RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 IGLV1-47P01700 117 aa12.88□□□□□ -0.35
SCAF1-201ENST00000360565 PF4P02776 101 aa12.88□□□□□ -0.35
SCAF1-201ENST00000360565 CD28P10747 220 aa12.87□□□□□ -0.35
SCAF1-201ENST00000360565 SYNJ2BPP57105 145 aa12.87□□□□□ -0.35
SCAF1-201ENST00000360565 STHQ8IWL8 128 aa12.87□□□□□ -0.35
SCAF1-201ENST00000360565 OR11H6Q8NGC7 330 aa12.87□□□□□ -0.35
SCAF1-201ENST00000360565 NACAE9PAV3 2078 aa12.87□□□□□ -0.35
SCAF1-201ENST00000360565 KIR2DL5BA0A0G2JN68 375 aa12.87□□□□□ -0.35
SCAF1-201ENST00000360565 KIR2DL5BA0A0G2JPC4 375 aa12.87□□□□□ -0.35
SCAF1-201ENST00000360565 PLNP26678 52 aa12.87□□□□□ -0.35
SCAF1-201ENST00000360565 C1orf229Q6ZS94 237 aaPredicted RBP12.87□□□□□ -0.35
SCAF1-201ENST00000360565 KIR2DL5AQ8N109 375 aa12.87□□□□□ -0.35
SCAF1-201ENST00000360565 TANC2Q9HCD6 1990 aa12.87□□□□□ -0.35
SCAF1-201ENST00000360565 IGF2BP2-AS1Q96M15 143 aa12.87□□□□□ -0.35
SCAF1-201ENST00000360565 LRP4O75096 1905 aa12.87□□□□□ -0.35
SCAF1-201ENST00000360565 TRAV2A0A0B4J234 112 aa12.87□□□□□ -0.35
SCAF1-201ENST00000360565 VCYO14598 125 aa12.87□□□□□ -0.35
SCAF1-201ENST00000360565 IGLV2-23P01705 113 aa12.87□□□□□ -0.35
SCAF1-201ENST00000360565 DAZAP2Q15038 168 aaPredicted RBP12.87□□□□□ -0.35
SCAF1-201ENST00000360565 TOMM7Q9P0U1 55 aa12.86□□□□□ -0.35
SCAF1-201ENST00000360565 LCNL1Q6ZST4 164 aa12.86□□□□□ -0.35
SCAF1-201ENST00000360565 SPOCK3Q9BQ16 436 aa12.86□□□□□ -0.35
SCAF1-201ENST00000360565 TLN2Q9Y4G6 2542 aa12.86□□□□□ -0.35
SCAF1-201ENST00000360565 TRAV26-2A0A0B4J265 109 aa12.86□□□□□ -0.35
SCAF1-201ENST00000360565 ABCA2Q9BZC7 2435 aa12.85□□□□□ -0.35
SCAF1-201ENST00000360565 H3BRM9 83 aa12.85□□□□□ -0.35
SCAF1-201ENST00000360565 C1orf122Q6ZSJ8 110 aa12.85□□□□□ -0.35
SCAF1-201ENST00000360565 EGR2P11161 476 aaPredicted RBP12.85□□□□□ -0.35
SCAF1-201ENST00000360565 LINC01549A6NIU2 74 aa12.85□□□□□ -0.35
SCAF1-201ENST00000360565 TMEM262E9PQX1 116 aa12.85□□□□□ -0.35
SCAF1-201ENST00000360565 DYNAPQ8N1N2 210 aa12.85□□□□□ -0.35
SCAF1-201ENST00000360565 ZNF503Q96F45 646 aa12.85□□□□□ -0.35
SCAF1-201ENST00000360565 DTX2Q86UW9 622 aa12.84□□□□□ -0.35
SCAF1-201ENST00000360565 YAE1D1Q9NRH1 226 aa12.84□□□□□ -0.35
SCAF1-201ENST00000360565 KIAA1549Q9HCM3 1950 aa12.84□□□□□ -0.35
SCAF1-201ENST00000360565 EIF4EBP1Q13541 118 aaPredicted RBP12.84□□□□□ -0.35
SCAF1-201ENST00000360565 TMEM101Q96IK0 257 aa12.84□□□□□ -0.35
SCAF1-201ENST00000360565 CHAC1Q9BUX1 264 aa12.84□□□□□ -0.35
SCAF1-201ENST00000360565 NDUFS8O00217 210 aa12.84□□□□□ -0.35
SCAF1-201ENST00000360565 KLF5Q13887 457 aaPredicted RBP12.84□□□□□ -0.35
SCAF1-201ENST00000360565 AGPAT4-IT1Q9H0P7 198 aa12.83□□□□□ -0.36
SCAF1-201ENST00000360565 A0A0U1RRA0 63 aa12.83□□□□□ -0.36
SCAF1-201ENST00000360565 GAGE12BA1L429 117 aa12.83□□□□□ -0.36
SCAF1-201ENST00000360565 TEX22C9J3V5 150 aa12.83□□□□□ -0.36
SCAF1-201ENST00000360565 RIPPLY3P57055 190 aa12.83□□□□□ -0.36
SCAF1-201ENST00000360565 IGHV7-81A0A0B4J1V7 117 aa12.83□□□□□ -0.36
SCAF1-201ENST00000360565 INS-IGF2F8WCM5 200 aa12.83□□□□□ -0.36
SCAF1-201ENST00000360565 HOXB4P17483 251 aaPredicted RBP12.83□□□□□ -0.36
SCAF1-201ENST00000360565 Q8N8P6 123 aa12.83□□□□□ -0.36
SCAF1-201ENST00000360565 COPS9Q8WXC6 57 aa12.83□□□□□ -0.36
SCAF1-201ENST00000360565 C2orf66Q6UXQ4 117 aa12.82□□□□□ -0.36
SCAF1-201ENST00000360565 Q8NA96 180 aa12.82□□□□□ -0.36
SCAF1-201ENST00000360565 LINC00173Q6ZV60 143 aa12.82□□□□□ -0.36
SCAF1-201ENST00000360565 ZNF747Q9BV97 191 aa12.82□□□□□ -0.36
SCAF1-201ENST00000360565 USP9YO00507 2555 aaPredicted RBP12.82□□□□□ -0.36
SCAF1-201ENST00000360565 HIVEP3Q5T1R4 2406 aa12.82□□□□□ -0.36
SCAF1-201ENST00000360565 LGALS9BQ3B8N2 356 aa12.82□□□□□ -0.36
SCAF1-201ENST00000360565 ANXA2RQ3ZCQ2 193 aa12.82□□□□□ -0.36
SCAF1-201ENST00000360565 LGALS9CQ6DKI2 356 aa12.82□□□□□ -0.36
SCAF1-201ENST00000360565 IGLV11-55A0A075B6I3 123 aa12.81□□□□□ -0.36
SCAF1-201ENST00000360565 COX8AP10176 69 aa12.81□□□□□ -0.36
SCAF1-201ENST00000360565 GTSF1Q8WW33 167 aa12.81□□□□□ -0.36
SCAF1-201ENST00000360565 SPINK13Q1W4C9 94 aa12.81□□□□□ -0.36
SCAF1-201ENST00000360565 OR13C6PQ8NH95 151 aa12.81□□□□□ -0.36
SCAF1-201ENST00000360565 USP9XQ93008 2570 aaPredicted RBP12.81□□□□□ -0.36
SCAF1-201ENST00000360565 NDUFA4O00483 81 aa12.81□□□□□ -0.36
SCAF1-201ENST00000360565 CTSGP08311 255 aa12.81□□□□□ -0.36
SCAF1-201ENST00000360565 SLC25A16P16260 332 aa12.81□□□□□ -0.36
SCAF1-201ENST00000360565 GAGE13Q4V321 117 aa12.81□□□□□ -0.36
SCAF1-201ENST00000360565 LINC01356Q8N9X3 169 aa12.81□□□□□ -0.36
SCAF1-201ENST00000360565 RNF223E7ERA6 249 aa12.8□□□□□ -0.36
SCAF1-201ENST00000360565 DEFB131AP59861 70 aa12.8□□□□□ -0.36
SCAF1-201ENST00000360565 Q6ZVH6 145 aa12.8□□□□□ -0.36
SCAF1-201ENST00000360565 IGKV1D-37A0A075B6S9 117 aa12.8□□□□□ -0.36
SCAF1-201ENST00000360565 KLF12Q9Y4X4 402 aa12.8□□□□□ -0.36
SCAF1-201ENST00000360565 SETD2Q9BYW2 2564 aaPredicted RBP12.8□□□□□ -0.36
SCAF1-201ENST00000360565 CENPVL3A0A0U1RRI6 287 aa12.79□□□□□ -0.36
SCAF1-201ENST00000360565 NPBQ8NG41 125 aa12.79□□□□□ -0.36
SCAF1-201ENST00000360565 MRPL35Q9NZE8 188 aaKnown RBP12.79□□□□□ -0.36
SCAF1-201ENST00000360565 LINC00574Q9H8X3 128 aa12.79□□□□□ -0.36
SCAF1-201ENST00000360565 ARHGAP32A7KAX9 2087 aa12.79□□□□□ -0.36
SCAF1-201ENST00000360565 F6UB75 175 aa12.79□□□□□ -0.36
SCAF1-201ENST00000360565 Q8N7P7 452 aa12.79□□□□□ -0.36
SCAF1-201ENST00000360565 CRYGCP07315 174 aa12.78□□□□□ -0.36
SCAF1-201ENST00000360565 FOXE3Q13461 319 aa12.78□□□□□ -0.36
SCAF1-201ENST00000360565 YPEL4Q96NS1 127 aa12.78□□□□□ -0.36
SCAF1-201ENST00000360565 MSRB1Q9NZV6 116 aa12.78□□□□□ -0.36
SCAF1-201ENST00000360565 DKK2Q9UBU2 259 aa12.78□□□□□ -0.36
SCAF1-201ENST00000360565 SPTBN4Q9H254 2564 aa12.78□□□□□ -0.36
SCAF1-201ENST00000360565 KNCNA6PVL3 124 aa12.78□□□□□ -0.36
SCAF1-201ENST00000360565 CHD8Q9HCK8 2581 aa12.78□□□□□ -0.36
SCAF1-201ENST00000360565 SPRY2O43597 315 aa12.78□□□□□ -0.36
SCAF1-201ENST00000360565 DNAL4O96015 105 aa12.78□□□□□ -0.36
SCAF1-201ENST00000360565 GATA1P15976 413 aaPredicted RBP12.78□□□□□ -0.36
SCAF1-201ENST00000360565 NEGR1Q7Z3B1 354 aa12.78□□□□□ -0.36
SCAF1-201ENST00000360565 KLHL30-AS1Q8NEE0 82 aa12.78□□□□□ -0.36
SCAF1-201ENST00000360565 TP53TG1Q9Y2A0 90 aa12.78□□□□□ -0.36
SCAF1-201ENST00000360565 ESDP10768 282 aa12.77□□□□□ -0.36
SCAF1-201ENST00000360565 ADORA2A-AS1P86434 159 aa12.77□□□□□ -0.36
SCAF1-201ENST00000360565 UBE2E2Q96LR5 201 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms