RNA–Protein interactions for RNA: ENST00000371121.4

SMARCA1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,564 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-201ENST00000371121 IL17RELQ6ZVW7 336 aa8.98□□□□□ -0.97
SMARCA1-201ENST00000371121 NXT2Q9NPJ8 142 aaKnown RBP8.98□□□□□ -0.97
SMARCA1-201ENST00000371121 MYMXA0A1B0GTQ4 84 aa8.98□□□□□ -0.97
SMARCA1-201ENST00000371121 FAM90A27PA6NNH2 459 aa8.98□□□□□ -0.97
SMARCA1-201ENST00000371121 J3QR89 54 aa8.98□□□□□ -0.97
SMARCA1-201ENST00000371121 LAMTOR5O43504 91 aa8.98□□□□□ -0.97
SMARCA1-201ENST00000371121 LPAL2Q16609 132 aa8.98□□□□□ -0.97
SMARCA1-201ENST00000371121 DYNAPQ8N1N2 210 aa8.98□□□□□ -0.97
SMARCA1-201ENST00000371121 FAM215AQ9Y5M1 114 aa8.98□□□□□ -0.97
SMARCA1-201ENST00000371121 IGHV1-3A0A0C4DH29 117 aa8.98□□□□□ -0.97
SMARCA1-201ENST00000371121 GFRALQ6UXV0 394 aa8.98□□□□□ -0.97
SMARCA1-201ENST00000371121 FDCSPQ8NFU4 85 aa8.98□□□□□ -0.97
SMARCA1-201ENST00000371121 ZDBF2Q9HCK1 2354 aa8.97□□□□□ -0.97
SMARCA1-201ENST00000371121 LINC01549A6NIU2 74 aa8.97□□□□□ -0.97
SMARCA1-201ENST00000371121 ATP5LO75964 103 aa8.97□□□□□ -0.97
SMARCA1-201ENST00000371121 PDE6HQ13956 83 aa8.97□□□□□ -0.97
SMARCA1-201ENST00000371121 AKAP9Q99996 3911 aa8.97□□□□□ -0.97
SMARCA1-201ENST00000371121 ROS1P08922 2347 aa8.97□□□□□ -0.97
SMARCA1-201ENST00000371121 TCL1BO95988 128 aa8.97□□□□□ -0.97
SMARCA1-201ENST00000371121 SRSF2Q01130 221 aaKnown RBP8.97□□□□□ -0.97
SMARCA1-201ENST00000371121 RASL10AQ92737 203 aa8.97□□□□□ -0.97
SMARCA1-201ENST00000371121 FANCD2OSQ96PS1 177 aa8.97□□□□□ -0.97
SMARCA1-201ENST00000371121 COL12A1Q99715 3063 aa8.97□□□□□ -0.97
SMARCA1-201ENST00000371121 SHISA2Q6UWI4 295 aa8.97□□□□□ -0.97
SMARCA1-201ENST00000371121 MSRB2Q9Y3D2 182 aa8.97□□□□□ -0.97
SMARCA1-201ENST00000371121 ARHGAP32A7KAX9 2087 aa8.97□□□□□ -0.97
SMARCA1-201ENST00000371121 GPR179Q6PRD1 2367 aa8.96□□□□□ -0.97
SMARCA1-201ENST00000371121 TMEM178BH3BS89 294 aa8.96□□□□□ -0.97
SMARCA1-201ENST00000371121 CRLF1O75462 422 aa8.96□□□□□ -0.97
SMARCA1-201ENST00000371121 LINC01559Q495D7 138 aa8.96□□□□□ -0.97
SMARCA1-201ENST00000371121 NEXN-AS1Q8NBZ9 246 aa8.96□□□□□ -0.97
SMARCA1-201ENST00000371121 MBD3L4A6NDZ8 208 aaPredicted RBP8.96□□□□□ -0.98
SMARCA1-201ENST00000371121 MBD3L3A6NE82 208 aaPredicted RBP8.96□□□□□ -0.98
SMARCA1-201ENST00000371121 MBD3L5A6NJ08 208 aaPredicted RBP8.96□□□□□ -0.98
SMARCA1-201ENST00000371121 CRIP2P52943 208 aaPredicted RBP8.96□□□□□ -0.98
SMARCA1-201ENST00000371121 MBD3L2Q8NHZ7 208 aaPredicted RBP8.96□□□□□ -0.98
SMARCA1-201ENST00000371121 CUL9Q8IWT3 2517 aa8.96□□□□□ -0.98
SMARCA1-201ENST00000371121 BRI3O95415 125 aa8.96□□□□□ -0.98
SMARCA1-201ENST00000371121 CRYGDP07320 174 aa8.96□□□□□ -0.98
SMARCA1-201ENST00000371121 HOXA3O43365 443 aaPredicted RBP8.95□□□□□ -0.98
SMARCA1-201ENST00000371121 ADIPOQQ15848 244 aa8.95□□□□□ -0.98
SMARCA1-201ENST00000371121 PSMG4Q5JS54 123 aa8.95□□□□□ -0.98
SMARCA1-201ENST00000371121 LY6LH3BQJ8 138 aa8.95□□□□□ -0.98
SMARCA1-201ENST00000371121 FAM27E3Q08E93 113 aa8.95□□□□□ -0.98
SMARCA1-201ENST00000371121 Q6ZS46 218 aa8.95□□□□□ -0.98
SMARCA1-201ENST00000371121 KLHL30-AS1Q8NEE0 82 aa8.94□□□□□ -0.98
SMARCA1-201ENST00000371121 DLX4Q92988 240 aaPredicted RBP8.94□□□□□ -0.98
SMARCA1-201ENST00000371121 F8VRH5 84 aa8.94□□□□□ -0.98
SMARCA1-201ENST00000371121 LAGE3Q14657 143 aa8.94□□□□□ -0.98
SMARCA1-201ENST00000371121 TEN1Q86WV5 123 aa8.94□□□□□ -0.98
SMARCA1-201ENST00000371121 RNF182Q8N6D2 247 aa8.94□□□□□ -0.98
SMARCA1-201ENST00000371121 SRSF8Q9BRL6 282 aaKnown RBP8.94□□□□□ -0.98
SMARCA1-201ENST00000371121 IGHV3OR16-8A0A075B7F1 116 aa8.94□□□□□ -0.98
SMARCA1-201ENST00000371121 BUB1B-PAK6H3BSN5 160 aa8.94□□□□□ -0.98
SMARCA1-201ENST00000371121 SPRY2O43597 315 aa8.94□□□□□ -0.98
SMARCA1-201ENST00000371121 ELANEP08246 267 aa8.94□□□□□ -0.98
SMARCA1-201ENST00000371121 PLNP26678 52 aa8.94□□□□□ -0.98
SMARCA1-201ENST00000371121 PSMB2P49721 201 aa8.94□□□□□ -0.98
SMARCA1-201ENST00000371121 C3orf36Q3SXR2 165 aa8.94□□□□□ -0.98
SMARCA1-201ENST00000371121 TRAV12-1A0A0B4J245 112 aa8.93□□□□□ -0.98
SMARCA1-201ENST00000371121 TSPEAR-AS2P59090 65 aa8.93□□□□□ -0.98
SMARCA1-201ENST00000371121 IGFL2Q6UWQ7 119 aa8.93□□□□□ -0.98
SMARCA1-201ENST00000371121 AMELXQ99217 191 aa8.93□□□□□ -0.98
SMARCA1-201ENST00000371121 C17orf100A8MU93 164 aa8.93□□□□□ -0.98
SMARCA1-201ENST00000371121 TSHBP01222 138 aa8.93□□□□□ -0.98
SMARCA1-201ENST00000371121 IGHV3-23P01764 117 aa8.93□□□□□ -0.98
SMARCA1-201ENST00000371121 ORM1P02763 201 aa8.93□□□□□ -0.98
SMARCA1-201ENST00000371121 TMEM78Q5T7P6 136 aa8.93□□□□□ -0.98
SMARCA1-201ENST00000371121 ANKRD29Q8N6D5 301 aa8.93□□□□□ -0.98
SMARCA1-201ENST00000371121 SRD5A1P18405 259 aa8.93□□□□□ -0.98
SMARCA1-201ENST00000371121 NDUFA11Q86Y39 141 aa8.93□□□□□ -0.98
SMARCA1-201ENST00000371121 C1orf210Q8IVY1 113 aa8.93□□□□□ -0.98
SMARCA1-201ENST00000371121 RPEQ96AT9 228 aa8.93□□□□□ -0.98
SMARCA1-201ENST00000371121 CFC1BP0CG36 223 aa8.92□□□□□ -0.98
SMARCA1-201ENST00000371121 CFC1P0CG37 223 aa8.92□□□□□ -0.98
SMARCA1-201ENST00000371121 NDPQ00604 133 aa8.92□□□□□ -0.98
SMARCA1-201ENST00000371121 ANXA2RQ3ZCQ2 193 aa8.92□□□□□ -0.98
SMARCA1-201ENST00000371121 PIP4P1Q86T03 277 aa8.92□□□□□ -0.98
SMARCA1-201ENST00000371121 IGLV11-55A0A075B6I3 123 aa8.92□□□□□ -0.98
SMARCA1-201ENST00000371121 B5MCH6 92 aa8.92□□□□□ -0.98
SMARCA1-201ENST00000371121 BAALCQ8WXS3 180 aa8.92□□□□□ -0.98
SMARCA1-201ENST00000371121 PRADC1Q9BSG0 188 aa8.92□□□□□ -0.98
SMARCA1-201ENST00000371121 PKDREJQ9NTG1 2253 aa8.92□□□□□ -0.98
SMARCA1-201ENST00000371121 PRR9Q5T870 116 aa8.92□□□□□ -0.98
SMARCA1-201ENST00000371121 TMEM190Q8WZ59 177 aa8.92□□□□□ -0.98
SMARCA1-201ENST00000371121 AAMDCQ9H7C9 122 aa8.92□□□□□ -0.98
SMARCA1-201ENST00000371121 UFC1Q9Y3C8 167 aa8.92□□□□□ -0.98
SMARCA1-201ENST00000371121 CUBNO60494 3623 aa8.92□□□□□ -0.98
SMARCA1-201ENST00000371121 IGLV4-69A0A075B6H9 119 aa8.91□□□□□ -0.98
SMARCA1-201ENST00000371121 TRAV4A0A0B4J268 109 aa8.91□□□□□ -0.98
SMARCA1-201ENST00000371121 A6NJY4 79 aa8.91□□□□□ -0.98
SMARCA1-201ENST00000371121 CCDC179H3BU77 68 aa8.91□□□□□ -0.98
SMARCA1-201ENST00000371121 NCOR1O75376 2440 aa8.91□□□□□ -0.98
SMARCA1-201ENST00000371121 TOMM6Q96B49 74 aa8.91□□□□□ -0.98
SMARCA1-201ENST00000371121 NCBP2LA6PVI3 153 aaKnown RBP8.91□□□□□ -0.98
SMARCA1-201ENST00000371121 H7C1H1 209 aa8.91□□□□□ -0.98
SMARCA1-201ENST00000371121 PPDPFLQ8WWR9 84 aa8.91□□□□□ -0.98
SMARCA1-201ENST00000371121 CCL17Q92583 94 aa8.91□□□□□ -0.98
SMARCA1-201ENST00000371121 CD59P13987 128 aa8.91□□□□□ -0.98
SMARCA1-201ENST00000371121 NUP37Q8NFH4 326 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 320.2 ms