RNA–Protein interactions for RNA: ENST00000389980.7

SPTBN1-203, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-203ENST00000389980 V9GYV3 84 aa9.24□□□□□ -0.93
SPTBN1-203ENST00000389980 NDUFA7O95182 113 aa9.23□□□□□ -0.93
SPTBN1-203ENST00000389980 TCL1AP56279 114 aa9.23□□□□□ -0.93
SPTBN1-203ENST00000389980 RPS20P60866 119 aaKnown RBP9.23□□□□□ -0.93
SPTBN1-203ENST00000389980 PSG3Q16557 428 aa9.23□□□□□ -0.93
SPTBN1-203ENST00000389980 TCF24Q7RTU0 167 aa9.23□□□□□ -0.93
SPTBN1-203ENST00000389980 C20orf173Q96LM9 149 aa9.23□□□□□ -0.93
SPTBN1-203ENST00000389980 VGLL1Q99990 258 aa9.23□□□□□ -0.93
SPTBN1-203ENST00000389980 SLC50A1Q9BRV3 221 aa9.23□□□□□ -0.93
SPTBN1-203ENST00000389980 VAMP8Q9BV40 100 aa9.23□□□□□ -0.93
SPTBN1-203ENST00000389980 IL36BQ9NZH7 164 aa9.23□□□□□ -0.93
SPTBN1-203ENST00000389980 LGALS9O00182 355 aa9.23□□□□□ -0.93
SPTBN1-203ENST00000389980 TMEM75Q8N9X5 138 aa9.23□□□□□ -0.93
SPTBN1-203ENST00000389980 DLX4Q92988 240 aaPredicted RBP9.23□□□□□ -0.93
SPTBN1-203ENST00000389980 RAX2Q96IS3 184 aa9.23□□□□□ -0.93
SPTBN1-203ENST00000389980 PSG8Q9UQ74 426 aa9.23□□□□□ -0.93
SPTBN1-203ENST00000389980 ATRQ13535 2644 aa9.22□□□□□ -0.93
SPTBN1-203ENST00000389980 C2orf70A6NJV1 201 aa9.22□□□□□ -0.93
SPTBN1-203ENST00000389980 K7EQM0 130 aa9.22□□□□□ -0.93
SPTBN1-203ENST00000389980 CA1P00915 261 aaPredicted RBP9.22□□□□□ -0.93
SPTBN1-203ENST00000389980 CBLN1P23435 193 aa9.22□□□□□ -0.93
SPTBN1-203ENST00000389980 PROK1P58294 105 aa9.22□□□□□ -0.93
SPTBN1-203ENST00000389980 DEFB1P60022 68 aa9.22□□□□□ -0.93
SPTBN1-203ENST00000389980 ERCC8Q13216 396 aa9.22□□□□□ -0.93
SPTBN1-203ENST00000389980 ADAMTSL5Q6ZMM2 481 aa9.22□□□□□ -0.93
SPTBN1-203ENST00000389980 LINC00322Q6ZN03 302 aaPredicted RBP9.22□□□□□ -0.93
SPTBN1-203ENST00000389980 WFDC3Q8IUB2 231 aa9.22□□□□□ -0.93
SPTBN1-203ENST00000389980 Q8TAT8 98 aa9.22□□□□□ -0.93
SPTBN1-203ENST00000389980 MLST8Q9BVC4 326 aa9.22□□□□□ -0.93
SPTBN1-203ENST00000389980 NRN1Q9NPD7 142 aa9.22□□□□□ -0.93
SPTBN1-203ENST00000389980 SOCS3O14543 225 aa9.22□□□□□ -0.93
SPTBN1-203ENST00000389980 IBA57Q5T440 356 aaKnown RBP9.22□□□□□ -0.93
SPTBN1-203ENST00000389980 C8orf49Q96NF6 230 aa9.22□□□□□ -0.93
SPTBN1-203ENST00000389980 MAST4O15021 2626 aa9.21□□□□□ -0.93
SPTBN1-203ENST00000389980 TFPI2P48307 235 aa9.21□□□□□ -0.94
SPTBN1-203ENST00000389980 KRTAP10-3P60369 221 aa9.21□□□□□ -0.94
SPTBN1-203ENST00000389980 UQCR10Q9UDW1 63 aa9.21□□□□□ -0.94
SPTBN1-203ENST00000389980 TSSC4Q9Y5U2 329 aaPredicted RBP9.21□□□□□ -0.94
SPTBN1-203ENST00000389980 VWFP04275 2813 aa9.2□□□□□ -0.94
SPTBN1-203ENST00000389980 UBE2V1Q13404 147 aa9.2□□□□□ -0.94
SPTBN1-203ENST00000389980 SMIM15Q7Z3B0 74 aa9.2□□□□□ -0.94
SPTBN1-203ENST00000389980 A0A1B0GUS0 222 aa9.2□□□□□ -0.94
SPTBN1-203ENST00000389980 PPBPP02775 128 aa9.2□□□□□ -0.94
SPTBN1-203ENST00000389980 PTTG1IPP53801 180 aa9.2□□□□□ -0.94
SPTBN1-203ENST00000389980 Q0VG73 95 aa9.2□□□□□ -0.94
SPTBN1-203ENST00000389980 NUDT10Q8NFP7 164 aa9.2□□□□□ -0.94
SPTBN1-203ENST00000389980 OR9G4Q8NGQ1 327 aa9.2□□□□□ -0.94
SPTBN1-203ENST00000389980 NUDT11Q96G61 164 aa9.2□□□□□ -0.94
SPTBN1-203ENST00000389980 ZC2HC1AQ96GY0 325 aa9.2□□□□□ -0.94
SPTBN1-203ENST00000389980 CCL24O00175 119 aa9.19□□□□□ -0.94
SPTBN1-203ENST00000389980 NSUN5P1Q3KNT7 163 aa9.19□□□□□ -0.94
SPTBN1-203ENST00000389980 ZNF738Q8NE65 137 aa9.19□□□□□ -0.94
SPTBN1-203ENST00000389980 OSTCQ9NRP0 149 aa9.19□□□□□ -0.94
SPTBN1-203ENST00000389980 AGRNO00468 2067 aa9.19□□□□□ -0.94
SPTBN1-203ENST00000389980 TRBV6-1A0A0K0K1D8 114 aa9.19□□□□□ -0.94
SPTBN1-203ENST00000389980 DCANP1Q8TF63 244 aa9.19□□□□□ -0.94
SPTBN1-203ENST00000389980 WFDC12Q8WWY7 111 aa9.19□□□□□ -0.94
SPTBN1-203ENST00000389980 MS4A6AQ9H2W1 248 aa9.19□□□□□ -0.94
SPTBN1-203ENST00000389980 SERTM2A0A1B0GWG4 89 aa9.18□□□□□ -0.94
SPTBN1-203ENST00000389980 ADARB2-AS1A8MUL3 147 aa9.18□□□□□ -0.94
SPTBN1-203ENST00000389980 F6UB75 175 aa9.18□□□□□ -0.94
SPTBN1-203ENST00000389980 BMI1P35226 326 aa9.18□□□□□ -0.94
SPTBN1-203ENST00000389980 RPL19P84098 196 aaKnown RBP9.18□□□□□ -0.94
SPTBN1-203ENST00000389980 COX19Q49B96 90 aa9.18□□□□□ -0.94
SPTBN1-203ENST00000389980 Q6ZWC4 215 aa9.18□□□□□ -0.94
SPTBN1-203ENST00000389980 TMEM256Q8N2U0 113 aa9.18□□□□□ -0.94
SPTBN1-203ENST00000389980 SMIM12Q96EX1 92 aa9.18□□□□□ -0.94
SPTBN1-203ENST00000389980 AGPAT4-IT1Q9H0P7 198 aa9.18□□□□□ -0.94
SPTBN1-203ENST00000389980 MRPS16Q9Y3D3 137 aaKnown RBP9.18□□□□□ -0.94
SPTBN1-203ENST00000389980 GRIFINA4D1Z8 144 aa9.17□□□□□ -0.94
SPTBN1-203ENST00000389980 CRIP1P50238 77 aa9.17□□□□□ -0.94
SPTBN1-203ENST00000389980 FHL3Q13643 280 aa9.17□□□□□ -0.94
SPTBN1-203ENST00000389980 MRPL54Q6P161 138 aaKnown RBP9.17□□□□□ -0.94
SPTBN1-203ENST00000389980 PRR25Q96S07 402 aa9.17□□□□□ -0.94
SPTBN1-203ENST00000389980 MRPL18Q9H0U6 180 aaKnown RBP9.17□□□□□ -0.94
SPTBN1-203ENST00000389980 SNURFLB1AK76 121 aa9.17□□□□□ -0.94
SPTBN1-203ENST00000389980 CSN3P07498 182 aa9.17□□□□□ -0.94
SPTBN1-203ENST00000389980 CTRLP40313 264 aa9.17□□□□□ -0.94
SPTBN1-203ENST00000389980 FAM231DQ6ZW35 169 aa9.17□□□□□ -0.94
SPTBN1-203ENST00000389980 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.17□□□□□ -0.94
SPTBN1-203ENST00000389980 RNASE8Q8TDE3 154 aaKnown RBP9.17□□□□□ -0.94
SPTBN1-203ENST00000389980 MRPL53Q96EL3 112 aaKnown RBP9.17□□□□□ -0.94
SPTBN1-203ENST00000389980 PEMTQ9UBM1 199 aa9.17□□□□□ -0.94
SPTBN1-203ENST00000389980 CHTOPQ9Y3Y2 248 aaKnown RBP9.17□□□□□ -0.94
SPTBN1-203ENST00000389980 C19orf71A6NCJ1 209 aa9.16□□□□□ -0.94
SPTBN1-203ENST00000389980 M0QZ24 198 aa9.16□□□□□ -0.94
SPTBN1-203ENST00000389980 LAMTOR2Q9Y2Q5 125 aa9.16□□□□□ -0.94
SPTBN1-203ENST00000389980 CCL25O15444 150 aa9.16□□□□□ -0.94
SPTBN1-203ENST00000389980 ZNF688P0C7X2 276 aa9.16□□□□□ -0.94
SPTBN1-203ENST00000389980 CRISP2P16562 243 aa9.16□□□□□ -0.94
SPTBN1-203ENST00000389980 ZNF80P51504 273 aaPredicted RBP9.16□□□□□ -0.94
SPTBN1-203ENST00000389980 PRR31Q5SQ13 230 aa9.16□□□□□ -0.94
SPTBN1-203ENST00000389980 DAZAP1Q96EP5 407 aaKnown RBP9.16□□□□□ -0.94
SPTBN1-203ENST00000389980 PAM16Q9Y3D7 125 aa9.16□□□□□ -0.94
SPTBN1-203ENST00000389980 SMIM27A0A1W2PRY6 76 aa9.15□□□□□ -0.94
SPTBN1-203ENST00000389980 RBAKDNA6NC62 111 aa9.15□□□□□ -0.94
SPTBN1-203ENST00000389980 NUPR1O60356 82 aa9.15□□□□□ -0.94
SPTBN1-203ENST00000389980 P01737 135 aa9.15□□□□□ -0.94
SPTBN1-203ENST00000389980 BATFQ16520 125 aa9.15□□□□□ -0.94
SPTBN1-203ENST00000389980 KIAA1644Q3SXP7 199 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms