RNA–Protein interactions for RNA: ENST00000374338.4

LDLRAP1-201, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAP1, Length 2,940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-201ENST00000374338 SMCPP49901 116 aaPredicted RBP13.55□□□□□ -0.24
LDLRAP1-201ENST00000374338 PAX8Q06710 450 aa13.55□□□□□ -0.24
LDLRAP1-201ENST00000374338 ATP6V0E2Q8NHE4 81 aa13.55□□□□□ -0.24
LDLRAP1-201ENST00000374338 SIGLEC9Q9Y336 463 aa13.55□□□□□ -0.24
LDLRAP1-201ENST00000374338 TMEM213A2RRL7 107 aa13.54□□□□□ -0.24
LDLRAP1-201ENST00000374338 PRSS29PA6NIE9 313 aa13.54□□□□□ -0.24
LDLRAP1-201ENST00000374338 TIMM23O14925 209 aa13.54□□□□□ -0.24
LDLRAP1-201ENST00000374338 ZNF562Q6V9R5 426 aa13.54□□□□□ -0.24
LDLRAP1-201ENST00000374338 SMIM20Q8N5G0 67 aa13.54□□□□□ -0.24
LDLRAP1-201ENST00000374338 C17orf77Q96MU5 243 aa13.54□□□□□ -0.24
LDLRAP1-201ENST00000374338 Q6AWC8 147 aa13.54□□□□□ -0.24
LDLRAP1-201ENST00000374338 LCNL1Q6ZST4 164 aa13.54□□□□□ -0.24
LDLRAP1-201ENST00000374338 SRSF1Q07955 248 aaKnown RBP eCLIP13.53□□□□□ -0.24
LDLRAP1-201ENST00000374338 LY6DQ14210 128 aa13.53□□□□□ -0.24
LDLRAP1-201ENST00000374338 PPP1R27Q86WC6 154 aa13.53□□□□□ -0.24
LDLRAP1-201ENST00000374338 B9A039 149 aa13.53□□□□□ -0.24
LDLRAP1-201ENST00000374338 RPL32P62910 135 aaKnown RBP13.53□□□□□ -0.24
LDLRAP1-201ENST00000374338 AMN1Q8IY45 258 aa13.53□□□□□ -0.24
LDLRAP1-201ENST00000374338 SRSF8Q9BRL6 282 aaKnown RBP13.53□□□□□ -0.24
LDLRAP1-201ENST00000374338 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.53□□□□□ -0.242e-7■■■□□ 15.8
LDLRAP1-201ENST00000374338 NHLRC4P0CG21 123 aaPredicted RBP13.53□□□□□ -0.24
LDLRAP1-201ENST00000374338 SUB1P53999 127 aaKnown RBP eCLIP13.53□□□□□ -0.24
LDLRAP1-201ENST00000374338 VKORC1Q9BQB6 163 aa13.53□□□□□ -0.24
LDLRAP1-201ENST00000374338 IGLV1-47P01700 117 aa13.52□□□□□ -0.24
LDLRAP1-201ENST00000374338 PKD1L2Q7Z442 2459 aa13.52□□□□□ -0.25
LDLRAP1-201ENST00000374338 POLQO75417 2590 aa13.52□□□□□ -0.25
LDLRAP1-201ENST00000374338 CFAP126Q5VTH2 177 aa13.52□□□□□ -0.25
LDLRAP1-201ENST00000374338 Q86TA4 180 aa13.52□□□□□ -0.25
LDLRAP1-201ENST00000374338 GTSCR1Q86UQ5 136 aa13.51□□□□□ -0.25
LDLRAP1-201ENST00000374338 ZMAT4Q9H898 229 aa13.51□□□□□ -0.25
LDLRAP1-201ENST00000374338 CACNA1AO00555 2505 aa13.51□□□□□ -0.25
LDLRAP1-201ENST00000374338 ZFAND6Q6FIF0 208 aa13.5□□□□□ -0.25
LDLRAP1-201ENST00000374338 ATP5IP56385 69 aaPredicted RBP13.5□□□□□ -0.25
LDLRAP1-201ENST00000374338 ADORA2A-AS1P86434 159 aa13.5□□□□□ -0.25
LDLRAP1-201ENST00000374338 ODF1Q14990 250 aa13.5□□□□□ -0.25
LDLRAP1-201ENST00000374338 PSMG4Q5JS54 123 aa13.5□□□□□ -0.25
LDLRAP1-201ENST00000374338 KAAG1Q9UBP8 84 aa13.5□□□□□ -0.25
LDLRAP1-201ENST00000374338 U3KQK5 164 aa13.5□□□□□ -0.25
LDLRAP1-201ENST00000374338 TEX22C9J3V5 150 aa13.5□□□□□ -0.25
LDLRAP1-201ENST00000374338 IGLV2-11P01706 119 aa13.5□□□□□ -0.25
LDLRAP1-201ENST00000374338 GP9P14770 177 aa13.5□□□□□ -0.25
LDLRAP1-201ENST00000374338 A0A1B0GW15 77 aa13.49□□□□□ -0.25
LDLRAP1-201ENST00000374338 A0A1W2PPR1 153 aa13.49□□□□□ -0.25
LDLRAP1-201ENST00000374338 ANXA2RQ3ZCQ2 193 aa13.49□□□□□ -0.25
LDLRAP1-201ENST00000374338 MAPKAPK5-AS1Q8N8E1 139 aa13.49□□□□□ -0.25
LDLRAP1-201ENST00000374338 CARD19Q96LW7 228 aa13.49□□□□□ -0.25
LDLRAP1-201ENST00000374338 MYO18BQ8IUG5 2567 aa13.49□□□□□ -0.25
LDLRAP1-201ENST00000374338 NCBP2LA6PVI3 153 aaKnown RBP13.49□□□□□ -0.25
LDLRAP1-201ENST00000374338 ZNF493Q6ZR52 646 aa13.49□□□□□ -0.25
LDLRAP1-201ENST00000374338 LINC00311Q8N616 119 aa13.49□□□□□ -0.25
LDLRAP1-201ENST00000374338 TEX29Q8N6K0 151 aa13.49□□□□□ -0.25
LDLRAP1-201ENST00000374338 M0R3E3 92 aa13.48□□□□□ -0.25
LDLRAP1-201ENST00000374338 GAS8-AS1O95177 125 aa13.48□□□□□ -0.25
LDLRAP1-201ENST00000374338 ORMDL3Q8N138 153 aa13.48□□□□□ -0.25
LDLRAP1-201ENST00000374338 PTH2Q96A98 100 aa13.48□□□□□ -0.25
LDLRAP1-201ENST00000374338 CRIP1P50238 77 aa13.48□□□□□ -0.25
LDLRAP1-201ENST00000374338 TAL2Q16559 108 aa13.48□□□□□ -0.25
LDLRAP1-201ENST00000374338 DYNAPQ8N1N2 210 aa13.48□□□□□ -0.25
LDLRAP1-201ENST00000374338 HIF1ANQ9NWT6 349 aa13.48□□□□□ -0.25
LDLRAP1-201ENST00000374338 EVI2AP22794 236 aa13.47□□□□□ -0.25
LDLRAP1-201ENST00000374338 FCER1GP30273 86 aa13.47□□□□□ -0.25
LDLRAP1-201ENST00000374338 IGFL4Q6B9Z1 124 aa13.47□□□□□ -0.25
LDLRAP1-201ENST00000374338 C8orf46Q8TAG6 207 aa13.47□□□□□ -0.25
LDLRAP1-201ENST00000374338 C8orf49Q96NF6 230 aa13.47□□□□□ -0.25
LDLRAP1-201ENST00000374338 TNFRSF18Q9Y5U5 241 aa13.47□□□□□ -0.25
LDLRAP1-201ENST00000374338 IGKCP01834 107 aa13.47□□□□□ -0.25
LDLRAP1-201ENST00000374338 ZC2HC1BQ5TFG8 222 aa13.47□□□□□ -0.25
LDLRAP1-201ENST00000374338 FAM104BQ5XKR9 115 aa13.47□□□□□ -0.25
LDLRAP1-201ENST00000374338 CLEC3BP05452 202 aa13.46□□□□□ -0.25
LDLRAP1-201ENST00000374338 TMEM30BQ3MIR4 351 aa13.46□□□□□ -0.25
LDLRAP1-201ENST00000374338 MORN3Q6PF18 240 aaPredicted RBP13.46□□□□□ -0.25
LDLRAP1-201ENST00000374338 CSPG4Q6UVK1 2322 aa13.46□□□□□ -0.25
LDLRAP1-201ENST00000374338 HIST1H4GQ99525 98 aa13.46□□□□□ -0.25
LDLRAP1-201ENST00000374338 ZANQ9Y493 2812 aa13.46□□□□□ -0.25
LDLRAP1-201ENST00000374338 LINC01548A6NM66 108 aa13.46□□□□□ -0.26
LDLRAP1-201ENST00000374338 CRYGBP07316 175 aa13.45□□□□□ -0.26
LDLRAP1-201ENST00000374338 MRPL51Q4U2R6 128 aaKnown RBP13.45□□□□□ -0.26
LDLRAP1-201ENST00000374338 THAP8Q8NA92 274 aa13.45□□□□□ -0.26
LDLRAP1-201ENST00000374338 PPDPFLQ8WWR9 84 aa13.45□□□□□ -0.26
LDLRAP1-201ENST00000374338 PIEZO1Q92508 2521 aa13.45□□□□□ -0.26
LDLRAP1-201ENST00000374338 NPYP01303 97 aa13.45□□□□□ -0.26
LDLRAP1-201ENST00000374338 LYZL1Q6UWQ5 148 aa13.45□□□□□ -0.26
LDLRAP1-201ENST00000374338 CCDC179H3BU77 68 aa13.44□□□□□ -0.26
LDLRAP1-201ENST00000374338 PRSS1P07477 247 aa13.44□□□□□ -0.26
LDLRAP1-201ENST00000374338 RASL11BQ9BPW5 248 aa13.44□□□□□ -0.26
LDLRAP1-201ENST00000374338 USP9YO00507 2555 aaPredicted RBP13.44□□□□□ -0.26
LDLRAP1-201ENST00000374338 TMEM158Q8WZ71 300 aa13.44□□□□□ -0.26
LDLRAP1-201ENST00000374338 DLX4Q92988 240 aaPredicted RBP13.44□□□□□ -0.26
LDLRAP1-201ENST00000374338 IGHV3OR16-10A0A075B7F0 116 aa13.43□□□□□ -0.26
LDLRAP1-201ENST00000374338 GAGE12JA6NER3 117 aa13.43□□□□□ -0.26
LDLRAP1-201ENST00000374338 GAGE7O76087 117 aa13.43□□□□□ -0.26
LDLRAP1-201ENST00000374338 GAGE12FP0CL80 117 aa13.43□□□□□ -0.26
LDLRAP1-201ENST00000374338 GAGE12GP0CL81 117 aa13.43□□□□□ -0.26
LDLRAP1-201ENST00000374338 GAGE12IP0CL82 117 aa13.43□□□□□ -0.26
LDLRAP1-201ENST00000374338 GAGE4Q13068 117 aa13.43□□□□□ -0.26
LDLRAP1-201ENST00000374338 CITED1Q99966 193 aa13.43□□□□□ -0.26
LDLRAP1-201ENST00000374338 IGKV1-17P01599 117 aa13.43□□□□□ -0.26
LDLRAP1-201ENST00000374338 HLA-DRB4P13762 266 aa13.43□□□□□ -0.26
LDLRAP1-201ENST00000374338 ZFP36P26651 326 aaKnown RBP13.43□□□□□ -0.26
LDLRAP1-201ENST00000374338 SFTA2Q6UW10 78 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms