RNA–Protein interactions for RNA: ENST00000356141.8

NPAS3-202, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-202ENST00000356141 K7EQM0 130 aa13.49□□□□□ -0.25
NPAS3-202ENST00000356141 CRISP2P16562 243 aa13.49□□□□□ -0.25
NPAS3-202ENST00000356141 COA6Q5JTJ3 125 aaKnown RBP13.49□□□□□ -0.25
NPAS3-202ENST00000356141 ZNF738Q8NE65 137 aa13.49□□□□□ -0.25
NPAS3-202ENST00000356141 RCHY1Q96PM5 261 aa13.49□□□□□ -0.25
NPAS3-202ENST00000356141 C20orf144Q9BQM9 153 aa13.49□□□□□ -0.25
NPAS3-202ENST00000356141 VAMP3Q15836 100 aa13.49□□□□□ -0.25
NPAS3-202ENST00000356141 BOD1L2Q8IYS8 172 aa13.49□□□□□ -0.25
NPAS3-202ENST00000356141 PSMG3-AS1Q96PY0 264 aa13.49□□□□□ -0.25
NPAS3-202ENST00000356141 CST9LQ9H4G1 147 aa13.49□□□□□ -0.25
NPAS3-202ENST00000356141 TP53TG3Q9ULZ0 132 aa13.49□□□□□ -0.25
NPAS3-202ENST00000356141 TIMM8BQ9Y5J9 83 aaPredicted RBP13.49□□□□□ -0.25
NPAS3-202ENST00000356141 A0A1B0GW15 77 aa13.49□□□□□ -0.25
NPAS3-202ENST00000356141 IZUMO1RA6ND01 250 aa13.49□□□□□ -0.25
NPAS3-202ENST00000356141 SERF1AO75920 110 aa13.49□□□□□ -0.25
NPAS3-202ENST00000356141 C8orf86Q6ZUL3 223 aa13.49□□□□□ -0.25
NPAS3-202ENST00000356141 MBD6Q96DN6 1003 aa13.49□□□□□ -0.25
NPAS3-202ENST00000356141 C16orf92Q96LL3 132 aa13.49□□□□□ -0.25
NPAS3-202ENST00000356141 TSKUQ8WUA8 353 aa13.48□□□□□ -0.25
NPAS3-202ENST00000356141 FAM223BA6NKX1 122 aa13.48□□□□□ -0.25
NPAS3-202ENST00000356141 HINT1P49773 126 aaPredicted RBP13.48□□□□□ -0.25
NPAS3-202ENST00000356141 SRSF2Q01130 221 aaKnown RBP13.48□□□□□ -0.25
NPAS3-202ENST00000356141 FAM223AQ8IWN6 122 aa13.48□□□□□ -0.25
NPAS3-202ENST00000356141 C19orf71A6NCJ1 209 aa13.47□□□□□ -0.25
NPAS3-202ENST00000356141 FAM19A2Q8N3H0 131 aa13.47□□□□□ -0.25
NPAS3-202ENST00000356141 SMIM12Q96EX1 92 aa13.47□□□□□ -0.25
NPAS3-202ENST00000356141 C20orf173Q96LM9 149 aa13.47□□□□□ -0.25
NPAS3-202ENST00000356141 VPREB3Q9UKI3 123 aa13.47□□□□□ -0.25
NPAS3-202ENST00000356141 APCSP02743 223 aa13.46□□□□□ -0.25
NPAS3-202ENST00000356141 ARMS2P0C7Q2 107 aa13.46□□□□□ -0.25
NPAS3-202ENST00000356141 COX11Q9Y6N1 276 aa13.46□□□□□ -0.25
NPAS3-202ENST00000356141 HIVEP2P31629 2446 aa13.46□□□□□ -0.25
NPAS3-202ENST00000356141 TRAV8-2A0A0B4J237 113 aa13.46□□□□□ -0.25
NPAS3-202ENST00000356141 CT45A10P0DMU9 189 aa13.46□□□□□ -0.25
NPAS3-202ENST00000356141 PMCHP20382 165 aa13.46□□□□□ -0.25
NPAS3-202ENST00000356141 PSG9Q00887 426 aa13.46□□□□□ -0.25
NPAS3-202ENST00000356141 WIPF2Q8TF74 440 aaPredicted RBP13.46□□□□□ -0.25
NPAS3-202ENST00000356141 AGRNO00468 2067 aa13.46□□□□□ -0.25
NPAS3-202ENST00000356141 SH2D1AO60880 128 aa13.45□□□□□ -0.26
NPAS3-202ENST00000356141 LINC00310P59036 64 aa13.45□□□□□ -0.26
NPAS3-202ENST00000356141 NPFFR1Q9GZQ6 430 aa13.45□□□□□ -0.26
NPAS3-202ENST00000356141 ORM1P02763 201 aa13.45□□□□□ -0.26
NPAS3-202ENST00000356141 HERV-K104P63124 156 aa13.45□□□□□ -0.26
NPAS3-202ENST00000356141 Q6ZN92 141 aa13.45□□□□□ -0.26
NPAS3-202ENST00000356141 LAMTOR2Q9Y2Q5 125 aa13.45□□□□□ -0.26
NPAS3-202ENST00000356141 JMJD1CQ15652 2540 aa13.45□□□□□ -0.26
NPAS3-202ENST00000356141 ZNF253O75346 499 aa13.45□□□□□ -0.26
NPAS3-202ENST00000356141 IGKV3-20P01619 116 aa13.45□□□□□ -0.26
NPAS3-202ENST00000356141 ZNF138P52744 262 aa13.45□□□□□ -0.26
NPAS3-202ENST00000356141 PMCHL1Q16048 86 aa13.45□□□□□ -0.26
NPAS3-202ENST00000356141 RHPN1-AS1Q9BWJ2 59 aa13.45□□□□□ -0.26
NPAS3-202ENST00000356141 ANK3Q12955 4377 aaKnown RBP13.44□□□□□ -0.26
NPAS3-202ENST00000356141 A8MWL6 223 aa13.44□□□□□ -0.26
NPAS3-202ENST00000356141 NTF3P20783 257 aa13.44□□□□□ -0.26
NPAS3-202ENST00000356141 SYNJ2BPP57105 145 aa13.44□□□□□ -0.26
NPAS3-202ENST00000356141 KIR3DS1Q14943 382 aa13.44□□□□□ -0.26
NPAS3-202ENST00000356141 Q6YL49 198 aa13.44□□□□□ -0.26
NPAS3-202ENST00000356141 FAM231DQ6ZW35 169 aa13.44□□□□□ -0.26
NPAS3-202ENST00000356141 PRR25Q96S07 402 aa13.44□□□□□ -0.26
NPAS3-202ENST00000356141 A0A1W2PRX2 142 aa13.44□□□□□ -0.26
NPAS3-202ENST00000356141 IGLV1-40P01703 118 aa13.44□□□□□ -0.26
NPAS3-202ENST00000356141 J3QLI3 93 aa13.43□□□□□ -0.26
NPAS3-202ENST00000356141 CSN3P07498 182 aa13.43□□□□□ -0.26
NPAS3-202ENST00000356141 HNRNPA3P51991 378 aaKnown RBP13.43□□□□□ -0.26
NPAS3-202ENST00000356141 PDE6HQ13956 83 aa13.43□□□□□ -0.26
NPAS3-202ENST00000356141 PRSS22Q9GZN4 317 aa13.43□□□□□ -0.26
NPAS3-202ENST00000356141 GNB1LQ9BYB4 327 aa13.43□□□□□ -0.26
NPAS3-202ENST00000356141 YAE1D1Q9NRH1 226 aa13.43□□□□□ -0.26
NPAS3-202ENST00000356141 TMEM213A2RRL7 107 aa13.42□□□□□ -0.26
NPAS3-202ENST00000356141 LYPD1Q8N2G4 141 aa13.42□□□□□ -0.26
NPAS3-202ENST00000356141 SAMD10Q9BYL1 202 aa13.42□□□□□ -0.26
NPAS3-202ENST00000356141 AGPAT4-IT1Q9H0P7 198 aa13.42□□□□□ -0.26
NPAS3-202ENST00000356141 ZNF702PQ9H963 129 aa13.42□□□□□ -0.26
NPAS3-202ENST00000356141 PEF1Q9UBV8 284 aaKnown RBP13.42□□□□□ -0.26
NPAS3-202ENST00000356141 FN1P02751 2386 aaKnown RBP13.42□□□□□ -0.26
NPAS3-202ENST00000356141 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.41□□□□□ -0.26
NPAS3-202ENST00000356141 CYSRT1A8MQ03 144 aa13.41□□□□□ -0.26
NPAS3-202ENST00000356141 PSMB8P28062 276 aa13.41□□□□□ -0.26
NPAS3-202ENST00000356141 FOXE3Q13461 319 aa13.41□□□□□ -0.26
NPAS3-202ENST00000356141 TEX43Q6ZNM6 134 aa13.41□□□□□ -0.26
NPAS3-202ENST00000356141 GPHB5Q86YW7 130 aa13.41□□□□□ -0.26
NPAS3-202ENST00000356141 RNF114Q9Y508 228 aa13.41□□□□□ -0.26
NPAS3-202ENST00000356141 CFHR3Q02985 330 aa13.41□□□□□ -0.26
NPAS3-202ENST00000356141 TMEM189A5PLL7 270 aa13.4□□□□□ -0.26
NPAS3-202ENST00000356141 Q6ZWC4 215 aa13.4□□□□□ -0.26
NPAS3-202ENST00000356141 IGHV4OR15-8A0A075B7B6 117 aa13.4□□□□□ -0.26
NPAS3-202ENST00000356141 A0A087WW49 117 aa13.4□□□□□ -0.26
NPAS3-202ENST00000356141 FBLL1A6NHQ2 334 aaKnown RBP13.4□□□□□ -0.26
NPAS3-202ENST00000356141 HAX1O00165 279 aa13.4□□□□□ -0.26
NPAS3-202ENST00000356141 LYZL1Q6UWQ5 148 aa13.4□□□□□ -0.26
NPAS3-202ENST00000356141 USMG5Q96IX5 58 aa13.4□□□□□ -0.26
NPAS3-202ENST00000356141 MSRB1Q9NZV6 116 aa13.4□□□□□ -0.26
NPAS3-202ENST00000356141 A0A0G2JLM5 398 aa13.4□□□□□ -0.27
NPAS3-202ENST00000356141 K7ERU9 68 aa13.4□□□□□ -0.27
NPAS3-202ENST00000356141 CRIP2P52943 208 aaPredicted RBP13.4□□□□□ -0.27
NPAS3-202ENST00000356141 HBBP68871 147 aa13.4□□□□□ -0.27
NPAS3-202ENST00000356141 RBPMS2Q6ZRY4 209 aaKnown RBP13.4□□□□□ -0.27
NPAS3-202ENST00000356141 CITED2Q99967 270 aaPredicted RBP13.4□□□□□ -0.27
NPAS3-202ENST00000356141 HIST1H1AQ02539 215 aaPredicted RBP13.39□□□□□ -0.27
NPAS3-202ENST00000356141 NDUFA4O00483 81 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms