RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 ITSN1Q15811 1721 aa5.19□□□□□ -1.58
UBR4-204ENST00000375254 TEX22C9J3V5 150 aa5.19□□□□□ -1.58
UBR4-204ENST00000375254 IGHV3-23P01764 117 aa5.19□□□□□ -1.58
UBR4-204ENST00000375254 ZNF576Q9H609 170 aa5.19□□□□□ -1.58
UBR4-204ENST00000375254 A0A087WV48 116 aa5.19□□□□□ -1.58
UBR4-204ENST00000375254 ASPHD1Q5U4P2 390 aa5.19□□□□□ -1.58
UBR4-204ENST00000375254 MUC7Q8TAX7 377 aa5.19□□□□□ -1.58
UBR4-204ENST00000375254 A0A0J9YX75 114 aa5.19□□□□□ -1.58
UBR4-204ENST00000375254 KIF26BQ2KJY2 2108 aa5.19□□□□□ -1.58
UBR4-204ENST00000375254 ITLN2Q8WWU7 325 aaPredicted RBP5.18□□□□□ -1.58
UBR4-204ENST00000375254 PCOLCEQ15113 449 aa5.18□□□□□ -1.58
UBR4-204ENST00000375254 NEXN-AS1Q8NBZ9 246 aa5.18□□□□□ -1.58
UBR4-204ENST00000375254 FGF23Q9GZV9 251 aaPredicted RBP5.18□□□□□ -1.58
UBR4-204ENST00000375254 A0A0J9YY99 117 aa5.18□□□□□ -1.58
UBR4-204ENST00000375254 CLEC2BQ92478 149 aa5.18□□□□□ -1.58
UBR4-204ENST00000375254 C8orf49Q96NF6 230 aa5.18□□□□□ -1.58
UBR4-204ENST00000375254 TMEM223A0PJW6 202 aa5.18□□□□□ -1.58
UBR4-204ENST00000375254 NDUFA4O00483 81 aa5.18□□□□□ -1.58
UBR4-204ENST00000375254 RHPN1-AS1Q9BWJ2 59 aa5.18□□□□□ -1.58
UBR4-204ENST00000375254 FANCMQ8IYD8 2048 aa5.18□□□□□ -1.58
UBR4-204ENST00000375254 FGFBP3Q8TAT2 258 aa5.18□□□□□ -1.58
UBR4-204ENST00000375254 RMI2Q96E14 147 aa5.18□□□□□ -1.58
UBR4-204ENST00000375254 C2CD3Q4AC94 2353 aa5.18□□□□□ -1.58
UBR4-204ENST00000375254 FHL1Q13642 323 aa5.18□□□□□ -1.58
UBR4-204ENST00000375254 GAFA1Q96PS6 74 aa5.18□□□□□ -1.58
UBR4-204ENST00000375254 TRBV27A0A0K0K1C4 114 aa5.18□□□□□ -1.58
UBR4-204ENST00000375254 CD177Q8N6Q3 437 aa5.18□□□□□ -1.58
UBR4-204ENST00000375254 IGLV3-1P01715 115 aa5.18□□□□□ -1.58
UBR4-204ENST00000375254 C11orf1Q9H5F2 150 aa5.18□□□□□ -1.58
UBR4-204ENST00000375254 H7C423 109 aa5.18□□□□□ -1.58
UBR4-204ENST00000375254 IGHV1-2P23083 117 aa5.18□□□□□ -1.58
UBR4-204ENST00000375254 C1orf53Q5VUE5 145 aa5.18□□□□□ -1.58
UBR4-204ENST00000375254 SP5Q6BEB4 398 aaPredicted RBP5.18□□□□□ -1.58
UBR4-204ENST00000375254 Q8TAT8 98 aa5.18□□□□□ -1.58
UBR4-204ENST00000375254 TIRAPP58753 221 aa5.17□□□□□ -1.58
UBR4-204ENST00000375254 DEFB132Q7Z7B7 95 aa5.17□□□□□ -1.58
UBR4-204ENST00000375254 CELA1Q9UNI1 258 aa5.17□□□□□ -1.58
UBR4-204ENST00000375254 C4orf51C9J302 202 aa5.17□□□□□ -1.58
UBR4-204ENST00000375254 C15orf65H3BRN8 121 aa5.17□□□□□ -1.58
UBR4-204ENST00000375254 IGKV1-16P04430 117 aa5.17□□□□□ -1.58
UBR4-204ENST00000375254 IGKV1-39P01597 117 aa5.17□□□□□ -1.58
UBR4-204ENST00000375254 IGKV1D-39P04432 117 aa5.17□□□□□ -1.58
UBR4-204ENST00000375254 COL8A2P25067 703 aa5.17□□□□□ -1.58
UBR4-204ENST00000375254 ZNF837Q96EG3 531 aaPredicted RBP5.17□□□□□ -1.58
UBR4-204ENST00000375254 LECT2O14960 151 aa5.17□□□□□ -1.58
UBR4-204ENST00000375254 MRPS12O15235 138 aaKnown RBP5.17□□□□□ -1.58
UBR4-204ENST00000375254 IGHV3-30-3P0DP02 117 aa5.17□□□□□ -1.58
UBR4-204ENST00000375254 XCL1P47992 114 aa5.17□□□□□ -1.58
UBR4-204ENST00000375254 XCL2Q9UBD3 114 aa5.17□□□□□ -1.58
UBR4-204ENST00000375254 TMEM178BH3BS89 294 aa5.17□□□□□ -1.58
UBR4-204ENST00000375254 LST1O00453 97 aa5.17□□□□□ -1.58
UBR4-204ENST00000375254 PIP4P2Q8N4L2 257 aa5.17□□□□□ -1.58
UBR4-204ENST00000375254 ZNF491Q8N8L2 437 aa5.17□□□□□ -1.58
UBR4-204ENST00000375254 CASC2Q6XLA1 102 aa5.16□□□□□ -1.58
UBR4-204ENST00000375254 APRG1Q8IVJ8 170 aa5.16□□□□□ -1.58
UBR4-204ENST00000375254 Q6ZSR3 168 aa5.16□□□□□ -1.58
UBR4-204ENST00000375254 IGHV3-30P01768 117 aa5.16□□□□□ -1.58
UBR4-204ENST00000375254 IGHV3-30-5P0DP03 117 aa5.16□□□□□ -1.58
UBR4-204ENST00000375254 H3BUA1 57 aa5.16□□□□□ -1.58
UBR4-204ENST00000375254 ZNF80P51504 273 aaPredicted RBP5.16□□□□□ -1.58
UBR4-204ENST00000375254 MED13Q9UHV7 2174 aa5.16□□□□□ -1.58
UBR4-204ENST00000375254 DKK1O94907 266 aa5.16□□□□□ -1.58
UBR4-204ENST00000375254 TRAV26-2A0A0B4J265 109 aa5.16□□□□□ -1.58
UBR4-204ENST00000375254 IGHV3-73A0A0B4J1V6 119 aa5.16□□□□□ -1.58
UBR4-204ENST00000375254 MBD6Q96DN6 1003 aa5.15□□□□□ -1.58
UBR4-204ENST00000375254 TRBV10-1A0A0K0K1A3 114 aa5.15□□□□□ -1.58
UBR4-204ENST00000375254 LYPD6Q86Y78 171 aa5.15□□□□□ -1.58
UBR4-204ENST00000375254 TRPM6Q9BX84 2022 aa5.15□□□□□ -1.58
UBR4-204ENST00000375254 TRIAP1O43715 76 aa5.15□□□□□ -1.58
UBR4-204ENST00000375254 CCKP06307 115 aa5.15□□□□□ -1.58
UBR4-204ENST00000375254 CD164Q04900 197 aa5.15□□□□□ -1.58
UBR4-204ENST00000375254 ATG2BQ96BY7 2078 aa5.15□□□□□ -1.59
UBR4-204ENST00000375254 AJUBAQ96IF1 538 aa5.15□□□□□ -1.59
UBR4-204ENST00000375254 IBA57-AS1B1ANH7 110 aa5.15□□□□□ -1.59
UBR4-204ENST00000375254 UBE2D3P61077 147 aa5.15□□□□□ -1.59
UBR4-204ENST00000375254 UBE2D2P62837 147 aa5.15□□□□□ -1.59
UBR4-204ENST00000375254 TMEM92Q6UXU6 159 aa5.15□□□□□ -1.59
UBR4-204ENST00000375254 CAMTA1Q9Y6Y1 1673 aa5.15□□□□□ -1.59
UBR4-204ENST00000375254 TRIP6Q15654 476 aaKnown RBP5.14□□□□□ -1.59
UBR4-204ENST00000375254 PYGO1Q9Y3Y4 419 aa5.14□□□□□ -1.59
UBR4-204ENST00000375254 CD164L2Q6UWJ8 174 aa5.14□□□□□ -1.59
UBR4-204ENST00000375254 CDIP1Q9H305 208 aa5.14□□□□□ -1.59
UBR4-204ENST00000375254 FAM208BQ5VWN6 2430 aa5.14□□□□□ -1.59
UBR4-204ENST00000375254 ZC3H13Q5T200 1668 aaKnown RBP5.14□□□□□ -1.59
UBR4-204ENST00000375254 FAM110DQ8TAY7 271 aaPredicted RBP5.14□□□□□ -1.59
UBR4-204ENST00000375254 ZMAT4Q9H898 229 aa5.14□□□□□ -1.59
UBR4-204ENST00000375254 SPINK2P20155 84 aa5.14□□□□□ -1.59
UBR4-204ENST00000375254 C9orf85Q96MD7 179 aa5.14□□□□□ -1.59
UBR4-204ENST00000375254 C5orf63A6NC05 138 aa5.14□□□□□ -1.59
UBR4-204ENST00000375254 INSL3P51460 131 aa5.14□□□□□ -1.59
UBR4-204ENST00000375254 ESRGQ1W209 222 aa5.14□□□□□ -1.59
UBR4-204ENST00000375254 VMO1Q7Z5L0 202 aa5.14□□□□□ -1.59
UBR4-204ENST00000375254 ZNF883P0CG24 379 aa5.14□□□□□ -1.59
UBR4-204ENST00000375254 IGKV1D-17A0A075B6S4 117 aa5.14□□□□□ -1.59
UBR4-204ENST00000375254 WT1-ASQ06250 92 aa5.14□□□□□ -1.59
UBR4-204ENST00000375254 ZFAND3Q9H8U3 227 aa5.14□□□□□ -1.59
UBR4-204ENST00000375254 SMCHD1A6NHR9 2005 aa5.13□□□□□ -1.59
UBR4-204ENST00000375254 TRBV7-6A0A0J9YX20 115 aa5.13□□□□□ -1.59
UBR4-204ENST00000375254 DSCR9P59020 149 aa5.13□□□□□ -1.59
UBR4-204ENST00000375254 LOXP28300 417 aaPredicted RBP5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms