RNA–Protein interactions for RNA: ENST00000379215.8

ECHDC3-201, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ECHDC3, Length 1,649 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-201ENST00000379215 URGCP-MRPS24S4R325 110 aa18.27■□□□□ 0.51
ECHDC3-201ENST00000379215 TRAV9-1A0A075B6T8 112 aa18.26■□□□□ 0.51
ECHDC3-201ENST00000379215 A8MWL6 223 aa18.26■□□□□ 0.51
ECHDC3-201ENST00000379215 SH2D1AO60880 128 aa18.26■□□□□ 0.51
ECHDC3-201ENST00000379215 CRIP1P50238 77 aa18.26■□□□□ 0.51
ECHDC3-201ENST00000379215 ELOBQ15370 118 aa18.26■□□□□ 0.51
ECHDC3-201ENST00000379215 BEAN1Q3B7T3 259 aa18.26■□□□□ 0.51
ECHDC3-201ENST00000379215 GDF5OSQ5U4N7 250 aa18.26■□□□□ 0.51
ECHDC3-201ENST00000379215 APRG1Q8IVJ8 170 aa18.26■□□□□ 0.51
ECHDC3-201ENST00000379215 XKRY2A2RUG3 117 aa18.25■□□□□ 0.51
ECHDC3-201ENST00000379215 ODF3L2Q3SX64 289 aa18.25■□□□□ 0.51
ECHDC3-201ENST00000379215 ZFAND2AQ8N6M9 145 aa18.25■□□□□ 0.51
ECHDC3-201ENST00000379215 TSKUQ8WUA8 353 aa18.25■□□□□ 0.51
ECHDC3-201ENST00000379215 SREK1IP1Q8N9Q2 155 aaPredicted RBP18.24■□□□□ 0.51
ECHDC3-201ENST00000379215 YPEL4Q96NS1 127 aa18.24■□□□□ 0.51
ECHDC3-201ENST00000379215 FAM231BA6NCW3 169 aa18.23■□□□□ 0.51
ECHDC3-201ENST00000379215 A8MTW9 85 aa18.23■□□□□ 0.51
ECHDC3-201ENST00000379215 GPX1P07203 203 aa18.23■□□□□ 0.51
ECHDC3-201ENST00000379215 RPS20P60866 119 aaKnown RBP18.23■□□□□ 0.51
ECHDC3-201ENST00000379215 RPL19P84098 196 aaKnown RBP18.23■□□□□ 0.51
ECHDC3-201ENST00000379215 ACTL10Q5JWF8 245 aa18.23■□□□□ 0.51
ECHDC3-201ENST00000379215 OR2D3Q8NGH3 330 aa18.23■□□□□ 0.51
ECHDC3-201ENST00000379215 CLUHP3Q96NS8 147 aa18.23■□□□□ 0.51
ECHDC3-201ENST00000379215 GFRA4Q9GZZ7 299 aa18.23■□□□□ 0.51
ECHDC3-201ENST00000379215 TENM1Q9UKZ4 2725 aa18.23■□□□□ 0.51
ECHDC3-201ENST00000379215 TRBV24-1A0A075B6N3 115 aa18.23■□□□□ 0.51
ECHDC3-201ENST00000379215 SMIM27A0A1W2PRY6 76 aa18.23■□□□□ 0.51
ECHDC3-201ENST00000379215 H3BMM0 161 aa18.23■□□□□ 0.51
ECHDC3-201ENST00000379215 ZNF80P51504 273 aaPredicted RBP18.23■□□□□ 0.51
ECHDC3-201ENST00000379215 TRAV21A0A0B4J279 112 aa18.22■□□□□ 0.51
ECHDC3-201ENST00000379215 COLCA2A8K830 154 aa18.22■□□□□ 0.51
ECHDC3-201ENST00000379215 KLLNB2CW77 178 aa18.22■□□□□ 0.51
ECHDC3-201ENST00000379215 TMEM189A5PLL7 270 aa18.21■□□□□ 0.51
ECHDC3-201ENST00000379215 KNCNA6PVL3 124 aa18.21■□□□□ 0.51
ECHDC3-201ENST00000379215 A0A1W2PPQ1 181 aa18.2■□□□□ 0.5
ECHDC3-201ENST00000379215 WIPF1O43516 503 aa18.2■□□□□ 0.5
ECHDC3-201ENST00000379215 CDKN1BP46527 198 aa18.2■□□□□ 0.5
ECHDC3-201ENST00000379215 Q6AWC8 147 aa18.2■□□□□ 0.5
ECHDC3-201ENST00000379215 NAT8BQ9UHF3 227 aa18.2■□□□□ 0.5
ECHDC3-201ENST00000379215 CA1P00915 261 aaPredicted RBP18.2■□□□□ 0.5
ECHDC3-201ENST00000379215 LINC01559Q495D7 138 aa18.2■□□□□ 0.5
ECHDC3-201ENST00000379215 PYGO2Q9BRQ0 406 aa18.2■□□□□ 0.5
ECHDC3-201ENST00000379215 FAM3BP58499 235 aaPredicted RBP18.19■□□□□ 0.5
ECHDC3-201ENST00000379215 STHQ8IWL8 128 aa18.19■□□□□ 0.5
ECHDC3-201ENST00000379215 FBN1P35555 2871 aaKnown RBP18.18■□□□□ 0.5
ECHDC3-201ENST00000379215 AMTNQ6UX39 209 aa18.18■□□□□ 0.5
ECHDC3-201ENST00000379215 GTSCR1Q86UQ5 136 aa18.18■□□□□ 0.5
ECHDC3-201ENST00000379215 FAM210BQ96KR6 192 aa18.18■□□□□ 0.5
ECHDC3-201ENST00000379215 NEU1Q99519 415 aa18.18■□□□□ 0.5
ECHDC3-201ENST00000379215 TGIF2-C20orf24A0A0A6YYL0 155 aa18.17■□□□□ 0.5
ECHDC3-201ENST00000379215 IGKV3-20P01619 116 aa18.17■□□□□ 0.5
ECHDC3-201ENST00000379215 ORM1P02763 201 aa18.17■□□□□ 0.5
ECHDC3-201ENST00000379215 RNASE4P34096 147 aaKnown RBP18.17■□□□□ 0.5
ECHDC3-201ENST00000379215 PRR9Q5T870 116 aa18.17■□□□□ 0.5
ECHDC3-201ENST00000379215 C7orf71A4D174 169 aa18.16■□□□□ 0.5
ECHDC3-201ENST00000379215 HIGD1CA8MV81 97 aa18.16■□□□□ 0.5
ECHDC3-201ENST00000379215 J3KRW8 73 aa18.16■□□□□ 0.5
ECHDC3-201ENST00000379215 AMBPP02760 352 aa18.16■□□□□ 0.5
ECHDC3-201ENST00000379215 RAB5AP20339 215 aa18.16■□□□□ 0.5
ECHDC3-201ENST00000379215 TCL1AP56279 114 aa18.16■□□□□ 0.5
ECHDC3-201ENST00000379215 SPATA3Q8NHX4 192 aa18.16■□□□□ 0.5
ECHDC3-201ENST00000379215 CXCL1P09341 107 aa18.15■□□□□ 0.5
ECHDC3-201ENST00000379215 CD7P09564 240 aa18.15■□□□□ 0.5
ECHDC3-201ENST00000379215 FOXA3P55318 350 aaPredicted RBP18.15■□□□□ 0.5
ECHDC3-201ENST00000379215 ZNF124Q15973 351 aa18.15■□□□□ 0.5
ECHDC3-201ENST00000379215 TYMSP04818 313 aa18.14■□□□□ 0.49
ECHDC3-201ENST00000379215 IGLL1P15814 213 aa18.14■□□□□ 0.49
ECHDC3-201ENST00000379215 NUTF2P61970 127 aaKnown RBP18.14■□□□□ 0.49
ECHDC3-201ENST00000379215 SPINK13Q1W4C9 94 aa18.14■□□□□ 0.49
ECHDC3-201ENST00000379215 PRR31Q5SQ13 230 aa18.14■□□□□ 0.49
ECHDC3-201ENST00000379215 TRPT1Q86TN4 253 aaKnown RBP18.13■□□□□ 0.49
ECHDC3-201ENST00000379215 NUP35Q8NFH5 326 aa18.13■□□□□ 0.49
ECHDC3-201ENST00000379215 C19orf73Q9NVV2 129 aa18.13■□□□□ 0.49
ECHDC3-201ENST00000379215 COX19Q49B96 90 aa18.12■□□□□ 0.49
ECHDC3-201ENST00000379215 GFI1BQ5VTD9 330 aa18.12■□□□□ 0.49
ECHDC3-201ENST00000379215 ATP5L2Q7Z4Y8 100 aa18.12■□□□□ 0.49
ECHDC3-201ENST00000379215 GTSF1Q8WW33 167 aa18.12■□□□□ 0.49
ECHDC3-201ENST00000379215 M0R2Z0 102 aa18.12■□□□□ 0.49
ECHDC3-201ENST00000379215 TMSB15BA0A087X1C1 80 aa18.11■□□□□ 0.49
ECHDC3-201ENST00000379215 RASL11AQ6T310 242 aa18.11■□□□□ 0.49
ECHDC3-201ENST00000379215 BORCS7Q96B45 105 aa18.11■□□□□ 0.49
ECHDC3-201ENST00000379215 KCNS1Q96KK3 526 aa18.11■□□□□ 0.49
ECHDC3-201ENST00000379215 ZMAT5Q9UDW3 170 aaKnown RBP18.11■□□□□ 0.49
ECHDC3-201ENST00000379215 IGKV3D-20A0A0C4DH25 116 aa18.1■□□□□ 0.49
ECHDC3-201ENST00000379215 C20orf144Q9BQM9 153 aa18.1■□□□□ 0.49
ECHDC3-201ENST00000379215 SRD5A3Q9H8P0 318 aa18.1■□□□□ 0.49
ECHDC3-201ENST00000379215 RBMY1BA6NDE4 496 aaKnown RBP18.09■□□□□ 0.49
ECHDC3-201ENST00000379215 RBMY1EA6NEQ0 496 aaKnown RBP18.09■□□□□ 0.49
ECHDC3-201ENST00000379215 RBMY1DP0C7P1 496 aaKnown RBP18.09■□□□□ 0.49
ECHDC3-201ENST00000379215 GZMBP10144 247 aa18.09■□□□□ 0.49
ECHDC3-201ENST00000379215 KIR3DS1Q14943 382 aa18.09■□□□□ 0.49
ECHDC3-201ENST00000379215 FAM159AQ6UWV7 190 aa18.09■□□□□ 0.49
ECHDC3-201ENST00000379215 NAGKQ9UJ70 344 aa18.09■□□□□ 0.49
ECHDC3-201ENST00000379215 TRAV12-3A0A0B4J271 114 aa18.09■□□□□ 0.49
ECHDC3-201ENST00000379215 RPS10P46783 165 aaKnown RBP18.09■□□□□ 0.49
ECHDC3-201ENST00000379215 FER1L6-AS1Q8NA97 138 aa18.09■□□□□ 0.49
ECHDC3-201ENST00000379215 C11orf21Q9P2W6 132 aa18.09■□□□□ 0.49
ECHDC3-201ENST00000379215 TRAV12-2A0A075B6T6 113 aa18.08■□□□□ 0.48
ECHDC3-201ENST00000379215 ZNF324O75467 553 aaPredicted RBP18.08■□□□□ 0.48
ECHDC3-201ENST00000379215 WDR73Q6P4I2 378 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms