RNA–Protein interactions for RNA: ENST00000384709.1

RNU6-541P-201, Transcript of RNA, U6 small nuclear 541, pseudogene, humanhuman

BASIC

Gene RNU6-541P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-541P-201ENST00000384709 PTPN13Q12923 2485 aa-0.56□□□□□ -2.5
RNU6-541P-201ENST00000384709 C2CD3Q4AC94 2353 aa-0.56□□□□□ -2.5
RNU6-541P-201ENST00000384709 APOA2P02652 100 aa-0.56□□□□□ -2.5
RNU6-541P-201ENST00000384709 FABP4P15090 132 aa-0.56□□□□□ -2.5
RNU6-541P-201ENST00000384709 PHBP35232 272 aa-0.56□□□□□ -2.5
RNU6-541P-201ENST00000384709 MRPS36P82909 103 aaKnown RBP-0.56□□□□□ -2.5
RNU6-541P-201ENST00000384709 KLKP1Q107X0 134 aa-0.56□□□□□ -2.5
RNU6-541P-201ENST00000384709 FADDQ13158 208 aa-0.56□□□□□ -2.5
RNU6-541P-201ENST00000384709 CCSMST1Q4G0I0 132 aa-0.56□□□□□ -2.5
RNU6-541P-201ENST00000384709 AKR1C8PQ5T2L2 129 aa-0.56□□□□□ -2.5
RNU6-541P-201ENST00000384709 CSAG1Q6PB30 78 aa-0.56□□□□□ -2.5
RNU6-541P-201ENST00000384709 DHRS4L2Q6PKH6 230 aa-0.56□□□□□ -2.5
RNU6-541P-201ENST00000384709 ISOC1Q96CN7 298 aa-0.56□□□□□ -2.5
RNU6-541P-201ENST00000384709 BLMP54132 1417 aaPredicted RBP-0.56□□□□□ -2.5
RNU6-541P-201ENST00000384709 MACF1Q9UPN3 7388 aaKnown RBP-0.57□□□□□ -2.5
RNU6-541P-201ENST00000384709 ALMS1Q8TCU4 4167 aa-0.57□□□□□ -2.5
RNU6-541P-201ENST00000384709 VWFP04275 2813 aa-0.57□□□□□ -2.5
RNU6-541P-201ENST00000384709 LOC101927531A0A1B0GV80 90 aa-0.57□□□□□ -2.5
RNU6-541P-201ENST00000384709 A0A1W2PRS3 328 aa-0.57□□□□□ -2.5
RNU6-541P-201ENST00000384709 ATP5HO75947 161 aa-0.57□□□□□ -2.5
RNU6-541P-201ENST00000384709 ATG12O94817 140 aa-0.57□□□□□ -2.5
RNU6-541P-201ENST00000384709 CSN2P05814 226 aa-0.57□□□□□ -2.5
RNU6-541P-201ENST00000384709 HACD4Q5VWC8 232 aa-0.57□□□□□ -2.5
RNU6-541P-201ENST00000384709 TCTEX1D1Q8N7M0 179 aa-0.57□□□□□ -2.5
RNU6-541P-201ENST00000384709 CIB3Q96Q77 187 aaPredicted RBP-0.57□□□□□ -2.5
RNU6-541P-201ENST00000384709 C19orf12Q9NSK7 152 aa-0.57□□□□□ -2.5
RNU6-541P-201ENST00000384709 IL20Q9NYY1 176 aa-0.57□□□□□ -2.5
RNU6-541P-201ENST00000384709 SSR3Q9UNL2 185 aa-0.57□□□□□ -2.5
RNU6-541P-201ENST00000384709 CDK12Q9NYV4 1490 aaPredicted RBP-0.57□□□□□ -2.5
RNU6-541P-201ENST00000384709 SOGA1O94964 1423 aa-0.57□□□□□ -2.5
RNU6-541P-201ENST00000384709 ARFGEF1Q9Y6D6 1849 aa-0.57□□□□□ -2.5
RNU6-541P-201ENST00000384709 SPTBN1Q01082 2364 aaKnown RBP-0.57□□□□□ -2.5
RNU6-541P-201ENST00000384709 A0A1W2PPB8 328 aa-0.58□□□□□ -2.5
RNU6-541P-201ENST00000384709 HIGD1CA8MV81 97 aa-0.58□□□□□ -2.5
RNU6-541P-201ENST00000384709 KIR3DP1A8MWS1 328 aa-0.58□□□□□ -2.5
RNU6-541P-201ENST00000384709 TRACP01848 142 aa-0.58□□□□□ -2.5
RNU6-541P-201ENST00000384709 HSD11B1P28845 292 aa-0.58□□□□□ -2.5
RNU6-541P-201ENST00000384709 CAPZBP47756 277 aa-0.58□□□□□ -2.5
RNU6-541P-201ENST00000384709 SNRPD3P62318 126 aaKnown RBP-0.58□□□□□ -2.5
RNU6-541P-201ENST00000384709 C3orf62Q6ZUJ4 267 aa-0.58□□□□□ -2.5
RNU6-541P-201ENST00000384709 AP1S3Q96PC3 154 aa-0.58□□□□□ -2.5
RNU6-541P-201ENST00000384709 TMEM14BQ9NUH8 114 aa-0.58□□□□□ -2.5
RNU6-541P-201ENST00000384709 LRP5O75197 1615 aa-0.58□□□□□ -2.5
RNU6-541P-201ENST00000384709 CASZ1Q86V15 1759 aa-0.58□□□□□ -2.5
RNU6-541P-201ENST00000384709 CPDO75976 1380 aa-0.58□□□□□ -2.5
RNU6-541P-201ENST00000384709 DLC1Q96QB1 1528 aa-0.59□□□□□ -2.5
RNU6-541P-201ENST00000384709 KPNA4O00629 521 aaPredicted RBP-0.59□□□□□ -2.5
RNU6-541P-201ENST00000384709 POU6F1Q14863 301 aa-0.59□□□□□ -2.5
RNU6-541P-201ENST00000384709 RTL8BQ17RB0 113 aa-0.59□□□□□ -2.5
RNU6-541P-201ENST00000384709 TMEM229BQ8NBD8 167 aa-0.59□□□□□ -2.5
RNU6-541P-201ENST00000384709 OR5AK2Q8NH90 309 aa-0.59□□□□□ -2.5
RNU6-541P-201ENST00000384709 CARD19Q96LW7 228 aa-0.59□□□□□ -2.5
RNU6-541P-201ENST00000384709 GINS3Q9BRX5 216 aa-0.59□□□□□ -2.5
RNU6-541P-201ENST00000384709 LRTM1Q9HBL6 345 aa-0.59□□□□□ -2.5
RNU6-541P-201ENST00000384709 OTORQ9NRC9 128 aa-0.59□□□□□ -2.5
RNU6-541P-201ENST00000384709 TECPR2O15040 1411 aa-0.59□□□□□ -2.5
RNU6-541P-201ENST00000384709 FGD6Q6ZV73 1430 aa-0.59□□□□□ -2.5
RNU6-541P-201ENST00000384709 PLXNB2O15031 1838 aa-0.59□□□□□ -2.5
RNU6-541P-201ENST00000384709 ZCCHC6Q5VYS8 1495 aaKnown RBP-0.6□□□□□ -2.5
RNU6-541P-201ENST00000384709 C3orf85A0A1B0GTC6 90 aa-0.6□□□□□ -2.51
RNU6-541P-201ENST00000384709 MCRIP1C9JLW8 97 aa-0.6□□□□□ -2.51
RNU6-541P-201ENST00000384709 MPC1LP0DKB6 136 aa-0.6□□□□□ -2.51
RNU6-541P-201ENST00000384709 ETV6P41212 452 aa-0.6□□□□□ -2.51
RNU6-541P-201ENST00000384709 NDUFA6P56556 154 aa-0.6□□□□□ -2.51
RNU6-541P-201ENST00000384709 DNAJB13P59910 316 aa-0.6□□□□□ -2.51
RNU6-541P-201ENST00000384709 REEP5Q00765 189 aa-0.6□□□□□ -2.51
RNU6-541P-201ENST00000384709 OR4B1Q8NGF8 309 aa-0.6□□□□□ -2.51
RNU6-541P-201ENST00000384709 MRPL36Q9P0J6 103 aaKnown RBP-0.6□□□□□ -2.51
RNU6-541P-201ENST00000384709 MPC1Q9Y5U8 109 aa-0.6□□□□□ -2.51
RNU6-541P-201ENST00000384709 BSNQ9UPA5 3926 aa-0.6□□□□□ -2.51
RNU6-541P-201ENST00000384709 EIF3AQ14152 1382 aaKnown RBP-0.6□□□□□ -2.51
RNU6-541P-201ENST00000384709 HECTD4Q9Y4D8 3996 aa-0.6□□□□□ -2.51
RNU6-541P-201ENST00000384709 PTPRGP23470 1445 aa-0.61□□□□□ -2.51
RNU6-541P-201ENST00000384709 FAM135BQ49AJ0 1406 aa-0.61□□□□□ -2.51
RNU6-541P-201ENST00000384709 ARL5CA6NH57 179 aa-0.61□□□□□ -2.51
RNU6-541P-201ENST00000384709 TMEM210A6NLX4 147 aa-0.61□□□□□ -2.51
RNU6-541P-201ENST00000384709 H3BQV1 296 aa-0.61□□□□□ -2.51
RNU6-541P-201ENST00000384709 FXYD1O00168 92 aa-0.61□□□□□ -2.51
RNU6-541P-201ENST00000384709 MFSD11O43934 449 aa-0.61□□□□□ -2.51
RNU6-541P-201ENST00000384709 SAA1P0DJI8 122 aaPredicted RBP-0.61□□□□□ -2.51
RNU6-541P-201ENST00000384709 SNCBQ16143 134 aa-0.61□□□□□ -2.51
RNU6-541P-201ENST00000384709 CLEC2BQ92478 149 aa-0.61□□□□□ -2.51
RNU6-541P-201ENST00000384709 DMAC1Q96GE9 116 aa-0.61□□□□□ -2.51
RNU6-541P-201ENST00000384709 PHB2Q99623 299 aa-0.61□□□□□ -2.51
RNU6-541P-201ENST00000384709 PBDC1Q9BVG4 233 aa-0.61□□□□□ -2.51
RNU6-541P-201ENST00000384709 LAMTOR3Q9UHA4 124 aa-0.61□□□□□ -2.51
RNU6-541P-201ENST00000384709 CDK13Q14004 1512 aaKnown RBP-0.61□□□□□ -2.51
RNU6-541P-201ENST00000384709 SIPA1L3O60292 1781 aaPredicted RBP-0.61□□□□□ -2.51
RNU6-541P-201ENST00000384709 FAT2Q9NYQ8 4349 aa-0.62□□□□□ -2.51
RNU6-541P-201ENST00000384709 TMEM30CPA0ZSE6 113 aa-0.62□□□□□ -2.51
RNU6-541P-201ENST00000384709 C10orf142B7Z368 130 aa-0.62□□□□□ -2.51
RNU6-541P-201ENST00000384709 IFNA1P01562 189 aa-0.62□□□□□ -2.51
RNU6-541P-201ENST00000384709 MT-ND6P03923 174 aa-0.62□□□□□ -2.51
RNU6-541P-201ENST00000384709 ARF6P62330 175 aa-0.62□□□□□ -2.51
RNU6-541P-201ENST00000384709 TMED2Q15363 201 aa-0.62□□□□□ -2.51
RNU6-541P-201ENST00000384709 LTC4SQ16873 150 aa-0.62□□□□□ -2.51
RNU6-541P-201ENST00000384709 SREK1IP1Q8N9Q2 155 aaPredicted RBP-0.62□□□□□ -2.51
RNU6-541P-201ENST00000384709 NEK7Q8TDX7 302 aa-0.62□□□□□ -2.51
RNU6-541P-201ENST00000384709 NUBP2Q9Y5Y2 271 aa-0.62□□□□□ -2.51
RNU6-541P-201ENST00000384709 MYH6P13533 1939 aa-0.62□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms