RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 LRP1BQ9NZR2 4599 aa9.46□□□□□ -0.89
TNFRSF1A-202ENST00000366159 OR7C2O60412 319 aa9.46□□□□□ -0.9
TNFRSF1A-202ENST00000366159 RANP62826 216 aaKnown RBP9.46□□□□□ -0.9
TNFRSF1A-202ENST00000366159 SMIM3Q9BZL3 60 aa9.46□□□□□ -0.9
TNFRSF1A-202ENST00000366159 Q9H8V8 135 aa9.46□□□□□ -0.9
TNFRSF1A-202ENST00000366159 IGHV1OR15-1A0A075B7D0 117 aa9.45□□□□□ -0.9
TNFRSF1A-202ENST00000366159 A0A096LPF7 62 aa9.45□□□□□ -0.9
TNFRSF1A-202ENST00000366159 IFNA5P01569 189 aa9.45□□□□□ -0.9
TNFRSF1A-202ENST00000366159 TNP2Q05952 138 aa9.45□□□□□ -0.9
TNFRSF1A-202ENST00000366159 ZNF266Q14584 549 aa9.45□□□□□ -0.9
TNFRSF1A-202ENST00000366159 KHDC3LQ587J8 217 aa9.45□□□□□ -0.9
TNFRSF1A-202ENST00000366159 C6orf223Q8N319 242 aa9.45□□□□□ -0.9
TNFRSF1A-202ENST00000366159 Q8TAT8 98 aa9.45□□□□□ -0.9
TNFRSF1A-202ENST00000366159 SCGB1C1Q8TD33 95 aa9.45□□□□□ -0.9
TNFRSF1A-202ENST00000366159 KRTAP1-5Q9BYS1 174 aa9.45□□□□□ -0.9
TNFRSF1A-202ENST00000366159 LENEPQ9Y5L5 61 aa9.45□□□□□ -0.9
TNFRSF1A-202ENST00000366159 TRGV1A0A0A0MS02 117 aa9.44□□□□□ -0.9
TNFRSF1A-202ENST00000366159 DIRC3C9JPN6 131 aa9.44□□□□□ -0.9
TNFRSF1A-202ENST00000366159 TAS2R45P59539 299 aa9.44□□□□□ -0.9
TNFRSF1A-202ENST00000366159 UBE2L3P68036 154 aaKnown RBP9.44□□□□□ -0.9
TNFRSF1A-202ENST00000366159 Q6AWC8 147 aa9.44□□□□□ -0.9
TNFRSF1A-202ENST00000366159 LINC00528Q8N1L1 170 aa9.44□□□□□ -0.9
TNFRSF1A-202ENST00000366159 TMED6Q8WW62 240 aa9.44□□□□□ -0.9
TNFRSF1A-202ENST00000366159 ALG5Q9Y673 324 aa9.44□□□□□ -0.9
TNFRSF1A-202ENST00000366159 HSPG2P98160 4391 aa9.44□□□□□ -0.9
TNFRSF1A-202ENST00000366159 MUC4Q99102 2169 aa9.43□□□□□ -0.9
TNFRSF1A-202ENST00000366159 TRGV2A0A075B6R0 118 aa9.43□□□□□ -0.9
TNFRSF1A-202ENST00000366159 RGS13O14921 159 aa9.43□□□□□ -0.9
TNFRSF1A-202ENST00000366159 EIF3GO75821 320 aaKnown RBP eCLIP9.43□□□□□ -0.9
TNFRSF1A-202ENST00000366159 CSN1S1P47710 185 aa9.43□□□□□ -0.9
TNFRSF1A-202ENST00000366159 ARL6IP6Q8N6S5 226 aa9.43□□□□□ -0.9
TNFRSF1A-202ENST00000366159 ST6GAL2Q96JF0 529 aa9.43□□□□□ -0.9
TNFRSF1A-202ENST00000366159 MRPS16Q9Y3D3 137 aaKnown RBP9.43□□□□□ -0.9
TNFRSF1A-202ENST00000366159 DNAH5Q8TE73 4624 aa9.42□□□□□ -0.9
TNFRSF1A-202ENST00000366159 PQLC2Q6ZP29 291 aa9.42□□□□□ -0.9
TNFRSF1A-202ENST00000366159 OTORQ9NRC9 128 aa9.42□□□□□ -0.9
TNFRSF1A-202ENST00000366159 A0A1W2PPQ1 181 aa9.41□□□□□ -0.9
TNFRSF1A-202ENST00000366159 PGPA6NDG6 321 aa9.41□□□□□ -0.9
TNFRSF1A-202ENST00000366159 FHL2Q14192 279 aa9.41□□□□□ -0.9
TNFRSF1A-202ENST00000366159 ACOT6Q3I5F7 207 aaPredicted RBP9.41□□□□□ -0.9
TNFRSF1A-202ENST00000366159 TDRG1Q3Y452 100 aa9.41□□□□□ -0.9
TNFRSF1A-202ENST00000366159 ZNF575Q86XF7 245 aa9.41□□□□□ -0.9
TNFRSF1A-202ENST00000366159 SUN5Q8TC36 379 aa9.41□□□□□ -0.9
TNFRSF1A-202ENST00000366159 MDFICQ9P1T7 246 aa9.41□□□□□ -0.9
TNFRSF1A-202ENST00000366159 PTTG1O95997 202 aa9.4□□□□□ -0.9
TNFRSF1A-202ENST00000366159 RAB2AP61019 212 aa9.4□□□□□ -0.9
TNFRSF1A-202ENST00000366159 OR2G3Q8NGZ4 309 aa9.4□□□□□ -0.9
TNFRSF1A-202ENST00000366159 RASL10AQ92737 203 aa9.4□□□□□ -0.9
TNFRSF1A-202ENST00000366159 TVP23CQ96ET8 276 aa9.4□□□□□ -0.9
TNFRSF1A-202ENST00000366159 AQP10Q96PS8 301 aa9.4□□□□□ -0.9
TNFRSF1A-202ENST00000366159 MRPL16Q9NX20 251 aaKnown RBP9.4□□□□□ -0.9
TNFRSF1A-202ENST00000366159 APOBP04114 4563 aaKnown RBP9.4□□□□□ -0.91
TNFRSF1A-202ENST00000366159 STAG3L2P0CL84 134 aa9.39□□□□□ -0.91
TNFRSF1A-202ENST00000366159 STAG3L3P0CL85 134 aa9.39□□□□□ -0.91
TNFRSF1A-202ENST00000366159 BTF3P20290 206 aaKnown RBP9.39□□□□□ -0.91
TNFRSF1A-202ENST00000366159 CRYBA4P53673 196 aa9.39□□□□□ -0.91
TNFRSF1A-202ENST00000366159 ZNF415Q09FC8 603 aa9.39□□□□□ -0.91
TNFRSF1A-202ENST00000366159 MUC21Q5SSG8 566 aa9.39□□□□□ -0.91
TNFRSF1A-202ENST00000366159 IQCF2Q8IXL9 164 aa9.39□□□□□ -0.91
TNFRSF1A-202ENST00000366159 OR10G4Q8NGN3 311 aa9.39□□□□□ -0.91
TNFRSF1A-202ENST00000366159 OR10G9Q8NGN4 311 aa9.39□□□□□ -0.91
TNFRSF1A-202ENST00000366159 OR10G7Q8NGN6 311 aa9.39□□□□□ -0.91
TNFRSF1A-202ENST00000366159 HYLS1Q96M11 299 aa9.39□□□□□ -0.91
TNFRSF1A-202ENST00000366159 ARPC5LQ9BPX5 153 aa9.39□□□□□ -0.91
TNFRSF1A-202ENST00000366159 PRO0255Q9UI72 69 aa9.39□□□□□ -0.91
TNFRSF1A-202ENST00000366159 A0A1W2PPV4 95 aa9.38□□□□□ -0.91
TNFRSF1A-202ENST00000366159 Q5BKY6 102 aa9.38□□□□□ -0.91
TNFRSF1A-202ENST00000366159 TTC32Q5I0X7 151 aa9.38□□□□□ -0.91
TNFRSF1A-202ENST00000366159 PSMG3Q9BT73 122 aaPredicted RBP9.38□□□□□ -0.91
TNFRSF1A-202ENST00000366159 HHLA3Q9XRX5 114 aa9.38□□□□□ -0.91
TNFRSF1A-202ENST00000366159 HMGB3O15347 200 aaKnown RBP9.37□□□□□ -0.91
TNFRSF1A-202ENST00000366159 PAX4O43316 350 aa9.37□□□□□ -0.91
TNFRSF1A-202ENST00000366159 IGHV3-53P01767 116 aa9.37□□□□□ -0.91
TNFRSF1A-202ENST00000366159 SLAQ13239 276 aa9.37□□□□□ -0.91
TNFRSF1A-202ENST00000366159 FAM74A1Q5RGS3 127 aa9.37□□□□□ -0.91
TNFRSF1A-202ENST00000366159 FAM159AQ6UWV7 190 aa9.37□□□□□ -0.91
TNFRSF1A-202ENST00000366159 GOLT1AQ6ZVE7 132 aa9.37□□□□□ -0.91
TNFRSF1A-202ENST00000366159 CMTM2Q8TAZ6 248 aa9.37□□□□□ -0.91
TNFRSF1A-202ENST00000366159 SPXQ9BT56 116 aa9.37□□□□□ -0.91
TNFRSF1A-202ENST00000366159 TRGV11A0A075B6L2 103 aa9.36□□□□□ -0.91
TNFRSF1A-202ENST00000366159 TRAV8-1A0A0A6YYK1 113 aa9.36□□□□□ -0.91
TNFRSF1A-202ENST00000366159 ARL14EPLP0DKL9 152 aa9.36□□□□□ -0.91
TNFRSF1A-202ENST00000366159 ATP6V0CP27449 155 aa9.36□□□□□ -0.91
TNFRSF1A-202ENST00000366159 CDC34P49427 236 aaPredicted RBP9.36□□□□□ -0.91
TNFRSF1A-202ENST00000366159 SERF2P84101 59 aa9.36□□□□□ -0.91
TNFRSF1A-202ENST00000366159 TMEM183BQ1AE95 376 aa9.36□□□□□ -0.91
TNFRSF1A-202ENST00000366159 LYPD5Q6UWN5 251 aa9.36□□□□□ -0.91
TNFRSF1A-202ENST00000366159 TMEM183AQ8IXX5 376 aa9.36□□□□□ -0.91
TNFRSF1A-202ENST00000366159 HSD17B11Q8NBQ5 300 aa9.36□□□□□ -0.91
TNFRSF1A-202ENST00000366159 ZNF479Q96JC4 524 aa9.36□□□□□ -0.91
TNFRSF1A-202ENST00000366159 MED28Q9H204 178 aa9.36□□□□□ -0.91
TNFRSF1A-202ENST00000366159 ICOSQ9Y6W8 199 aa9.36□□□□□ -0.91
TNFRSF1A-202ENST00000366159 IGHV3-16A0A0C4DH30 117 aa9.35□□□□□ -0.91
TNFRSF1A-202ENST00000366159 GNRH2O43555 120 aa9.35□□□□□ -0.91
TNFRSF1A-202ENST00000366159 SFTA3P0C7M3 94 aa9.35□□□□□ -0.91
TNFRSF1A-202ENST00000366159 GNG5P63218 68 aa9.35□□□□□ -0.91
TNFRSF1A-202ENST00000366159 Q6ZRN7 208 aaPredicted RBP9.35□□□□□ -0.91
TNFRSF1A-202ENST00000366159 ASB13Q8WXK3 278 aa9.35□□□□□ -0.91
TNFRSF1A-202ENST00000366159 RAB24Q969Q5 203 aa9.35□□□□□ -0.91
TNFRSF1A-202ENST00000366159 C8orf49Q96NF6 230 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms