RNA–Protein interactions for RNA: ENST00000370966.9

DEPDC1-201, Transcript of DEP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1, Length 4,586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-201ENST00000370966 ELANEP08246 267 aa9.36□□□□□ -0.91
DEPDC1-201ENST00000370966 CDPF1Q6NVV7 123 aa9.36□□□□□ -0.91
DEPDC1-201ENST00000370966 DLX4Q92988 240 aaPredicted RBP9.36□□□□□ -0.91
DEPDC1-201ENST00000370966 MRPL53Q96EL3 112 aaKnown RBP9.36□□□□□ -0.91
DEPDC1-201ENST00000370966 PRR14LQ5THK1 2151 aa9.36□□□□□ -0.91
DEPDC1-201ENST00000370966 MYMXA0A1B0GTQ4 84 aa9.36□□□□□ -0.91
DEPDC1-201ENST00000370966 IGLL1P15814 213 aa9.36□□□□□ -0.91
DEPDC1-201ENST00000370966 CDKN1BP46527 198 aa9.36□□□□□ -0.91
DEPDC1-201ENST00000370966 TCF15Q12870 199 aa9.36□□□□□ -0.91
DEPDC1-201ENST00000370966 SPINK13Q1W4C9 94 aa9.36□□□□□ -0.91
DEPDC1-201ENST00000370966 C1orf159Q96HA4 380 aa9.36□□□□□ -0.91
DEPDC1-201ENST00000370966 UBE2E2Q96LR5 201 aa9.36□□□□□ -0.91
DEPDC1-201ENST00000370966 VGLL1Q99990 258 aa9.36□□□□□ -0.91
DEPDC1-201ENST00000370966 SLC25A20O43772 301 aa9.35□□□□□ -0.91
DEPDC1-201ENST00000370966 IGKV1-17P01599 117 aa9.35□□□□□ -0.91
DEPDC1-201ENST00000370966 LINC00158P58513 81 aa9.35□□□□□ -0.91
DEPDC1-201ENST00000370966 ANXA2RQ3ZCQ2 193 aa9.35□□□□□ -0.91
DEPDC1-201ENST00000370966 TIMM21Q9BVV7 248 aa9.35□□□□□ -0.91
DEPDC1-201ENST00000370966 RNF114Q9Y508 228 aa9.35□□□□□ -0.91
DEPDC1-201ENST00000370966 LINC01619G3V211 115 aa9.35□□□□□ -0.91
DEPDC1-201ENST00000370966 NPBQ8NG41 125 aa9.35□□□□□ -0.91
DEPDC1-201ENST00000370966 SMIM2Q9BVW6 85 aa9.35□□□□□ -0.91
DEPDC1-201ENST00000370966 TP53TG1Q9Y2A0 90 aa9.35□□□□□ -0.91
DEPDC1-201ENST00000370966 TNCP24821 2201 aa9.35□□□□□ -0.91
DEPDC1-201ENST00000370966 IGHV7-4-1A0A0J9YVY3 117 aa9.34□□□□□ -0.91
DEPDC1-201ENST00000370966 GRNP28799 593 aaKnown RBP9.34□□□□□ -0.91
DEPDC1-201ENST00000370966 ATRXP46100 2492 aa9.34□□□□□ -0.91
DEPDC1-201ENST00000370966 CENPVL3A0A0U1RRI6 287 aa9.34□□□□□ -0.91
DEPDC1-201ENST00000370966 SDHAF1A6NFY7 115 aa9.34□□□□□ -0.91
DEPDC1-201ENST00000370966 I3L2K1 104 aa9.34□□□□□ -0.91
DEPDC1-201ENST00000370966 IGLV2-14P01704 120 aa9.34□□□□□ -0.91
DEPDC1-201ENST00000370966 CRPP02741 224 aa9.34□□□□□ -0.91
DEPDC1-201ENST00000370966 OCIAD2Q56VL3 154 aa9.34□□□□□ -0.91
DEPDC1-201ENST00000370966 TCTEX1D4Q5JR98 221 aa9.34□□□□□ -0.91
DEPDC1-201ENST00000370966 GTSF1LQ9H1H1 148 aa9.34□□□□□ -0.91
DEPDC1-201ENST00000370966 RBAKDNA6NC62 111 aa9.34□□□□□ -0.91
DEPDC1-201ENST00000370966 NDUFS7O75251 213 aa9.34□□□□□ -0.91
DEPDC1-201ENST00000370966 NPYP01303 97 aa9.34□□□□□ -0.91
DEPDC1-201ENST00000370966 COX8AP10176 69 aa9.34□□□□□ -0.91
DEPDC1-201ENST00000370966 SRSF2Q01130 221 aaKnown RBP9.34□□□□□ -0.91
DEPDC1-201ENST00000370966 PMVKQ15126 192 aa9.34□□□□□ -0.91
DEPDC1-201ENST00000370966 DEFB104AQ8WTQ1 72 aa9.34□□□□□ -0.91
DEPDC1-201ENST00000370966 K7EIM0 57 aa9.34□□□□□ -0.91
DEPDC1-201ENST00000370966 HOXB4P17483 251 aaPredicted RBP9.34□□□□□ -0.91
DEPDC1-201ENST00000370966 KLF5Q13887 457 aaPredicted RBP9.34□□□□□ -0.91
DEPDC1-201ENST00000370966 C11orf1Q9H5F2 150 aa9.34□□□□□ -0.91
DEPDC1-201ENST00000370966 GAGE12BA1L429 117 aa9.33□□□□□ -0.92
DEPDC1-201ENST00000370966 IGHV3-53P01767 116 aa9.33□□□□□ -0.92
DEPDC1-201ENST00000370966 GP9P14770 177 aa9.33□□□□□ -0.92
DEPDC1-201ENST00000370966 C17orf77Q96MU5 243 aa9.33□□□□□ -0.92
DEPDC1-201ENST00000370966 C20orf78Q9BR46 151 aa9.33□□□□□ -0.92
DEPDC1-201ENST00000370966 RPL35AP18077 110 aaKnown RBP9.33□□□□□ -0.92
DEPDC1-201ENST00000370966 CKS1BP61024 79 aa9.33□□□□□ -0.92
DEPDC1-201ENST00000370966 NEGR1Q7Z3B1 354 aa9.33□□□□□ -0.92
DEPDC1-201ENST00000370966 CST9LQ9H4G1 147 aa9.33□□□□□ -0.92
DEPDC1-201ENST00000370966 PGPEP1Q9NXJ5 209 aa9.33□□□□□ -0.92
DEPDC1-201ENST00000370966 PIEZO1Q92508 2521 aa9.33□□□□□ -0.92
DEPDC1-201ENST00000370966 IGLV1-47P01700 117 aa9.33□□□□□ -0.92
DEPDC1-201ENST00000370966 AGPAT4-IT1Q9H0P7 198 aa9.33□□□□□ -0.92
DEPDC1-201ENST00000370966 PCNX3Q9H6A9 2034 aa9.33□□□□□ -0.92
DEPDC1-201ENST00000370966 I3L3M4 83 aa9.32□□□□□ -0.92
DEPDC1-201ENST00000370966 FAM120AOSQ5T036 256 aa9.32□□□□□ -0.92
DEPDC1-201ENST00000370966 PATE2Q6UY27 113 aa9.32□□□□□ -0.92
DEPDC1-201ENST00000370966 SPXQ9BT56 116 aa9.32□□□□□ -0.92
DEPDC1-201ENST00000370966 TMEM131Q92545 1883 aa9.32□□□□□ -0.92
DEPDC1-201ENST00000370966 IGLV11-55A0A075B6I3 123 aa9.32□□□□□ -0.92
DEPDC1-201ENST00000370966 F8VRH5 84 aa9.32□□□□□ -0.92
DEPDC1-201ENST00000370966 DPH3Q96FX2 82 aa9.32□□□□□ -0.92
DEPDC1-201ENST00000370966 ATP6V0BQ99437 205 aa9.32□□□□□ -0.92
DEPDC1-201ENST00000370966 PHLDA1Q8WV24 401 aaPredicted RBP9.32□□□□□ -0.92
DEPDC1-201ENST00000370966 IGFBPL1Q8WX77 278 aa9.32□□□□□ -0.92
DEPDC1-201ENST00000370966 FAM167A-AS1Q96KT0 104 aa9.32□□□□□ -0.92
DEPDC1-201ENST00000370966 IGHV7-81A0A0B4J1V7 117 aa9.31□□□□□ -0.92
DEPDC1-201ENST00000370966 PRIMA1Q86XR5 153 aa9.31□□□□□ -0.92
DEPDC1-201ENST00000370966 XCL2Q9UBD3 114 aa9.31□□□□□ -0.92
DEPDC1-201ENST00000370966 TRAV13-1A0A0B4J241 112 aa9.31□□□□□ -0.92
DEPDC1-201ENST00000370966 K7EMI3 77 aa9.31□□□□□ -0.92
DEPDC1-201ENST00000370966 EGR2P11161 476 aaPredicted RBP9.31□□□□□ -0.92
DEPDC1-201ENST00000370966 C6orf226Q5I0X4 101 aa9.31□□□□□ -0.92
DEPDC1-201ENST00000370966 DYNAPQ8N1N2 210 aa9.31□□□□□ -0.92
DEPDC1-201ENST00000370966 MAPK1IP1LQ8NDC0 245 aa9.31□□□□□ -0.92
DEPDC1-201ENST00000370966 WNK1Q9H4A3 2382 aa9.31□□□□□ -0.92
DEPDC1-201ENST00000370966 PAX4O43316 350 aa9.31□□□□□ -0.92
DEPDC1-201ENST00000370966 FBXL19-AS1Q494R0 122 aa9.31□□□□□ -0.92
DEPDC1-201ENST00000370966 KIAA1549LQ6ZVL6 1849 aa9.3□□□□□ -0.92
DEPDC1-201ENST00000370966 KNCNA6PVL3 124 aa9.3□□□□□ -0.92
DEPDC1-201ENST00000370966 ODF3L1Q8IXM7 274 aa9.3□□□□□ -0.92
DEPDC1-201ENST00000370966 ZNF747Q9BV97 191 aa9.3□□□□□ -0.92
DEPDC1-201ENST00000370966 DENND4AQ7Z401 1863 aa9.3□□□□□ -0.92
DEPDC1-201ENST00000370966 MED12LQ86YW9 2145 aa9.3□□□□□ -0.92
DEPDC1-201ENST00000370966 TRAV8-4A0A0B4J246 113 aa9.3□□□□□ -0.92
DEPDC1-201ENST00000370966 P0C879 139 aa9.3□□□□□ -0.92
DEPDC1-201ENST00000370966 MSMPQ1L6U9 139 aa9.3□□□□□ -0.92
DEPDC1-201ENST00000370966 TMEM95Q3KNT9 176 aa9.3□□□□□ -0.92
DEPDC1-201ENST00000370966 ANAPC13Q9BS18 74 aa9.3□□□□□ -0.92
DEPDC1-201ENST00000370966 MRPL35Q9NZE8 188 aaKnown RBP9.3□□□□□ -0.92
DEPDC1-201ENST00000370966 KLK9Q9UKQ9 250 aa9.3□□□□□ -0.92
DEPDC1-201ENST00000370966 DYSFO75923 2080 aa9.3□□□□□ -0.92
DEPDC1-201ENST00000370966 HLA-DRB4P13762 266 aa9.3□□□□□ -0.92
DEPDC1-201ENST00000370966 HLA-DRB4X5D2U9 266 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms