RNA–Protein interactions for RNA: ENST00000380494.9

COL4A3BP-203, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2 BASIC

Gene COL4A3BP, Length 5,651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-203ENST00000380494 NDUFC2O95298 119 aa13.52□□□□□ -0.24
COL4A3BP-203ENST00000380494 RBM3P98179 157 aaKnown RBP13.52□□□□□ -0.24
COL4A3BP-203ENST00000380494 TCTEX1D4Q5JR98 221 aa13.52□□□□□ -0.25
COL4A3BP-203ENST00000380494 ASPHD1Q5U4P2 390 aa13.52□□□□□ -0.25
COL4A3BP-203ENST00000380494 TMEM105Q8N8V8 129 aa13.52□□□□□ -0.25
COL4A3BP-203ENST00000380494 SPINK13Q1W4C9 94 aa13.52□□□□□ -0.25
COL4A3BP-203ENST00000380494 PROK2Q9HC23 129 aa13.52□□□□□ -0.25
COL4A3BP-203ENST00000380494 UBE2E2Q96LR5 201 aa13.52□□□□□ -0.25
COL4A3BP-203ENST00000380494 LOXP28300 417 aaPredicted RBP13.51□□□□□ -0.25
COL4A3BP-203ENST00000380494 ZNF524Q96C55 264 aa13.51□□□□□ -0.25
COL4A3BP-203ENST00000380494 TPSG1Q9NRR2 321 aa13.51□□□□□ -0.25
COL4A3BP-203ENST00000380494 CR1LQ2VPA4 569 aa13.5□□□□□ -0.25
COL4A3BP-203ENST00000380494 CFHR4Q92496 578 aa13.5□□□□□ -0.25
COL4A3BP-203ENST00000380494 E7EQL1 145 aa13.5□□□□□ -0.25
COL4A3BP-203ENST00000380494 BRD3OSQ6XYD6 125 aa13.5□□□□□ -0.25
COL4A3BP-203ENST00000380494 ICOSQ9Y6W8 199 aa13.5□□□□□ -0.25
COL4A3BP-203ENST00000380494 KNCNA6PVL3 124 aa13.5□□□□□ -0.25
COL4A3BP-203ENST00000380494 WISP1O95388 367 aa13.5□□□□□ -0.25
COL4A3BP-203ENST00000380494 DUX4L9Q6RFH8 374 aaPredicted RBP13.5□□□□□ -0.25
COL4A3BP-203ENST00000380494 IGLV1-44P01699 117 aa13.5□□□□□ -0.25
COL4A3BP-203ENST00000380494 RPL35AP18077 110 aaKnown RBP13.5□□□□□ -0.25
COL4A3BP-203ENST00000380494 PLXNA2O75051 1894 aa13.5□□□□□ -0.25
COL4A3BP-203ENST00000380494 CACNA1IQ9P0X4 2223 aa13.5□□□□□ -0.25
COL4A3BP-203ENST00000380494 LINC00173Q6ZV60 143 aa13.5□□□□□ -0.25
COL4A3BP-203ENST00000380494 BRWD3Q6RI45 1802 aa13.49□□□□□ -0.25
COL4A3BP-203ENST00000380494 GP9P14770 177 aa13.49□□□□□ -0.25
COL4A3BP-203ENST00000380494 HOXD3P31249 432 aaPredicted RBP13.49□□□□□ -0.25
COL4A3BP-203ENST00000380494 FXYD2P54710 66 aa13.49□□□□□ -0.25
COL4A3BP-203ENST00000380494 NSUN5P1Q3KNT7 163 aa13.49□□□□□ -0.25
COL4A3BP-203ENST00000380494 KRTAP27-1Q3LI81 207 aa13.49□□□□□ -0.25
COL4A3BP-203ENST00000380494 ZNRF2Q8NHG8 242 aa13.48□□□□□ -0.25
COL4A3BP-203ENST00000380494 ZNF503-AS2A6NEH8 195 aa13.48□□□□□ -0.25
COL4A3BP-203ENST00000380494 WFDC2Q14508 124 aa13.48□□□□□ -0.25
COL4A3BP-203ENST00000380494 LYPD6Q86Y78 171 aa13.48□□□□□ -0.25
COL4A3BP-203ENST00000380494 LINC01620Q4KN68 170 aa13.48□□□□□ -0.25
COL4A3BP-203ENST00000380494 TINCRA0A1B0GVN0 87 aa13.48□□□□□ -0.25
COL4A3BP-203ENST00000380494 DYNAPQ8N1N2 210 aa13.48□□□□□ -0.25
COL4A3BP-203ENST00000380494 H3BUA1 57 aa13.47□□□□□ -0.25
COL4A3BP-203ENST00000380494 RBX1P62877 108 aa13.47□□□□□ -0.25
COL4A3BP-203ENST00000380494 SUMO4Q6EEV6 95 aa13.47□□□□□ -0.25
COL4A3BP-203ENST00000380494 ALPK2Q86TB3 2170 aa13.47□□□□□ -0.25
COL4A3BP-203ENST00000380494 ZNF561-AS1K7EIQ3 104 aa13.47□□□□□ -0.25
COL4A3BP-203ENST00000380494 ATP5G1P05496 136 aa13.47□□□□□ -0.25
COL4A3BP-203ENST00000380494 KLHL30-AS1Q8NEE0 82 aa13.47□□□□□ -0.25
COL4A3BP-203ENST00000380494 C1orf43Q9BWL3 253 aa13.47□□□□□ -0.25
COL4A3BP-203ENST00000380494 H0YGX0 51 aa13.47□□□□□ -0.25
COL4A3BP-203ENST00000380494 Q6ZS92 163 aa13.47□□□□□ -0.25
COL4A3BP-203ENST00000380494 LINC01619G3V211 115 aa13.46□□□□□ -0.25
COL4A3BP-203ENST00000380494 H3BQ85 93 aa13.46□□□□□ -0.25
COL4A3BP-203ENST00000380494 Q71RC1 249 aaPredicted RBP13.46□□□□□ -0.25
COL4A3BP-203ENST00000380494 GATA3P23771 443 aa13.46□□□□□ -0.25
COL4A3BP-203ENST00000380494 IGLV3-9A0A075B6K5 115 aa13.46□□□□□ -0.25
COL4A3BP-203ENST00000380494 IGHV7-4-1A0A0J9YVY3 117 aa13.46□□□□□ -0.25
COL4A3BP-203ENST00000380494 TRBV6-1A0A0K0K1D8 114 aa13.46□□□□□ -0.25
COL4A3BP-203ENST00000380494 IGFBPL1Q8WX77 278 aa13.46□□□□□ -0.25
COL4A3BP-203ENST00000380494 C17orf77Q96MU5 243 aa13.46□□□□□ -0.26
COL4A3BP-203ENST00000380494 IGHV3-16A0A0C4DH30 117 aa13.46□□□□□ -0.26
COL4A3BP-203ENST00000380494 SLC25A29Q8N8R3 303 aa13.46□□□□□ -0.26
COL4A3BP-203ENST00000380494 CACNA1DQ01668 2161 aa13.45□□□□□ -0.26
COL4A3BP-203ENST00000380494 FAM236AA0A1B0GUQ0 79 aa13.45□□□□□ -0.26
COL4A3BP-203ENST00000380494 FAM236BA0A1B0GV22 79 aa13.45□□□□□ -0.26
COL4A3BP-203ENST00000380494 NKAPP1Q8N9T2 125 aa13.45□□□□□ -0.26
COL4A3BP-203ENST00000380494 TRBV10-2A0A0K0K1G8 114 aa13.45□□□□□ -0.26
COL4A3BP-203ENST00000380494 KAAG1Q9UBP8 84 aa13.45□□□□□ -0.26
COL4A3BP-203ENST00000380494 MUSTN1Q8IVN3 82 aa13.44□□□□□ -0.26
COL4A3BP-203ENST00000380494 PIFOQ8TCI5 191 aa13.44□□□□□ -0.26
COL4A3BP-203ENST00000380494 DOCK3Q8IZD9 2030 aa13.44□□□□□ -0.26
COL4A3BP-203ENST00000380494 AGPAT4-IT1Q9H0P7 198 aa13.44□□□□□ -0.26
COL4A3BP-203ENST00000380494 IGHV3-38A0A0C4DH36 116 aa13.44□□□□□ -0.26
COL4A3BP-203ENST00000380494 H3BT86 120 aa13.44□□□□□ -0.26
COL4A3BP-203ENST00000380494 Q9H8V8 135 aa13.44□□□□□ -0.26
COL4A3BP-203ENST00000380494 F6UB75 175 aa13.44□□□□□ -0.26
COL4A3BP-203ENST00000380494 E9PLD3 99 aa13.43□□□□□ -0.26
COL4A3BP-203ENST00000380494 LINC01356Q8N9X3 169 aa13.43□□□□□ -0.26
COL4A3BP-203ENST00000380494 G3V318 75 aa13.43□□□□□ -0.26
COL4A3BP-203ENST00000380494 IGHV1-69P01742 117 aa13.43□□□□□ -0.26
COL4A3BP-203ENST00000380494 IGHG2P01859 326 aa13.43□□□□□ -0.26
COL4A3BP-203ENST00000380494 TOMM6Q96B49 74 aa13.43□□□□□ -0.26
COL4A3BP-203ENST00000380494 CABIN1Q9Y6J0 2220 aa13.43□□□□□ -0.26
COL4A3BP-203ENST00000380494 C11orf1Q9H5F2 150 aa13.43□□□□□ -0.26
COL4A3BP-203ENST00000380494 VWA8A3KMH1 1905 aa13.43□□□□□ -0.26
COL4A3BP-203ENST00000380494 A4D1N5 150 aa13.43□□□□□ -0.26
COL4A3BP-203ENST00000380494 GTSF1Q8WW33 167 aa13.43□□□□□ -0.26
COL4A3BP-203ENST00000380494 TRAV25A0A0B4J276 109 aa13.42□□□□□ -0.26
COL4A3BP-203ENST00000380494 SPATA12Q7Z6I5 190 aa13.42□□□□□ -0.26
COL4A3BP-203ENST00000380494 TRAV12-2A0A075B6T6 113 aa13.42□□□□□ -0.26
COL4A3BP-203ENST00000380494 A0A1B0GX51 115 aa13.42□□□□□ -0.26
COL4A3BP-203ENST00000380494 XCL2Q9UBD3 114 aa13.42□□□□□ -0.26
COL4A3BP-203ENST00000380494 DEFB130BP0DP73 79 aa13.42□□□□□ -0.26
COL4A3BP-203ENST00000380494 DEFB130AP0DP74 79 aa13.42□□□□□ -0.26
COL4A3BP-203ENST00000380494 NXPH4O95158 308 aa13.41□□□□□ -0.26
COL4A3BP-203ENST00000380494 BPESC1Q9GZL8 116 aa13.41□□□□□ -0.26
COL4A3BP-203ENST00000380494 FOXE3Q13461 319 aa13.41□□□□□ -0.26
COL4A3BP-203ENST00000380494 ZFP2Q6ZN57 461 aa13.41□□□□□ -0.26
COL4A3BP-203ENST00000380494 NBL1P41271 181 aa13.4□□□□□ -0.26
COL4A3BP-203ENST00000380494 GATA1P15976 413 aaPredicted RBP13.4□□□□□ -0.26
COL4A3BP-203ENST00000380494 DIAPH2-AS1Q14236 149 aa13.4□□□□□ -0.26
COL4A3BP-203ENST00000380494 C11orf86A6NJI1 115 aa13.4□□□□□ -0.26
COL4A3BP-203ENST00000380494 C11orf44Q8N8P7 122 aa13.4□□□□□ -0.26
COL4A3BP-203ENST00000380494 FAM167A-AS1Q96KT0 104 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms