RNA–Protein interactions for RNA: ENST00000380097.7

TRIM6-202, Transcript of tripartite motif containing 6, humanhuman

TSL 1 (best) BASIC

Gene TRIM6, Length 3,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-202ENST00000380097 Q6ZT83 130 aa5.74□□□□□ -1.49
TRIM6-202ENST00000380097 RNF7Q9UBF6 113 aa5.74□□□□□ -1.49
TRIM6-202ENST00000380097 HLA-DRB4X5D2U9 266 aa5.74□□□□□ -1.49
TRIM6-202ENST00000380097 TRBV6-1A0A0K0K1D8 114 aa5.74□□□□□ -1.49
TRIM6-202ENST00000380097 MEIG1Q5JSS6 88 aa5.74□□□□□ -1.49
TRIM6-202ENST00000380097 ZFP2Q6ZN57 461 aa5.74□□□□□ -1.49
TRIM6-202ENST00000380097 PIP4P1Q86T03 277 aa5.74□□□□□ -1.49
TRIM6-202ENST00000380097 K7EM74 188 aa5.73□□□□□ -1.49
TRIM6-202ENST00000380097 IGKV3-15P01624 115 aa5.73□□□□□ -1.49
TRIM6-202ENST00000380097 IFITM1P13164 125 aa5.73□□□□□ -1.49
TRIM6-202ENST00000380097 SMCPP49901 116 aaPredicted RBP5.73□□□□□ -1.49
TRIM6-202ENST00000380097 TMEM30BQ3MIR4 351 aa5.73□□□□□ -1.49
TRIM6-202ENST00000380097 RUSC1-AS1Q66K80 236 aa5.73□□□□□ -1.49
TRIM6-202ENST00000380097 ZNF833PQ6ZTB9 187 aa5.73□□□□□ -1.49
TRIM6-202ENST00000380097 KLK15Q9H2R5 256 aa5.73□□□□□ -1.49
TRIM6-202ENST00000380097 ZNF815PA8K554 130 aa5.73□□□□□ -1.49
TRIM6-202ENST00000380097 ZNF785A8K8V0 405 aa5.73□□□□□ -1.49
TRIM6-202ENST00000380097 PAX8Q06710 450 aa5.73□□□□□ -1.49
TRIM6-202ENST00000380097 FHL3Q13643 280 aa5.73□□□□□ -1.49
TRIM6-202ENST00000380097 MORN3Q6PF18 240 aaPredicted RBP5.73□□□□□ -1.49
TRIM6-202ENST00000380097 LYPD1Q8N2G4 141 aa5.73□□□□□ -1.49
TRIM6-202ENST00000380097 KIR2DL4Q99706 377 aa5.73□□□□□ -1.49
TRIM6-202ENST00000380097 VKORC1Q9BQB6 163 aa5.73□□□□□ -1.49
TRIM6-202ENST00000380097 TPSG1Q9NRR2 321 aa5.73□□□□□ -1.49
TRIM6-202ENST00000380097 MSRB1Q9NZV6 116 aa5.73□□□□□ -1.49
TRIM6-202ENST00000380097 NAV3Q8IVL0 2385 aa5.73□□□□□ -1.49
TRIM6-202ENST00000380097 TRBV7-3A0A075B6L6 115 aa5.73□□□□□ -1.49
TRIM6-202ENST00000380097 A0A087WX48 190 aa5.73□□□□□ -1.49
TRIM6-202ENST00000380097 CGB1A6NKQ9 187 aa5.73□□□□□ -1.49
TRIM6-202ENST00000380097 GATA1P15976 413 aaPredicted RBP5.73□□□□□ -1.49
TRIM6-202ENST00000380097 NDUFV3P56181 108 aaKnown RBP5.73□□□□□ -1.49
TRIM6-202ENST00000380097 LAGE3Q14657 143 aa5.73□□□□□ -1.49
TRIM6-202ENST00000380097 ADIPOQQ15848 244 aa5.73□□□□□ -1.49
TRIM6-202ENST00000380097 TMEM78Q5T7P6 136 aa5.73□□□□□ -1.49
TRIM6-202ENST00000380097 H7C1H1 209 aa5.72□□□□□ -1.49
TRIM6-202ENST00000380097 OVOL3O00110 214 aa5.72□□□□□ -1.49
TRIM6-202ENST00000380097 CCL3L1P16619 93 aa5.72□□□□□ -1.49
TRIM6-202ENST00000380097 TNFAIP6P98066 277 aaPredicted RBP5.72□□□□□ -1.49
TRIM6-202ENST00000380097 FAM159AQ6UWV7 190 aa5.72□□□□□ -1.49
TRIM6-202ENST00000380097 SIGLEC15Q6ZMC9 328 aa5.72□□□□□ -1.49
TRIM6-202ENST00000380097 Q8N8P6 123 aa5.72□□□□□ -1.49
TRIM6-202ENST00000380097 SPRR3Q9UBC9 169 aa5.72□□□□□ -1.49
TRIM6-202ENST00000380097 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.72□□□□□ -1.495e-6■■■■□ 23.8
TRIM6-202ENST00000380097 IGKV2-40A0A087WW87 121 aaPredicted RBP5.72□□□□□ -1.49
TRIM6-202ENST00000380097 IGKV2D-40P01614 121 aaPredicted RBP5.72□□□□□ -1.49
TRIM6-202ENST00000380097 EGR2P11161 476 aaPredicted RBP5.72□□□□□ -1.49
TRIM6-202ENST00000380097 MRPL23Q16540 153 aaKnown RBP5.72□□□□□ -1.49
TRIM6-202ENST00000380097 SPRNQ5BIV9 151 aa5.72□□□□□ -1.49
TRIM6-202ENST00000380097 PPP1R27Q86WC6 154 aa5.72□□□□□ -1.49
TRIM6-202ENST00000380097 ANKRD29Q8N6D5 301 aa5.72□□□□□ -1.49
TRIM6-202ENST00000380097 CARD19Q96LW7 228 aa5.72□□□□□ -1.49
TRIM6-202ENST00000380097 PROCRQ9UNN8 238 aa5.72□□□□□ -1.49
TRIM6-202ENST00000380097 M0R1B8 84 aa5.71□□□□□ -1.49
TRIM6-202ENST00000380097 GLRXP35754 106 aa5.71□□□□□ -1.49
TRIM6-202ENST00000380097 EFNA4P52798 201 aa5.71□□□□□ -1.49
TRIM6-202ENST00000380097 Q8TAT8 98 aa5.71□□□□□ -1.49
TRIM6-202ENST00000380097 TMEM190Q8WZ59 177 aa5.71□□□□□ -1.49
TRIM6-202ENST00000380097 RITA1Q96K30 269 aa5.71□□□□□ -1.49
TRIM6-202ENST00000380097 SHANK2-AS3Q9BTD1 123 aa5.71□□□□□ -1.49
TRIM6-202ENST00000380097 ONECUT1Q9UBC0 465 aa5.71□□□□□ -1.49
TRIM6-202ENST00000380097 AGRNO00468 2067 aa5.71□□□□□ -1.49
TRIM6-202ENST00000380097 F8VRH5 84 aa5.71□□□□□ -1.5
TRIM6-202ENST00000380097 GAS8-AS1O95177 125 aa5.71□□□□□ -1.5
TRIM6-202ENST00000380097 HOXB4P17483 251 aaPredicted RBP5.71□□□□□ -1.5
TRIM6-202ENST00000380097 NBL1P41271 181 aa5.71□□□□□ -1.5
TRIM6-202ENST00000380097 DIAPH2-AS1Q14236 149 aa5.71□□□□□ -1.5
TRIM6-202ENST00000380097 IGHV1-18A0A0C4DH31 117 aa5.71□□□□□ -1.5
TRIM6-202ENST00000380097 RHODO00212 210 aa5.71□□□□□ -1.5
TRIM6-202ENST00000380097 CEACAM4O75871 244 aa5.71□□□□□ -1.5
TRIM6-202ENST00000380097 OR11H6Q8NGC7 330 aa5.71□□□□□ -1.5
TRIM6-202ENST00000380097 SCGB3A1Q96QR1 104 aa5.71□□□□□ -1.5
TRIM6-202ENST00000380097 SPRY4Q9C004 299 aa5.71□□□□□ -1.5
TRIM6-202ENST00000380097 SMG1Q96Q15 3661 aaKnown RBP5.71□□□□□ -1.5
TRIM6-202ENST00000380097 PTPRBP23467 1997 aa5.71□□□□□ -1.5
TRIM6-202ENST00000380097 C9JAW5 83 aa5.7□□□□□ -1.5
TRIM6-202ENST00000380097 DTX2Q86UW9 622 aa5.7□□□□□ -1.5
TRIM6-202ENST00000380097 RNF125Q96EQ8 232 aa5.7□□□□□ -1.5
TRIM6-202ENST00000380097 GAFA1Q96PS6 74 aa5.7□□□□□ -1.5
TRIM6-202ENST00000380097 KALRNO60229 2985 aa5.7□□□□□ -1.5
TRIM6-202ENST00000380097 TCL1BO95988 128 aa5.7□□□□□ -1.5
TRIM6-202ENST00000380097 LGALS1P09382 135 aaKnown RBP5.7□□□□□ -1.5
TRIM6-202ENST00000380097 PRR25Q96S07 402 aa5.7□□□□□ -1.5
TRIM6-202ENST00000380097 PRADC1Q9BSG0 188 aa5.7□□□□□ -1.5
TRIM6-202ENST00000380097 CSDC2Q9Y534 153 aaKnown RBP5.7□□□□□ -1.5
TRIM6-202ENST00000380097 ANKHD1Q8IWZ3 2542 aaKnown RBP5.7□□□□□ -1.5
TRIM6-202ENST00000380097 H7C2G1 150 aa5.7□□□□□ -1.5
TRIM6-202ENST00000380097 TNFRSF13BO14836 293 aaPredicted RBP5.7□□□□□ -1.5
TRIM6-202ENST00000380097 SLC25A20O43772 301 aa5.7□□□□□ -1.5
TRIM6-202ENST00000380097 FCN3O75636 299 aa5.7□□□□□ -1.5
TRIM6-202ENST00000380097 LHBP01229 141 aa5.7□□□□□ -1.5
TRIM6-202ENST00000380097 ASIPP42127 132 aa5.7□□□□□ -1.5
TRIM6-202ENST00000380097 CENPEQ02224 2701 aa5.7□□□□□ -1.5
TRIM6-202ENST00000380097 RNF185Q96GF1 192 aa5.7□□□□□ -1.5
TRIM6-202ENST00000380097 PLXNB1O43157 2135 aa5.69□□□□□ -1.5
TRIM6-202ENST00000380097 RPL7P18124 248 aaKnown RBP5.69□□□□□ -1.5
TRIM6-202ENST00000380097 Q1RN00 199 aa5.69□□□□□ -1.5
TRIM6-202ENST00000380097 SPANXA1Q9NS26 97 aa5.69□□□□□ -1.5
TRIM6-202ENST00000380097 TRAV4A0A0B4J268 109 aa5.69□□□□□ -1.5
TRIM6-202ENST00000380097 TRAV25A0A0B4J276 109 aa5.69□□□□□ -1.5
TRIM6-202ENST00000380097 LINC01548A6NM66 108 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms