RNA–Protein interactions for RNA: ENST00000373779.7

PTPRU-202, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-202ENST00000373779 TRGV2A0A075B6R0 118 aa13.7□□□□□ -0.22
PTPRU-202ENST00000373779 F8VRH5 84 aa13.7□□□□□ -0.22
PTPRU-202ENST00000373779 K7ERJ3 54 aa13.7□□□□□ -0.22
PTPRU-202ENST00000373779 HLA-DRB4P13762 266 aa13.7□□□□□ -0.22
PTPRU-202ENST00000373779 HLA-DRB4X5D2U9 266 aa13.7□□□□□ -0.22
PTPRU-202ENST00000373779 F8W1H4 67 aa13.69□□□□□ -0.22
PTPRU-202ENST00000373779 NDUFS8O00217 210 aa13.69□□□□□ -0.22
PTPRU-202ENST00000373779 TAL2Q16559 108 aa13.69□□□□□ -0.22
PTPRU-202ENST00000373779 PCP2Q8IVA1 136 aa13.69□□□□□ -0.22
PTPRU-202ENST00000373779 ANXA2RQ3ZCQ2 193 aa13.69□□□□□ -0.22
PTPRU-202ENST00000373779 TMEM141Q96I45 108 aa13.69□□□□□ -0.22
PTPRU-202ENST00000373779 MALRD1Q5VYJ5 2156 aa13.69□□□□□ -0.22
PTPRU-202ENST00000373779 IGLV2-8P01709 118 aa13.69□□□□□ -0.22
PTPRU-202ENST00000373779 CKS1BP61024 79 aa13.69□□□□□ -0.22
PTPRU-202ENST00000373779 NPC2P61916 151 aa13.69□□□□□ -0.22
PTPRU-202ENST00000373779 ABCA1O95477 2261 aa13.69□□□□□ -0.22
PTPRU-202ENST00000373779 TRBV7-9A0A0J9YWB2 115 aa13.69□□□□□ -0.22
PTPRU-202ENST00000373779 ATXN8Q156A1 80 aa13.69□□□□□ -0.22
PTPRU-202ENST00000373779 WISP2O76076 250 aa13.68□□□□□ -0.22
PTPRU-202ENST00000373779 PMVKQ15126 192 aa13.68□□□□□ -0.22
PTPRU-202ENST00000373779 ZFAND6Q6FIF0 208 aa13.68□□□□□ -0.22
PTPRU-202ENST00000373779 CFHR4Q92496 578 aa13.68□□□□□ -0.22
PTPRU-202ENST00000373779 PCNX1Q96RV3 2341 aa13.68□□□□□ -0.22
PTPRU-202ENST00000373779 A0A087WX48 190 aa13.68□□□□□ -0.22
PTPRU-202ENST00000373779 ANKRD39Q53RE8 183 aa13.68□□□□□ -0.22
PTPRU-202ENST00000373779 TRPT1Q86TN4 253 aaKnown RBP13.68□□□□□ -0.22
PTPRU-202ENST00000373779 PTPRSQ13332 1948 aa13.68□□□□□ -0.22
PTPRU-202ENST00000373779 A0A0U1RRA0 63 aa13.67□□□□□ -0.22
PTPRU-202ENST00000373779 OR11H6Q8NGC7 330 aa13.67□□□□□ -0.22
PTPRU-202ENST00000373779 PRADC1Q9BSG0 188 aa13.67□□□□□ -0.22
PTPRU-202ENST00000373779 B4DSR2 109 aa13.67□□□□□ -0.22
PTPRU-202ENST00000373779 CGB3P0DN86 165 aa13.67□□□□□ -0.22
PTPRU-202ENST00000373779 CGB7P0DN87 165 aa13.67□□□□□ -0.22
PTPRU-202ENST00000373779 A0A1W2PRX2 142 aa13.67□□□□□ -0.22
PTPRU-202ENST00000373779 NDUFA4O00483 81 aa13.67□□□□□ -0.22
PTPRU-202ENST00000373779 TEX22C9J3V5 150 aa13.67□□□□□ -0.22
PTPRU-202ENST00000373779 ZNF415Q09FC8 603 aa13.67□□□□□ -0.22
PTPRU-202ENST00000373779 TMEM95Q3KNT9 176 aa13.67□□□□□ -0.22
PTPRU-202ENST00000373779 ETDBQ3ZM63 59 aa13.67□□□□□ -0.22
PTPRU-202ENST00000373779 TIMM21Q9BVV7 248 aa13.67□□□□□ -0.22
PTPRU-202ENST00000373779 RBAKDNA6NC62 111 aa13.66□□□□□ -0.22
PTPRU-202ENST00000373779 TSSC4Q9Y5U2 329 aaPredicted RBP13.66□□□□□ -0.22
PTPRU-202ENST00000373779 GAGE2BQ13066 116 aa13.66□□□□□ -0.22
PTPRU-202ENST00000373779 GAGE2EQ4V326 116 aa13.66□□□□□ -0.22
PTPRU-202ENST00000373779 UTF1Q5T230 341 aa13.66□□□□□ -0.22
PTPRU-202ENST00000373779 NPBQ8NG41 125 aa13.66□□□□□ -0.22
PTPRU-202ENST00000373779 AGPAT4-IT1Q9H0P7 198 aa13.66□□□□□ -0.22
PTPRU-202ENST00000373779 GAGE2DQ9UEU5 116 aa13.66□□□□□ -0.22
PTPRU-202ENST00000373779 MED12LQ86YW9 2145 aa13.66□□□□□ -0.22
PTPRU-202ENST00000373779 IGKV1D-37A0A075B6S9 117 aa13.66□□□□□ -0.22
PTPRU-202ENST00000373779 C19orf71A6NCJ1 209 aa13.66□□□□□ -0.22
PTPRU-202ENST00000373779 DSCR9P59020 149 aa13.66□□□□□ -0.22
PTPRU-202ENST00000373779 MORN3Q6PF18 240 aaPredicted RBP13.66□□□□□ -0.22
PTPRU-202ENST00000373779 IGHV1-69DA0A0B4J2H0 117 aa13.65□□□□□ -0.22
PTPRU-202ENST00000373779 IGHV1-69P01742 117 aa13.65□□□□□ -0.22
PTPRU-202ENST00000373779 C20orf78Q9BR46 151 aa13.65□□□□□ -0.22
PTPRU-202ENST00000373779 C1orf229Q6ZS94 237 aaPredicted RBP13.65□□□□□ -0.22
PTPRU-202ENST00000373779 IGFBPL1Q8WX77 278 aa13.65□□□□□ -0.22
PTPRU-202ENST00000373779 SPXQ9BT56 116 aa13.65□□□□□ -0.22
PTPRU-202ENST00000373779 LRP4O75096 1905 aa13.65□□□□□ -0.22
PTPRU-202ENST00000373779 IGLV11-55A0A075B6I3 123 aa13.65□□□□□ -0.22
PTPRU-202ENST00000373779 SPINK8P0C7L1 97 aa13.65□□□□□ -0.22
PTPRU-202ENST00000373779 PIP4P2Q8N4L2 257 aa13.65□□□□□ -0.22
PTPRU-202ENST00000373779 DAZAP2Q15038 168 aaPredicted RBP13.64□□□□□ -0.23
PTPRU-202ENST00000373779 C9JAW5 83 aa13.64□□□□□ -0.23
PTPRU-202ENST00000373779 GATA1P15976 413 aaPredicted RBP13.64□□□□□ -0.23
PTPRU-202ENST00000373779 NEGR1Q7Z3B1 354 aa13.64□□□□□ -0.23
PTPRU-202ENST00000373779 RNASE8Q8TDE3 154 aaKnown RBP13.64□□□□□ -0.23
PTPRU-202ENST00000373779 A0A1B0GXF2 115 aa13.64□□□□□ -0.23
PTPRU-202ENST00000373779 SDHAF1A6NFY7 115 aa13.64□□□□□ -0.23
PTPRU-202ENST00000373779 C2orf70A6NJV1 201 aa13.64□□□□□ -0.23
PTPRU-202ENST00000373779 HOXB4P17483 251 aaPredicted RBP13.64□□□□□ -0.23
PTPRU-202ENST00000373779 GNLYP22749 145 aa13.64□□□□□ -0.23
PTPRU-202ENST00000373779 RBMY1BA6NDE4 496 aaKnown RBP13.64□□□□□ -0.23
PTPRU-202ENST00000373779 RBMY1EA6NEQ0 496 aaKnown RBP13.64□□□□□ -0.23
PTPRU-202ENST00000373779 RBMY1DP0C7P1 496 aaKnown RBP13.64□□□□□ -0.23
PTPRU-202ENST00000373779 RBMY1A1P0DJD3 496 aaKnown RBP13.64□□□□□ -0.23
PTPRU-202ENST00000373779 RBMY1CP0DJD4 496 aa13.64□□□□□ -0.23
PTPRU-202ENST00000373779 C2orf82Q6UX34 121 aa13.64□□□□□ -0.23
PTPRU-202ENST00000373779 C1orf122Q6ZSJ8 110 aa13.64□□□□□ -0.23
PTPRU-202ENST00000373779 TAX1BP3O14907 124 aa13.64□□□□□ -0.23
PTPRU-202ENST00000373779 CRYGCP07315 174 aa13.64□□□□□ -0.23
PTPRU-202ENST00000373779 LY6G5BQ8NDX9 201 aa13.64□□□□□ -0.23
PTPRU-202ENST00000373779 MRPL53Q96EL3 112 aaKnown RBP13.64□□□□□ -0.23
PTPRU-202ENST00000373779 FOXE3Q13461 319 aa13.63□□□□□ -0.23
PTPRU-202ENST00000373779 PCNX2A6NKB5 2137 aa13.63□□□□□ -0.23
PTPRU-202ENST00000373779 TP53TG3Q9ULZ0 132 aa13.63□□□□□ -0.23
PTPRU-202ENST00000373779 LINC00574Q9H8X3 128 aa13.63□□□□□ -0.23
PTPRU-202ENST00000373779 TRBV20-1A0A075B6N2 111 aa13.63□□□□□ -0.23
PTPRU-202ENST00000373779 WI2-2373I1.2A0A1W2PRP0 233 aa13.63□□□□□ -0.23
PTPRU-202ENST00000373779 H3BMG7 143 aa13.63□□□□□ -0.23
PTPRU-202ENST00000373779 C12orf74Q32Q52 190 aa13.63□□□□□ -0.23
PTPRU-202ENST00000373779 CACNA1HO95180 2353 aa13.62□□□□□ -0.23
PTPRU-202ENST00000373779 TRBV6-1A0A0K0K1D8 114 aa13.62□□□□□ -0.23
PTPRU-202ENST00000373779 ADARB2-AS1A8MUL3 147 aa13.62□□□□□ -0.23
PTPRU-202ENST00000373779 IGLV1-47P01700 117 aa13.62□□□□□ -0.23
PTPRU-202ENST00000373779 MSRB1Q9NZV6 116 aa13.62□□□□□ -0.23
PTPRU-202ENST00000373779 GDF5OSQ5U4N7 250 aa13.62□□□□□ -0.23
PTPRU-202ENST00000373779 COL6A6A6NMZ7 2263 aa13.62□□□□□ -0.23
PTPRU-202ENST00000373779 SYNJ2BPP57105 145 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms