RNA–Protein interactions for RNA: ENST00000358519.8

CNGA1-201, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNGA1, Length 2,627 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-201ENST00000358519 IFI27L1Q96BM0 104 aa3.15□□□□□ -1.91
CNGA1-201ENST00000358519 AJUBAQ96IF1 538 aa3.15□□□□□ -1.91
CNGA1-201ENST00000358519 FAM167A-AS1Q96KT0 104 aa3.15□□□□□ -1.91
CNGA1-201ENST00000358519 MLST8Q9BVC4 326 aa3.15□□□□□ -1.91
CNGA1-201ENST00000358519 SLC25A2Q9BXI2 301 aa3.15□□□□□ -1.91
CNGA1-201ENST00000358519 GFRA4Q9GZZ7 299 aa3.15□□□□□ -1.91
CNGA1-201ENST00000358519 VCX2Q9H322 139 aa3.15□□□□□ -1.91
CNGA1-201ENST00000358519 MAP1LC3AQ9H492 121 aa3.15□□□□□ -1.91
CNGA1-201ENST00000358519 GAGE2DQ9UEU5 116 aa3.15□□□□□ -1.91
CNGA1-201ENST00000358519 HHLA3Q9XRX5 114 aa3.15□□□□□ -1.91
CNGA1-201ENST00000358519 MINOS1-NBL1R4GNA1 71 aa3.15□□□□□ -1.91
CNGA1-201ENST00000358519 PKDREJQ9NTG1 2253 aa3.15□□□□□ -1.91
CNGA1-201ENST00000358519 POLEQ07864 2286 aa3.14□□□□□ -1.91
CNGA1-201ENST00000358519 NBEAL1Q6ZS30 2694 aa3.14□□□□□ -1.91
CNGA1-201ENST00000358519 C19orf71A6NCJ1 209 aa3.14□□□□□ -1.91
CNGA1-201ENST00000358519 SRRM4A7MD48 611 aaKnown RBP3.14□□□□□ -1.91
CNGA1-201ENST00000358519 C12orf77C9JDV5 145 aa3.14□□□□□ -1.91
CNGA1-201ENST00000358519 TMEM178BH3BS89 294 aa3.14□□□□□ -1.91
CNGA1-201ENST00000358519 NDUFB3O43676 98 aa3.14□□□□□ -1.91
CNGA1-201ENST00000358519 LYZL6O75951 148 aa3.14□□□□□ -1.91
CNGA1-201ENST00000358519 MOSP00540 346 aa3.14□□□□□ -1.91
CNGA1-201ENST00000358519 IGHV1-46P01743 117 aa3.14□□□□□ -1.91
CNGA1-201ENST00000358519 ZNF688P0C7X2 276 aa3.14□□□□□ -1.91
CNGA1-201ENST00000358519 MPV17P39210 176 aa3.14□□□□□ -1.91
CNGA1-201ENST00000358519 C5orf47Q569G3 176 aa3.14□□□□□ -1.91
CNGA1-201ENST00000358519 MEIG1Q5JSS6 88 aa3.14□□□□□ -1.91
CNGA1-201ENST00000358519 FAM159AQ6UWV7 190 aa3.14□□□□□ -1.91
CNGA1-201ENST00000358519 PRIMA1Q86XR5 153 aa3.14□□□□□ -1.91
CNGA1-201ENST00000358519 DAZAP1Q96EP5 407 aaKnown RBP3.14□□□□□ -1.91
CNGA1-201ENST00000358519 S1PR3Q99500 378 aa3.14□□□□□ -1.91
CNGA1-201ENST00000358519 PRNDQ9UKY0 176 aa3.14□□□□□ -1.91
CNGA1-201ENST00000358519 TRAV4A0A0B4J268 109 aa3.14□□□□□ -1.91
CNGA1-201ENST00000358519 DEFB108AA8MXU0 73 aa3.14□□□□□ -1.91
CNGA1-201ENST00000358519 SHISA9B4DS77 424 aa3.14□□□□□ -1.91
CNGA1-201ENST00000358519 TMEM262E9PQX1 116 aa3.14□□□□□ -1.91
CNGA1-201ENST00000358519 C15orf65H3BRN8 121 aa3.14□□□□□ -1.91
CNGA1-201ENST00000358519 NDUFS7O75251 213 aa3.14□□□□□ -1.91
CNGA1-201ENST00000358519 HBDP02042 147 aa3.14□□□□□ -1.91
CNGA1-201ENST00000358519 FCER1GP30273 86 aa3.14□□□□□ -1.91
CNGA1-201ENST00000358519 ERVK-16P61578 105 aa3.14□□□□□ -1.91
CNGA1-201ENST00000358519 FOXF2Q12947 444 aa3.14□□□□□ -1.91
CNGA1-201ENST00000358519 ADIPOQQ15848 244 aa3.14□□□□□ -1.91
CNGA1-201ENST00000358519 ZNF833PQ6ZTB9 187 aa3.14□□□□□ -1.91
CNGA1-201ENST00000358519 TEN1Q86WV5 123 aa3.14□□□□□ -1.91
CNGA1-201ENST00000358519 LY6G5BQ8NDX9 201 aa3.14□□□□□ -1.91
CNGA1-201ENST00000358519 OR9G1Q8NH87 305 aa3.14□□□□□ -1.91
CNGA1-201ENST00000358519 ITLN1Q8WWA0 313 aa3.14□□□□□ -1.91
CNGA1-201ENST00000358519 DLX4Q92988 240 aaPredicted RBP3.14□□□□□ -1.91
CNGA1-201ENST00000358519 COQ2Q96H96 371 aa3.14□□□□□ -1.91
CNGA1-201ENST00000358519 CSDC2Q9Y534 153 aaKnown RBP3.14□□□□□ -1.91
CNGA1-201ENST00000358519 SPENQ96T58 3664 aaKnown RBP3.13□□□□□ -1.91
CNGA1-201ENST00000358519 IGHV3-43A0A0B4J1X8 118 aa3.13□□□□□ -1.91
CNGA1-201ENST00000358519 A0A1B0GUT8 65 aa3.13□□□□□ -1.91
CNGA1-201ENST00000358519 WI2-2373I1.2A0A1W2PRP0 233 aa3.13□□□□□ -1.91
CNGA1-201ENST00000358519 J3QLI3 93 aa3.13□□□□□ -1.91
CNGA1-201ENST00000358519 SNCGO76070 127 aa3.13□□□□□ -1.91
CNGA1-201ENST00000358519 ARMS2P0C7Q2 107 aa3.13□□□□□ -1.91
CNGA1-201ENST00000358519 IGHV3-43DP0DP04 118 aa3.13□□□□□ -1.91
CNGA1-201ENST00000358519 LOXP28300 417 aaPredicted RBP3.13□□□□□ -1.91
CNGA1-201ENST00000358519 PSMB2P49721 201 aa3.13□□□□□ -1.91
CNGA1-201ENST00000358519 TAL2Q16559 108 aa3.13□□□□□ -1.91
CNGA1-201ENST00000358519 PVRIGQ6DKI7 326 aa3.13□□□□□ -1.91
CNGA1-201ENST00000358519 C11orf71Q6IPW1 123 aa3.13□□□□□ -1.91
CNGA1-201ENST00000358519 MORN3Q6PF18 240 aaPredicted RBP3.13□□□□□ -1.91
CNGA1-201ENST00000358519 SLC25A48Q6ZT89 311 aaKnown RBP3.13□□□□□ -1.91
CNGA1-201ENST00000358519 Q71RC1 249 aaPredicted RBP3.13□□□□□ -1.91
CNGA1-201ENST00000358519 WDR86Q86TI4 376 aa3.13□□□□□ -1.91
CNGA1-201ENST00000358519 GTSCR1Q86UQ5 136 aa3.13□□□□□ -1.91
CNGA1-201ENST00000358519 IGFBPL1Q8WX77 278 aa3.13□□□□□ -1.91
CNGA1-201ENST00000358519 TMEM158Q8WZ71 300 aa3.13□□□□□ -1.91
CNGA1-201ENST00000358519 NRGNQ92686 78 aa3.13□□□□□ -1.91
CNGA1-201ENST00000358519 RPEQ96AT9 228 aa3.13□□□□□ -1.91
CNGA1-201ENST00000358519 RITA1Q96K30 269 aa3.13□□□□□ -1.91
CNGA1-201ENST00000358519 HIST1H4GQ99525 98 aa3.13□□□□□ -1.91
CNGA1-201ENST00000358519 PAXXQ9BUH6 204 aa3.13□□□□□ -1.91
CNGA1-201ENST00000358519 FBXL15Q9H469 300 aa3.13□□□□□ -1.91
CNGA1-201ENST00000358519 SPANXA1Q9NS26 97 aa3.13□□□□□ -1.91
CNGA1-201ENST00000358519 BEX4Q9NWD9 120 aaPredicted RBP3.13□□□□□ -1.91
CNGA1-201ENST00000358519 RPUSD1Q9UJJ7 312 aaKnown RBP3.13□□□□□ -1.91
CNGA1-201ENST00000358519 EPDR1Q9UM22 224 aa3.13□□□□□ -1.91
CNGA1-201ENST00000358519 FOXA2Q9Y261 457 aaPredicted RBP3.13□□□□□ -1.91
CNGA1-201ENST00000358519 KLF12Q9Y4X4 402 aa3.13□□□□□ -1.91
CNGA1-201ENST00000358519 AKAP9Q99996 3911 aa3.13□□□□□ -1.91
CNGA1-201ENST00000358519 D6R8Y8 96 aa3.13□□□□□ -1.91
CNGA1-201ENST00000358519 HOXA3O43365 443 aaPredicted RBP3.13□□□□□ -1.91
CNGA1-201ENST00000358519 PROP1O75360 226 aa3.13□□□□□ -1.91
CNGA1-201ENST00000358519 CRLF1O75462 422 aa3.13□□□□□ -1.91
CNGA1-201ENST00000358519 FCN3O75636 299 aa3.13□□□□□ -1.91
CNGA1-201ENST00000358519 EVI2AP22794 236 aa3.13□□□□□ -1.91
CNGA1-201ENST00000358519 MYCNOSP40205 109 aa3.13□□□□□ -1.91
CNGA1-201ENST00000358519 PAX8Q06710 450 aa3.13□□□□□ -1.91
CNGA1-201ENST00000358519 PSMG4Q5JS54 123 aa3.13□□□□□ -1.91
CNGA1-201ENST00000358519 KLF17Q5JT82 389 aaPredicted RBP3.13□□□□□ -1.91
CNGA1-201ENST00000358519 MAPKAPK5-AS1Q8N8E1 139 aa3.13□□□□□ -1.91
CNGA1-201ENST00000358519 GAFA1Q96PS6 74 aa3.13□□□□□ -1.91
CNGA1-201ENST00000358519 MRPL32Q9BYC8 188 aaKnown RBP3.13□□□□□ -1.91
CNGA1-201ENST00000358519 ZMAT4Q9H898 229 aa3.13□□□□□ -1.91
CNGA1-201ENST00000358519 ENY2Q9NPA8 101 aa3.13□□□□□ -1.91
CNGA1-201ENST00000358519 ZNF492Q9P255 531 aa3.13□□□□□ -1.91
CNGA1-201ENST00000358519 FZR1Q9UM11 496 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms