□ 0.39
RARA-202ENST00000394081 SPANXN1Q5VSR9 72 aa17.48■□□□□ 0.39
RARA-202ENST00000394081 TRAV26-2A0A0B4J265 109 aa17.47■□□□□ 0.39
RARA-202ENST00000394081 SPINK8P0C7L1 97 aa17.47■□□□□ 0.39
RARA-202ENST00000394081 NDPQ00604 133 aa17.47■□□□□ 0.39
RARA-202ENST00000394081 PPDPFLQ8WWR9 84 aa17.47■□□□□ 0.39
RARA-202ENST00000394081 CENPVL3A0A0U1RRI6 287 aa17.46■□□□□ 0.39
RARA-202ENST00000394081 ODF3BA8MYP8 253 aa17.46■□□□□ 0.39
RARA-202ENST00000394081 KLK9Q2XQG4 91 aa17.46■□□□□ 0.39
RARA-202ENST00000394081 KLK9Q9UKQ9 250 aa17.46■□□□□ 0.39
RARA-202ENST00000394081 HES1Q14469 280 aa17.46■□□□□ 0.39
RARA-202ENST00000394081 C9orf47Q6ZRZ4 202 aa17.46■□□□□ 0.39
RARA-202ENST00000394081 ZFAND3Q9H8U3 227 aa17.46■□□□□ 0.39
RARA-202ENST00000394081 IGHV3-23P01764 117 aa17.45■□□□□ 0.38
RARA-202ENST00000394081 PRADC1Q9BSG0 188 aa17.45■□□□□ 0.38
RARA-202ENST00000394081 SPENQ96T58 3664 aaKnown RBP17.45■□□□□ 0.38
RARA-202ENST00000394081 CACNA1HO95180 2353 aa17.45■□□□□ 0.38
RARA-202ENST00000394081 SUMO2P61956 95 aaKnown RBP17.45■□□□□ 0.38
RARA-202ENST00000394081 Q6ZUT4 128 aa17.45■□□□□ 0.38
RARA-202ENST00000394081 NFE4Q86UQ8 179 aa17.45■□□□□ 0.38
RARA-202ENST00000394081 Q8N6K4 173 aa17.45■□□□□ 0.38
RARA-202ENST00000394081 TRBV20-1A0A075B6N2 111 aa17.44■□□□□ 0.38
RARA-202ENST00000394081 LINC01549A6NIU2 74 aa17.44■□□□□ 0.38
RARA-202ENST00000394081 M0R1W7 72 aa17.44■□□□□ 0.38
RARA-202ENST00000394081 COX6B1P14854 86 aa17.44■□□□□ 0.38
RARA-202ENST00000394081 TEN1Q86WV5 123 aa17.44■□□□□ 0.38
RARA-202ENST00000394081 ZNF815PA8K554 130 aa17.44■□□□□ 0.38
RARA-202ENST00000394081 OOSP1A8MZH6 123 aa17.44■□□□□ 0.38
RARA-202ENST00000394081 TSPAN13O95857 204 aa17.44■□□□□ 0.38
RARA-202ENST00000394081 SBSPONQ8IVN8 264 aa17.44■□□□□ 0.38
RARA-202ENST00000394081 RNF182Q8N6D2 247 aa17.44■□□□□ 0.38
RARA-202ENST00000394081 SH3BGRL2Q9UJC5 107 aa17.44■□□□□ 0.38
RARA-202ENST00000394081 LENEPQ9Y5L5 61 aa17.44■□□□□ 0.38
RARA-202ENST00000394081 M0R381 172 aa17.42■□□□□ 0.38
RARA-202ENST00000394081 CD7P09564 240 aa17.42■□□□□ 0.38
RARA-202ENST00000394081 EBI3Q14213 229 aa17.42■□□□□ 0.38
RARA-202ENST00000394081 BAALCQ8WXS3 180 aa17.42■□□□□ 0.38
RARA-202ENST00000394081 PAPPA-AS1Q5QFB9 102 aa17.41■□□□□ 0.38
RARA-202ENST00000394081 SCGB1D4Q6XE38 83 aa17.41■□□□□ 0.38
RARA-202ENST00000394081 LOC400499M0QZD8 3231 aa17.41■□□□□ 0.38
RARA-202ENST00000394081 ROS1P08922 2347 aa17.41■□□□□ 0.38
RARA-202ENST00000394081 PPP1R17O96001 155 aa17.41■□□□□ 0.38
RARA-202ENST00000394081 PSMB2P49721 201 aa17.41■□□□□ 0.38
RARA-202ENST00000394081 SRSF9Q13242 221 aaKnown RBP eCLIP17.41■□□□□ 0.38
RARA-202ENST00000394081 PRTN3P24158 256 aa17.4■□□□□ 0.38
RARA-202ENST00000394081 LYNX1G3V0Z9 82 aa17.4■□□□□ 0.38
RARA-202ENST00000394081 LYNX1P0DP58 116 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 208 ms