RNA–Protein interactions for RNA: ENST00000371121.4

SMARCA1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-201ENST00000371121 IL17RELQ6ZVW7 336 aa8.98□□□□□ -0.97
SMARCA1-201ENST00000371121 NXT2Q9NPJ8 142 aaKnown RBP8.98□□□□□ -0.97
SMARCA1-201ENST00000371121 MYMXA0A1B0GTQ4 84 aa8.98□□□□□ -0.97
SMARCA1-201ENST00000371121 FAM90A27PA6NNH2 459 aa8.98□□□□□ -0.97
SMARCA1-201ENST00000371121 J3QR89 54 aa8.98□□□□□ -0.97
SMARCA1-201ENST00000371121 LAMTOR5O43504 91 aa8.98□□□□□ -0.97
SMARCA1-201ENST00000371121 LPAL2Q16609 132 aa8.98□□□□□ -0.97
SMARCA1-201ENST00000371121 DYNAPQ8N1N2 210 aa8.98□□□□□ -0.97
SMARCA1-201ENST00000371121 FAM215AQ9Y5M1 114 aa8.98□□□□□ -0.97
SMARCA1-201ENST00000371121 IGHV1-3A0A0C4DH29 117 aa8.98□□□□□ -0.97
SMARCA1-201ENST00000371121 GFRALQ6UXV0 394 aa8.98□□□□□ -0.97
SMARCA1-201ENST00000371121 FDCSPQ8NFU4 85 aa8.98□□□□□ -0.97
SMARCA1-201ENST00000371121 ZDBF2Q9HCK1 2354 aa8.97□□□□□ -0.97
SMARCA1-201ENST00000371121 LINC01549A6NIU2 74 aa8.97□□□□□ -0.97
SMARCA1-201ENST00000371121 ATP5LO75964 103 aa8.97□□□□□ -0.97
SMARCA1-201ENST00000371121 PDE6HQ13956 83 aa8.97□□□□□ -0.97
SMARCA1-201ENST00000371121 AKAP9Q99996 3911 aa8.97□□□□□ -0.97
SMARCA1-201ENST00000371121 ROS1P08922 2347 aa8.97□□□□□ -0.97
SMARCA1-201ENST00000371121 TCL1BO95988 128 aa8.97□□□□□ -0.97
SMARCA1-201ENST00000371121 SRSF2Q01130 221 aaKnown RBP8.97□□□□□ -0.97
SMARCA1-201ENST00000371121 RASL10AQ92737 203 aa8.97□□□□□ -0.97
SMARCA1-201ENST00000371121 FANCD2OSQ96PS1 177 aa8.97□□□□□ -0.97
SMARCA1-201ENST00000371121 COL12A1Q99715 3063 aa8.97□□□□□ -0.97
SMARCA1-201ENST00000371121 SHISA2Q6UWI4 295 aa8.97□□□□□ -0.97
SMARCA1-201ENST00000371121 MSRB2Q9Y3D2 182 aa8.97□□□□□ -0.97
SMARCA1-201ENST00000371121 ARHGAP32A7KAX9 2087 aa8.97□□□□□ -0.97
SMARCA1-201ENST00000371121 GPR179Q6PRD1 2367 aa8.96□□□□□ -0.97
SMARCA1-201ENST00000371121 TMEM178BH3BS89 294 aa8.96□□□□□ -0.97
SMARCA1-201ENST00000371121 CRLF1O75462 422 aa8.96□□□□□ -0.97
SMARCA1-201ENST00000371121 LINC01559Q495D7 138 aa8.96□□□□□ -0.97
SMARCA1-201ENST00000371121 NEXN-AS1Q8NBZ9 246 aa8.96□□□□□ -0.97
SMARCA1-201ENST00000371121 MBD3L4A6NDZ8 208 aaPredicted RBP8.96□□□□□ -0.98
SMARCA1-201ENST00000371121 MBD3L3A6NE82 208 aaPredicted RBP8.96□□□□□ -0.98
SMARCA1-201ENST00000371121 MBD3L5A6NJ08 208 aaPredicted RBP8.96□□□□□ -0.98
SMARCA1-201ENST00000371121 CRIP2P52943 208 aaPredicted RBP8.96□□□□□ -0.98
SMARCA1-201ENST00000371121 MBD3L2Q8NHZ7 208 aaPredicted RBP8.96□□□□□ -0.98
SMARCA1-201ENST00000371121 CUL9Q8IWT3 2517 aa8.96□□□□□ -0.98
SMARCA1-201ENST00000371121 BRI3O95415 125 aa8.96□□□□□ -0.98
SMARCA1-201ENST00000371121 CRYGDP07320 174 aa8.96□□□□□ -0.98
SMARCA1-201ENST00000371121 HOXA3O43365 443 aaPredicted RBP8.95□□□□□ -0.98
SMARCA1-201ENST00000371121 ADIPOQQ15848 244 aa8.95□□□□□ -0.98
SMARCA1-201ENST00000371121 PSMG4Q5JS54 123 aa8.95□□□□□ -0.98
SMARCA1-201ENST00000371121 LY6LH3BQJ8 138 aa8.95□□□□□ -0.98
SMARCA1-201ENST00000371121 FAM27E3Q08E93 113 aa8.95□□□□□ -0.98
SMARCA1-201ENST00000371121 Q6ZS46 218 aa8.95□□□□□ -0.98
SMARCA1-201ENST00000371121 KLHL30-AS1Q8NEE0 82 aa8.94□□□□□ -0.98
SMARCA1-201ENST00000371121 DLX4Q92988 240 aaPredicted RBP8.94□□□□□ -0.98
SMARCA1-201ENST00000371121 F8VRH5 84 aa8.94□□□□□ -0.98
SMARCA1-201ENST00000371121 LAGE3Q14657 143 aa8.94□□□□□ -0.98
SMARCA1-201ENST00000371121 TEN1Q86WV5 123 aa8.94□□□□□ -0.98
SMARCA1-201ENST00000371121 RNF182Q8N6D2 247 aa8.94□□□□□ -0.98
SMARCA1-201ENST00000371121 SRSF8Q9BRL6 282 aaKnown RBP8.94□□□□□ -0.98
SMARCA1-201ENST00000371121 IGHV3OR16-8A0A075B7F1 116 aa8.94□□□□□ -0.98
SMARCA1-201ENST00000371121 BUB1B-PAK6H3BSN5 160 aa8.94□□□□□ -0.98
SMARCA1-201ENST00000371121 SPRY2O43597 315 aa8.94□□□□□ -0.98
SMARCA1-201ENST00000371121 ELANEP08246 267 aa8.94□□□□□ -0.98
SMARCA1-201ENST00000371121 PLNP26678 52 aa8.94□□□□□ -0.98
SMARCA1-201ENST00000371121 PSMB2P49721 201 aa8.94□□□□□ -0.98
SMARCA1-201ENST00000371121 C3orf36Q3SXR2 165 aa8.94□□□□□ -0.98
SMARCA1-201ENST00000371121 TRAV12-1A0A0B4J245 112 aa8.93□□□□□ -0.98
SMARCA1-201ENST00000371121 TSPEAR-AS2P59090 65 aa8.93□□□□□ -0.98
SMARCA1-201ENST00000371121 IGFL2Q6UWQ7 119 aa8.93□□□□□ -0.98
SMARCA1-201ENST00000371121 AMELXQ99217 191 aa8.93□□□□□ -0.98
SMARCA1-201ENST00000371121 C17orf100A8MU93 164 aa8.93□□□□□ -0.98
SMARCA1-201ENST00000371121 TSHBP01222 138 aa8.93□□□□□ -0.98
SMARCA1-201ENST00000371121 IGHV3-23P01764 117 aa8.93□□□□□ -0.98
SMARCA1-201ENST00000371121 ORM1P02763 201 aa8.93□□□□□ -0.98
SMARCA1-201ENST00000371121 TMEM78Q5T7P6 136 aa8.93□□□□□ -0.98
SMARCA1-201ENST00000371121 ANKRD29Q8N6D5 301 aa8.93□□□□□ -0.98
SMARCA1-201ENST00000371121 SRD5A1P18405 259 aa8.93□□□□□ -0.98
SMARCA1-201ENST00000371121 NDUFA11Q86Y39 141 aa8.93□□□□□ -0.98
SMARCA1-201ENST00000371121 C1orf210Q8IVY1 113 aa8.93□□□□□ -0.98
SMARCA1-201ENST00000371121 RPEQ96AT9 228 aa8.93□□□□□ -0.98
SMARCA1-201ENST00000371121 CFC1BP0CG36 223 aa8.92□□□□□ -0.98
SMARCA1-201ENST00000371121 CFC1P0CG37 223 aa8.92□□□□□ -0.98
SMARCA1-201ENST00000371121 NDPQ00604 133 aa8.92□□□□□ -0.98
SMARCA1-201ENST00000371121 ANXA2RQ3ZCQ2 193 aa8.92□□□□□ -0.98
SMARCA1-201ENST00000371121 PIP4P1Q86T03 277 aa8.92□□□□□ -0.98
SMARCA1-201ENST00000371121 IGLV11-55A0A075B6I3 123 aa8.92□□□□□ -0.98
SMARCA1-201ENST00000371121 B5MCH6 92 aa8.92□□□□□ -0.98
SMARCA1-201ENST00000371121 BAALCQ8WXS3 180 aa8.92□□□□□ -0.98
SMARCA1-201ENST00000371121 PRADC1Q9BSG0 188 aa8.92□□□□□ -0.98
SMARCA1-201ENST00000371121 PKDREJQ9NTG1 2253 aa8.92□□□□□ -0.98
SMARCA1-201ENST00000371121 PRR9Q5T870 116 aa8.92□□□□□ -0.98
SMARCA1-201ENST00000371121 TMEM190Q8WZ59 177 aa8.92□□□□□ -0.98
SMARCA1-201ENST00000371121 AAMDCQ9H7C9 122 aa8.92□□□□□ -0.98
SMARCA1-201ENST00000371121 UFC1Q9Y3C8 167 aa8.92□□□□□ -0.98
SMARCA1-201ENST00000371121 CUBNO60494 3623 aa8.92□□□□□ -0.98
SMARCA1-201ENST00000371121 IGLV4-69A0A075B6H9 119 aa8.91□□□□□ -0.98
SMARCA1-201ENST00000371121 TRAV4A0A0B4J268 109 aa8.91□□□□□ -0.98
SMARCA1-201ENST00000371121 A6NJY4 79 aa8.91□□□□□ -0.98
SMARCA1-201ENST00000371121 CCDC179H3BU77 68 aa8.91□□□□□ -0.98
SMARCA1-201ENST00000371121 NCOR1O75376 2440 aa8.91□□□□□ -0.98
SMARCA1-201ENST00000371121 TOMM6Q96B49 74 aa8.91□□□□□ -0.98
SMARCA1-201ENST00000371121 NCBP2LA6PVI3 153 aaKnown RBP8.91□□□□□ -0.98
SMARCA1-201ENST00000371121 H7C1H1 209 aa8.91□□□□□ -0.98
SMARCA1-201ENST00000371121 PPDPFLQ8WWR9 84 aa8.91□□□□□ -0.98
SMARCA1-201ENST00000371121 CCL17Q92583 94 aa8.91□□□□□ -0.98
SMARCA1-201ENST00000371121 CD59P13987 128 aa8.91□□□□□ -0.98
SMARCA1-201ENST00000371121 NUP37Q8NFH4 326 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 114 ms