RNA–Protein interactions for RNA: ENST00000378746.8

KIF3A-202, Transcript of kinesin family member 3A, humanhuman

APPRIS P3 TSL 5 BASIC

Gene KIF3A, Length 6,325 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIF3A-202ENST00000378746 UBE2E2Q96LR5 201 aa12.38□□□□□ -0.43
KIF3A-202ENST00000378746 GP9P14770 177 aa12.37□□□□□ -0.43
KIF3A-202ENST00000378746 SPANXCQ9NY87 97 aa12.37□□□□□ -0.43
KIF3A-202ENST00000378746 GNLYP22749 145 aa12.37□□□□□ -0.43
KIF3A-202ENST00000378746 FANCMQ8IYD8 2048 aa12.37□□□□□ -0.43
KIF3A-202ENST00000378746 IGHV7-4-1A0A0J9YVY3 117 aa12.37□□□□□ -0.43
KIF3A-202ENST00000378746 SCRT2Q9NQ03 307 aa12.37□□□□□ -0.43
KIF3A-202ENST00000378746 K7ERJ3 54 aa12.37□□□□□ -0.43
KIF3A-202ENST00000378746 RPL35AP18077 110 aaKnown RBP12.37□□□□□ -0.43
KIF3A-202ENST00000378746 PLXND1Q9Y4D7 1925 aa12.36□□□□□ -0.43
KIF3A-202ENST00000378746 KLK9Q9UKQ9 250 aa12.36□□□□□ -0.43
KIF3A-202ENST00000378746 H3BMG7 143 aa12.36□□□□□ -0.43
KIF3A-202ENST00000378746 EGR2P11161 476 aaPredicted RBP12.36□□□□□ -0.43
KIF3A-202ENST00000378746 FAM215AQ9Y5M1 114 aa12.36□□□□□ -0.43
KIF3A-202ENST00000378746 HERVK_113P63121 156 aa12.36□□□□□ -0.43
KIF3A-202ENST00000378746 TRAV13-2A0A0B4J235 113 aa12.35□□□□□ -0.43
KIF3A-202ENST00000378746 C11orf44Q8N8P7 122 aa12.35□□□□□ -0.43
KIF3A-202ENST00000378746 C11orf1Q9H5F2 150 aa12.35□□□□□ -0.43
KIF3A-202ENST00000378746 NUP210Q8TEM1 1887 aaPredicted RBP12.35□□□□□ -0.43
KIF3A-202ENST00000378746 ZNF48Q96MX3 618 aaPredicted RBP12.35□□□□□ -0.43
KIF3A-202ENST00000378746 MED12Q93074 2177 aa12.35□□□□□ -0.43
KIF3A-202ENST00000378746 INS-IGF2F8WCM5 200 aa12.35□□□□□ -0.43
KIF3A-202ENST00000378746 K7ENP7 123 aa12.35□□□□□ -0.43
KIF3A-202ENST00000378746 NUPR1O60356 82 aa12.35□□□□□ -0.43
KIF3A-202ENST00000378746 AZU1P20160 251 aa12.35□□□□□ -0.43
KIF3A-202ENST00000378746 CCL25O15444 150 aa12.34□□□□□ -0.43
KIF3A-202ENST00000378746 TMEM243Q9BU79 118 aa12.34□□□□□ -0.43
KIF3A-202ENST00000378746 DYNAPQ8N1N2 210 aa12.34□□□□□ -0.43
KIF3A-202ENST00000378746 IGHG4P01861 327 aa12.34□□□□□ -0.43
KIF3A-202ENST00000378746 PRSS29PA6NIE9 313 aa12.34□□□□□ -0.43
KIF3A-202ENST00000378746 PLA2G2CQ5R387 149 aa12.34□□□□□ -0.43
KIF3A-202ENST00000378746 KNCNA6PVL3 124 aa12.33□□□□□ -0.43
KIF3A-202ENST00000378746 C17orf77Q96MU5 243 aa12.33□□□□□ -0.43
KIF3A-202ENST00000378746 CARD19Q96LW7 228 aa12.33□□□□□ -0.44
KIF3A-202ENST00000378746 PLXNB3Q9ULL4 1909 aa12.33□□□□□ -0.44
KIF3A-202ENST00000378746 F8WEM9 126 aa12.33□□□□□ -0.44
KIF3A-202ENST00000378746 NPBQ8NG41 125 aa12.33□□□□□ -0.44
KIF3A-202ENST00000378746 CFHR4Q92496 578 aa12.33□□□□□ -0.44
KIF3A-202ENST00000378746 GAGE12JA6NER3 117 aa12.33□□□□□ -0.44
KIF3A-202ENST00000378746 J3QLI3 93 aa12.33□□□□□ -0.44
KIF3A-202ENST00000378746 GAGE4Q13068 117 aa12.33□□□□□ -0.44
KIF3A-202ENST00000378746 GAGE5Q13069 117 aa12.33□□□□□ -0.44
KIF3A-202ENST00000378746 AGPAT4-IT1Q9H0P7 198 aa12.33□□□□□ -0.44
KIF3A-202ENST00000378746 ASPHD1Q5U4P2 390 aa12.33□□□□□ -0.44
KIF3A-202ENST00000378746 TRBV6-1A0A0K0K1D8 114 aa12.32□□□□□ -0.44
KIF3A-202ENST00000378746 I3L2K1 104 aa12.32□□□□□ -0.44
KIF3A-202ENST00000378746 ZNF625Q96I27 306 aaPredicted RBP12.32□□□□□ -0.44
KIF3A-202ENST00000378746 HIGD1BQ9P298 99 aa12.32□□□□□ -0.44
KIF3A-202ENST00000378746 CFC1BP0CG36 223 aa12.32□□□□□ -0.44
KIF3A-202ENST00000378746 CFC1P0CG37 223 aa12.32□□□□□ -0.44
KIF3A-202ENST00000378746 PCP2Q8IVA1 136 aa12.31□□□□□ -0.44
KIF3A-202ENST00000378746 MORN5Q5VZ52 161 aa12.31□□□□□ -0.44
KIF3A-202ENST00000378746 IGFBPL1Q8WX77 278 aa12.31□□□□□ -0.44
KIF3A-202ENST00000378746 UBL5Q9BZL1 73 aa12.31□□□□□ -0.44
KIF3A-202ENST00000378746 ASXL3Q9C0F0 2248 aa12.31□□□□□ -0.44
KIF3A-202ENST00000378746 KIAA1671Q9BY89 1806 aa12.31□□□□□ -0.44
KIF3A-202ENST00000378746 PRSS47A8MTI9 375 aa12.31□□□□□ -0.44
KIF3A-202ENST00000378746 IGLL5B9A064 214 aa12.3□□□□□ -0.44
KIF3A-202ENST00000378746 PATE2Q6UY27 113 aa12.3□□□□□ -0.44
KIF3A-202ENST00000378746 RNF114Q9Y508 228 aa12.3□□□□□ -0.44
KIF3A-202ENST00000378746 FOXI2Q6ZQN5 318 aa12.3□□□□□ -0.44
KIF3A-202ENST00000378746 FAM167A-AS1Q96KT0 104 aa12.3□□□□□ -0.44
KIF3A-202ENST00000378746 CTSZQ9UBR2 303 aa12.3□□□□□ -0.44
KIF3A-202ENST00000378746 ZNRF2Q8NHG8 242 aa12.3□□□□□ -0.44
KIF3A-202ENST00000378746 XCL2Q9UBD3 114 aa12.3□□□□□ -0.44
KIF3A-202ENST00000378746 KIAA2026Q5HYC2 2103 aa12.3□□□□□ -0.44
KIF3A-202ENST00000378746 ELANEP08246 267 aa12.29□□□□□ -0.44
KIF3A-202ENST00000378746 HOXB4P17483 251 aaPredicted RBP12.29□□□□□ -0.44
KIF3A-202ENST00000378746 UNQ6494/PRO21346Q6UXR6 183 aa12.29□□□□□ -0.44
KIF3A-202ENST00000378746 PRR30Q53SZ7 412 aaPredicted RBP12.29□□□□□ -0.44
KIF3A-202ENST00000378746 ACYP1P07311 99 aa12.29□□□□□ -0.44
KIF3A-202ENST00000378746 TCTEX1D4Q5JR98 221 aa12.29□□□□□ -0.44
KIF3A-202ENST00000378746 AMTNQ6UX39 209 aa12.28□□□□□ -0.44
KIF3A-202ENST00000378746 TRAV12-1A0A0B4J245 112 aa12.28□□□□□ -0.44
KIF3A-202ENST00000378746 RPL32P62910 135 aaKnown RBP12.28□□□□□ -0.44
KIF3A-202ENST00000378746 IGFL2Q6UWQ7 119 aa12.28□□□□□ -0.44
KIF3A-202ENST00000378746 SPTA1P02549 2419 aa12.28□□□□□ -0.44
KIF3A-202ENST00000378746 TRAV12-2A0A075B6T6 113 aa12.28□□□□□ -0.44
KIF3A-202ENST00000378746 IGHV3-16A0A0C4DH30 117 aa12.28□□□□□ -0.44
KIF3A-202ENST00000378746 IGLV2-14P01704 120 aa12.28□□□□□ -0.44
KIF3A-202ENST00000378746 K7EIM0 57 aa12.27□□□□□ -0.44
KIF3A-202ENST00000378746 DEFB130BP0DP73 79 aa12.27□□□□□ -0.44
KIF3A-202ENST00000378746 DEFB130AP0DP74 79 aa12.27□□□□□ -0.44
KIF3A-202ENST00000378746 ANKRD29Q8N6D5 301 aa12.27□□□□□ -0.44
KIF3A-202ENST00000378746 IGLV11-55A0A075B6I3 123 aa12.27□□□□□ -0.45
KIF3A-202ENST00000378746 ANKRD39Q53RE8 183 aa12.27□□□□□ -0.45
KIF3A-202ENST00000378746 NTN5Q8WTR8 489 aaPredicted RBP12.27□□□□□ -0.45
KIF3A-202ENST00000378746 C22orf46C9J442 243 aa12.27□□□□□ -0.45
KIF3A-202ENST00000378746 TDRG1Q3Y452 100 aa12.27□□□□□ -0.45
KIF3A-202ENST00000378746 FOXE3Q13461 319 aa12.26□□□□□ -0.45
KIF3A-202ENST00000378746 HERV-K104P63124 156 aa12.26□□□□□ -0.45
KIF3A-202ENST00000378746 WI2-2373I1.2A0A1W2PRP0 233 aa12.26□□□□□ -0.45
KIF3A-202ENST00000378746 IGKV1-17P01599 117 aa12.26□□□□□ -0.45
KIF3A-202ENST00000378746 Q6ZVH6 145 aa12.26□□□□□ -0.45
KIF3A-202ENST00000378746 COL4A3Q01955 1670 aa12.26□□□□□ -0.45
KIF3A-202ENST00000378746 PI4KAP42356 2102 aa12.25□□□□□ -0.45
KIF3A-202ENST00000378746 GAGE7O76087 117 aa12.25□□□□□ -0.45
KIF3A-202ENST00000378746 TRACP01848 142 aa12.25□□□□□ -0.45
KIF3A-202ENST00000378746 GAGE12FP0CL80 117 aa12.25□□□□□ -0.45
KIF3A-202ENST00000378746 GAGE12GP0CL81 117 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms