RNA–Protein interactions for RNA: ENST00000371122.8

SMARCA1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCA1, Length 4,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-202ENST00000371122 DEFB131AP59861 70 aa7.21□□□□□ -1.26
SMARCA1-202ENST00000371122 NUTF2P61970 127 aaKnown RBP7.21□□□□□ -1.26
SMARCA1-202ENST00000371122 BLCAPP62952 87 aa7.21□□□□□ -1.26
SMARCA1-202ENST00000371122 ZNF124Q15973 351 aa7.21□□□□□ -1.26
SMARCA1-202ENST00000371122 HIST2H2BDQ6DRA6 164 aa7.21□□□□□ -1.26
SMARCA1-202ENST00000371122 XCL2Q9UBD3 114 aa7.21□□□□□ -1.26
SMARCA1-202ENST00000371122 SOX21Q9Y651 276 aaPredicted RBP7.21□□□□□ -1.26
SMARCA1-202ENST00000371122 ATRQ13535 2644 aa7.21□□□□□ -1.26
SMARCA1-202ENST00000371122 DPM2O94777 84 aa7.21□□□□□ -1.26
SMARCA1-202ENST00000371122 IGHV2-70P01814 119 aa7.21□□□□□ -1.26
SMARCA1-202ENST00000371122 DEFB136Q30KP8 78 aa7.21□□□□□ -1.26
SMARCA1-202ENST00000371122 PATE2Q6UY27 113 aa7.21□□□□□ -1.26
SMARCA1-202ENST00000371122 IGHV4-39P01824 125 aa7.2□□□□□ -1.26
SMARCA1-202ENST00000371122 IGLL1P15814 213 aa7.2□□□□□ -1.26
SMARCA1-202ENST00000371122 SRSF1Q07955 248 aaKnown RBP eCLIP7.2□□□□□ -1.26
SMARCA1-202ENST00000371122 STHQ8IWL8 128 aa7.2□□□□□ -1.26
SMARCA1-202ENST00000371122 DMXL2Q8TDJ6 3036 aa7.2□□□□□ -1.26
SMARCA1-202ENST00000371122 TNRC6AQ8NDV7 1962 aaKnown RBP7.2□□□□□ -1.26
SMARCA1-202ENST00000371122 B4DSR2 109 aa7.2□□□□□ -1.26
SMARCA1-202ENST00000371122 KLHL30-AS1Q8NEE0 82 aa7.2□□□□□ -1.26
SMARCA1-202ENST00000371122 IGKCP01834 107 aa7.2□□□□□ -1.26
SMARCA1-202ENST00000371122 NPSP0C0P6 89 aa7.2□□□□□ -1.26
SMARCA1-202ENST00000371122 RNASE13Q5GAN3 156 aaKnown RBP7.2□□□□□ -1.26
SMARCA1-202ENST00000371122 LYRM7Q5U5X0 104 aa7.2□□□□□ -1.26
SMARCA1-202ENST00000371122 ZNF491Q8N8L2 437 aa7.2□□□□□ -1.26
SMARCA1-202ENST00000371122 BEND2Q8NDZ0 799 aa7.2□□□□□ -1.26
SMARCA1-202ENST00000371122 CSTL1Q9H114 145 aa7.2□□□□□ -1.26
SMARCA1-202ENST00000371122 PET117Q6UWS5 81 aa7.19□□□□□ -1.26
SMARCA1-202ENST00000371122 ODF3L1Q8IXM7 274 aa7.19□□□□□ -1.26
SMARCA1-202ENST00000371122 OR2K2Q8NGT1 345 aa7.19□□□□□ -1.26
SMARCA1-202ENST00000371122 LYPD6BQ8NI32 183 aa7.19□□□□□ -1.26
SMARCA1-202ENST00000371122 CHTOPQ9Y3Y2 248 aaKnown RBP7.19□□□□□ -1.26
SMARCA1-202ENST00000371122 TRGV1A0A0A0MS02 117 aa7.19□□□□□ -1.26
SMARCA1-202ENST00000371122 IGHV3-38A0A0C4DH36 116 aa7.19□□□□□ -1.26
SMARCA1-202ENST00000371122 SAP30O75446 220 aa7.19□□□□□ -1.26
SMARCA1-202ENST00000371122 ATP5L2Q7Z4Y8 100 aa7.19□□□□□ -1.26
SMARCA1-202ENST00000371122 NXT2Q9NPJ8 142 aaKnown RBP7.19□□□□□ -1.26
SMARCA1-202ENST00000371122 TNFRSF6BO95407 300 aa7.19□□□□□ -1.26
SMARCA1-202ENST00000371122 CD28P10747 220 aa7.19□□□□□ -1.26
SMARCA1-202ENST00000371122 C1orf122Q6ZSJ8 110 aa7.19□□□□□ -1.26
SMARCA1-202ENST00000371122 TTTY13Q9BZ97 58 aa7.19□□□□□ -1.26
SMARCA1-202ENST00000371122 DLEU1O43261 78 aa7.18□□□□□ -1.26
SMARCA1-202ENST00000371122 NPYP01303 97 aa7.18□□□□□ -1.26
SMARCA1-202ENST00000371122 IGKV1-17P01599 117 aa7.18□□□□□ -1.26
SMARCA1-202ENST00000371122 ORAOV1Q8WV07 137 aa7.18□□□□□ -1.26
SMARCA1-202ENST00000371122 M0R1W7 72 aa7.18□□□□□ -1.26
SMARCA1-202ENST00000371122 COX6CP09669 75 aa7.18□□□□□ -1.26
SMARCA1-202ENST00000371122 FOXE3Q13461 319 aa7.18□□□□□ -1.26
SMARCA1-202ENST00000371122 MINOS1Q5TGZ0 78 aa7.18□□□□□ -1.26
SMARCA1-202ENST00000371122 C1orf159Q96HA4 380 aa7.18□□□□□ -1.26
SMARCA1-202ENST00000371122 PRR25Q96S07 402 aa7.18□□□□□ -1.26
SMARCA1-202ENST00000371122 MINOS1-NBL1R4GNA1 71 aa7.18□□□□□ -1.26
SMARCA1-202ENST00000371122 TRAV13-1A0A0B4J241 112 aa7.18□□□□□ -1.26
SMARCA1-202ENST00000371122 LHBP01229 141 aa7.18□□□□□ -1.26
SMARCA1-202ENST00000371122 MSMBP08118 114 aa7.17□□□□□ -1.26
SMARCA1-202ENST00000371122 DEFB130BP0DP73 79 aa7.17□□□□□ -1.26
SMARCA1-202ENST00000371122 DEFB130AP0DP74 79 aa7.17□□□□□ -1.26
SMARCA1-202ENST00000371122 SP5Q6BEB4 398 aaPredicted RBP7.17□□□□□ -1.26
SMARCA1-202ENST00000371122 C8orf86Q6ZUL3 223 aa7.17□□□□□ -1.26
SMARCA1-202ENST00000371122 ZNF295-AS1Q8N0V1 137 aa7.17□□□□□ -1.26
SMARCA1-202ENST00000371122 DYNAPQ8N1N2 210 aa7.17□□□□□ -1.26
SMARCA1-202ENST00000371122 CHCHD1Q96BP2 118 aaKnown RBP7.17□□□□□ -1.26
SMARCA1-202ENST00000371122 SPXQ9BT56 116 aa7.17□□□□□ -1.26
SMARCA1-202ENST00000371122 TP73-AS1Q9UF72 201 aa7.17□□□□□ -1.26
SMARCA1-202ENST00000371122 IGHV4-61A0A0C4DH41 118 aa7.17□□□□□ -1.26
SMARCA1-202ENST00000371122 LAGE3Q14657 143 aa7.17□□□□□ -1.26
SMARCA1-202ENST00000371122 MRPL51Q4U2R6 128 aaKnown RBP7.17□□□□□ -1.26
SMARCA1-202ENST00000371122 WIPF2Q8TF74 440 aaPredicted RBP7.17□□□□□ -1.26
SMARCA1-202ENST00000371122 NCKAP5O14513 1909 aa7.17□□□□□ -1.26
SMARCA1-202ENST00000371122 KRTAP27-1Q3LI81 207 aa7.17□□□□□ -1.26
SMARCA1-202ENST00000371122 TRGV4A0A0C4DH28 118 aa7.17□□□□□ -1.26
SMARCA1-202ENST00000371122 IGHV1-24A0A0C4DH33 117 aa7.17□□□□□ -1.26
SMARCA1-202ENST00000371122 GNRH2O43555 120 aa7.17□□□□□ -1.26
SMARCA1-202ENST00000371122 IGHV4-59P01825 116 aa7.17□□□□□ -1.26
SMARCA1-202ENST00000371122 IGHV4-38-2P0DP08 117 aa7.17□□□□□ -1.26
SMARCA1-202ENST00000371122 HOXB4P17483 251 aaPredicted RBP7.17□□□□□ -1.26
SMARCA1-202ENST00000371122 TDGF1P3P51864 188 aa7.17□□□□□ -1.26
SMARCA1-202ENST00000371122 UBE2E1P51965 193 aa7.17□□□□□ -1.26
SMARCA1-202ENST00000371122 Q5PR19 223 aa7.17□□□□□ -1.26
SMARCA1-202ENST00000371122 ZNF479Q96JC4 524 aa7.17□□□□□ -1.26
SMARCA1-202ENST00000371122 CHCHD5Q9BSY4 110 aa7.17□□□□□ -1.26
SMARCA1-202ENST00000371122 ITGB1BP1O14713 200 aa7.16□□□□□ -1.26
SMARCA1-202ENST00000371122 A0A1B0GW15 77 aa7.16□□□□□ -1.26
SMARCA1-202ENST00000371122 PPBPP02775 128 aa7.16□□□□□ -1.26
SMARCA1-202ENST00000371122 IGLC2P0DOY2 106 aa7.16□□□□□ -1.26
SMARCA1-202ENST00000371122 IGLC3P0DOY3 106 aa7.16□□□□□ -1.26
SMARCA1-202ENST00000371122 EGR2P11161 476 aaPredicted RBP7.16□□□□□ -1.26
SMARCA1-202ENST00000371122 SMAGPQ0VAQ4 97 aa7.16□□□□□ -1.26
SMARCA1-202ENST00000371122 ANXA2RQ3ZCQ2 193 aa7.16□□□□□ -1.26
SMARCA1-202ENST00000371122 Q8NA96 180 aa7.16□□□□□ -1.26
SMARCA1-202ENST00000371122 DKK2Q9UBU2 259 aa7.16□□□□□ -1.26
SMARCA1-202ENST00000371122 DSPP15924 2871 aaKnown RBP7.16□□□□□ -1.26
SMARCA1-202ENST00000371122 IGHV1-69DA0A0B4J2H0 117 aa7.16□□□□□ -1.26
SMARCA1-202ENST00000371122 ADARB2-AS1A8MUL3 147 aa7.16□□□□□ -1.26
SMARCA1-202ENST00000371122 IGHV1-69P01742 117 aa7.16□□□□□ -1.26
SMARCA1-202ENST00000371122 ZFP36P26651 326 aaKnown RBP7.16□□□□□ -1.26
SMARCA1-202ENST00000371122 LINC01548A6NM66 108 aa7.15□□□□□ -1.26
SMARCA1-202ENST00000371122 PRAC2D3DTV9 90 aa7.15□□□□□ -1.26
SMARCA1-202ENST00000371122 YPEL3P61236 119 aaPredicted RBP7.15□□□□□ -1.26
SMARCA1-202ENST00000371122 CIRBPQ14011 172 aaKnown RBP7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms