RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 TMEM86BQ8N661 226 aa4.9□□□□□ -1.62
VPS13B-203ENST00000358544 ZNF625Q96I27 306 aaPredicted RBP4.9□□□□□ -1.62
VPS13B-203ENST00000358544 PTPRSQ13332 1948 aa4.9□□□□□ -1.62
VPS13B-203ENST00000358544 FAM168AQ92567 244 aa4.9□□□□□ -1.62
VPS13B-203ENST00000358544 PRDM6Q9NQX0 595 aa4.9□□□□□ -1.62
VPS13B-203ENST00000358544 TMEM14CQ9P0S9 112 aa4.9□□□□□ -1.62
VPS13B-203ENST00000358544 NBR2O15453 112 aa4.9□□□□□ -1.62
VPS13B-203ENST00000358544 LINC00158P58513 81 aa4.9□□□□□ -1.63
VPS13B-203ENST00000358544 DUX5Q96PT3 197 aa4.9□□□□□ -1.63
VPS13B-203ENST00000358544 NDUFC2O95298 119 aa4.9□□□□□ -1.63
VPS13B-203ENST00000358544 TMEM167AQ8TBQ9 72 aa4.9□□□□□ -1.63
VPS13B-203ENST00000358544 F8VRH5 84 aa4.9□□□□□ -1.63
VPS13B-203ENST00000358544 DPM3Q9P2X0 92 aa4.9□□□□□ -1.63
VPS13B-203ENST00000358544 LAMTOR3Q9UHA4 124 aa4.9□□□□□ -1.63
VPS13B-203ENST00000358544 IGFL4Q6B9Z1 124 aa4.9□□□□□ -1.63
VPS13B-203ENST00000358544 TRBV25-1A0A075B6N4 114 aa4.89□□□□□ -1.63
VPS13B-203ENST00000358544 E9PLN8 166 aa4.89□□□□□ -1.63
VPS13B-203ENST00000358544 CTRLP40313 264 aa4.89□□□□□ -1.63
VPS13B-203ENST00000358544 ZCCHC24Q8N2G6 241 aaKnown RBP4.89□□□□□ -1.63
VPS13B-203ENST00000358544 ACYP1P07311 99 aa4.89□□□□□ -1.63
VPS13B-203ENST00000358544 ARTNQ5T4W7 220 aa4.89□□□□□ -1.63
VPS13B-203ENST00000358544 K7EMI3 77 aa4.89□□□□□ -1.63
VPS13B-203ENST00000358544 IGKV3D-20A0A0C4DH25 116 aa4.89□□□□□ -1.63
VPS13B-203ENST00000358544 OVOL1O14753 267 aa4.89□□□□□ -1.63
VPS13B-203ENST00000358544 PSPNO60542 156 aa4.89□□□□□ -1.63
VPS13B-203ENST00000358544 C2orf66Q6UXQ4 117 aa4.89□□□□□ -1.63
VPS13B-203ENST00000358544 CLEC19AQ6UXS0 136 aa4.89□□□□□ -1.63
VPS13B-203ENST00000358544 C1orf162Q8NEQ5 155 aaPredicted RBP4.89□□□□□ -1.63
VPS13B-203ENST00000358544 FRMD6-AS1P0C7T7 363 aa4.89□□□□□ -1.63
VPS13B-203ENST00000358544 LINC01620Q4KN68 170 aa4.89□□□□□ -1.63
VPS13B-203ENST00000358544 C16orf54Q6UWD8 224 aa4.89□□□□□ -1.63
VPS13B-203ENST00000358544 TP73-AS1Q9UF72 201 aa4.89□□□□□ -1.63
VPS13B-203ENST00000358544 GATD1Q8NB37 220 aa4.89□□□□□ -1.63
VPS13B-203ENST00000358544 PHLDA1Q8WV24 401 aaPredicted RBP4.89□□□□□ -1.63
VPS13B-203ENST00000358544 FXYD5Q96DB9 178 aa4.89□□□□□ -1.63
VPS13B-203ENST00000358544 TP53TG1Q9Y2A0 90 aa4.89□□□□□ -1.63
VPS13B-203ENST00000358544 CFC1BP0CG36 223 aa4.89□□□□□ -1.63
VPS13B-203ENST00000358544 CFC1P0CG37 223 aa4.89□□□□□ -1.63
VPS13B-203ENST00000358544 RBM3P98179 157 aaKnown RBP4.89□□□□□ -1.63
VPS13B-203ENST00000358544 FAM120AOSQ5T036 256 aa4.89□□□□□ -1.63
VPS13B-203ENST00000358544 SPXQ9BT56 116 aa4.89□□□□□ -1.63
VPS13B-203ENST00000358544 TRGV3P03979 118 aa4.89□□□□□ -1.63
VPS13B-203ENST00000358544 SRD5A1P18405 259 aa4.89□□□□□ -1.63
VPS13B-203ENST00000358544 PTH2Q96A98 100 aa4.89□□□□□ -1.63
VPS13B-203ENST00000358544 C11orf1Q9H5F2 150 aa4.89□□□□□ -1.63
VPS13B-203ENST00000358544 NTN3O00634 580 aaPredicted RBP4.88□□□□□ -1.63
VPS13B-203ENST00000358544 IGKV3-20P01619 116 aa4.88□□□□□ -1.63
VPS13B-203ENST00000358544 PRR20EP86478 221 aa4.88□□□□□ -1.63
VPS13B-203ENST00000358544 PRR20CP86479 221 aa4.88□□□□□ -1.63
VPS13B-203ENST00000358544 PRR20DP86480 221 aa4.88□□□□□ -1.63
VPS13B-203ENST00000358544 PRR20BP86481 221 aa4.88□□□□□ -1.63
VPS13B-203ENST00000358544 PRR20AP86496 221 aa4.88□□□□□ -1.63
VPS13B-203ENST00000358544 COLQQ9Y215 455 aaPredicted RBP4.88□□□□□ -1.63
VPS13B-203ENST00000358544 LINC00205P59089 165 aa4.88□□□□□ -1.63
VPS13B-203ENST00000358544 ITPR2Q14571 2701 aa4.88□□□□□ -1.63
VPS13B-203ENST00000358544 ATOX1O00244 68 aa4.88□□□□□ -1.63
VPS13B-203ENST00000358544 SRSF2Q01130 221 aaKnown RBP4.88□□□□□ -1.63
VPS13B-203ENST00000358544 PAX4O43316 350 aa4.88□□□□□ -1.63
VPS13B-203ENST00000358544 GLRXP35754 106 aa4.88□□□□□ -1.63
VPS13B-203ENST00000358544 MLANAQ16655 118 aa4.88□□□□□ -1.63
VPS13B-203ENST00000358544 DTX2Q86UW9 622 aa4.88□□□□□ -1.63
VPS13B-203ENST00000358544 DUX3Q96PT4 197 aa4.88□□□□□ -1.63
VPS13B-203ENST00000358544 E9PLD3 99 aa4.88□□□□□ -1.63
VPS13B-203ENST00000358544 TNKS1BP1Q9C0C2 1729 aaKnown RBP4.88□□□□□ -1.63
VPS13B-203ENST00000358544 ZNF784Q8NCA9 323 aaPredicted RBP4.87□□□□□ -1.63
VPS13B-203ENST00000358544 THSD7AQ9UPZ6 1657 aa4.87□□□□□ -1.63
VPS13B-203ENST00000358544 A0A087WWL8 130 aa4.87□□□□□ -1.63
VPS13B-203ENST00000358544 DEFB104AQ8WTQ1 72 aa4.87□□□□□ -1.63
VPS13B-203ENST00000358544 SRRM4A7MD48 611 aaKnown RBP4.87□□□□□ -1.63
VPS13B-203ENST00000358544 IGHV1-2P23083 117 aa4.87□□□□□ -1.63
VPS13B-203ENST00000358544 C20orf78Q9BR46 151 aa4.87□□□□□ -1.63
VPS13B-203ENST00000358544 IGHV3OR16-12A0A075B7B8 117 aa4.87□□□□□ -1.63
VPS13B-203ENST00000358544 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.87□□□□□ -1.63
VPS13B-203ENST00000358544 IGLV3-12A0A075B6K2 115 aa4.87□□□□□ -1.63
VPS13B-203ENST00000358544 RPL32P62910 135 aaKnown RBP4.87□□□□□ -1.63
VPS13B-203ENST00000358544 ZNF493Q6ZR52 646 aa4.87□□□□□ -1.63
VPS13B-203ENST00000358544 TIMM23O14925 209 aa4.87□□□□□ -1.63
VPS13B-203ENST00000358544 C1orf53Q5VUE5 145 aa4.87□□□□□ -1.63
VPS13B-203ENST00000358544 H3BQ85 93 aa4.87□□□□□ -1.63
VPS13B-203ENST00000358544 TTTY13Q9BZ97 58 aa4.87□□□□□ -1.63
VPS13B-203ENST00000358544 ICOSQ9Y6W8 199 aa4.87□□□□□ -1.63
VPS13B-203ENST00000358544 LINC01587Q99440 93 aa4.87□□□□□ -1.63
VPS13B-203ENST00000358544 TRAV26-2A0A0B4J265 109 aa4.86□□□□□ -1.63
VPS13B-203ENST00000358544 C2orf70A6NJV1 201 aa4.86□□□□□ -1.63
VPS13B-203ENST00000358544 Q6ZR03 302 aa4.86□□□□□ -1.63
VPS13B-203ENST00000358544 RNF5Q99942 180 aa4.86□□□□□ -1.63
VPS13B-203ENST00000358544 KNCNA6PVL3 124 aa4.86□□□□□ -1.63
VPS13B-203ENST00000358544 A0A1B0GX51 115 aa4.86□□□□□ -1.63
VPS13B-203ENST00000358544 H3BRN7 92 aa4.86□□□□□ -1.63
VPS13B-203ENST00000358544 DUSP14O95147 198 aaKnown RBP4.86□□□□□ -1.63
VPS13B-203ENST00000358544 IGHV3-73A0A0B4J1V6 119 aa4.86□□□□□ -1.63
VPS13B-203ENST00000358544 RS1O15537 224 aa4.86□□□□□ -1.63
VPS13B-203ENST00000358544 COL4A5P29400 1685 aa4.86□□□□□ -1.63
VPS13B-203ENST00000358544 IGKV1D-17A0A075B6S4 117 aa4.86□□□□□ -1.63
VPS13B-203ENST00000358544 GAFA1Q96PS6 74 aa4.86□□□□□ -1.63
VPS13B-203ENST00000358544 DUX4L9Q6RFH8 374 aaPredicted RBP4.86□□□□□ -1.63
VPS13B-203ENST00000358544 MAFAQ8NHW3 353 aaPredicted RBP4.86□□□□□ -1.63
VPS13B-203ENST00000358544 BAALC-AS2P0C853 105 aa4.85□□□□□ -1.63
VPS13B-203ENST00000358544 SPATA25Q9BR10 227 aa4.85□□□□□ -1.63
VPS13B-203ENST00000358544 HERVK_113P63121 156 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms