RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 TRGV3P03979 118 aa18.85■□□□□ 0.61
CPNE1-202ENST00000352393 UBE2E1P51965 193 aa18.85■□□□□ 0.61
CPNE1-202ENST00000352393 CLEC19AQ6UXS0 136 aa18.85■□□□□ 0.61
CPNE1-202ENST00000352393 WNK2Q9Y3S1 2297 aa18.84■□□□□ 0.61
CPNE1-202ENST00000352393 TMEM158Q8WZ71 300 aa18.84■□□□□ 0.61
CPNE1-202ENST00000352393 IGHV7-4-1A0A0J9YVY3 117 aa18.83■□□□□ 0.61
CPNE1-202ENST00000352393 HIGD1BQ9P298 99 aa18.83■□□□□ 0.61
CPNE1-202ENST00000352393 OR2K2Q8NGT1 345 aa18.83■□□□□ 0.6
CPNE1-202ENST00000352393 IGKCP01834 107 aa18.82■□□□□ 0.6
CPNE1-202ENST00000352393 NAA38Q9BRA0 125 aaKnown RBP18.82■□□□□ 0.6
CPNE1-202ENST00000352393 VPS25Q9BRG1 176 aa18.82■□□□□ 0.6
CPNE1-202ENST00000352393 IGHV3OR16-13A0A075B7E8 117 aa18.82■□□□□ 0.6
CPNE1-202ENST00000352393 IGHV3-74A0A0B4J1X5 117 aa18.82■□□□□ 0.6
CPNE1-202ENST00000352393 PRSS47A8MTI9 375 aa18.82■□□□□ 0.6
CPNE1-202ENST00000352393 G3V318 75 aa18.82■□□□□ 0.6
CPNE1-202ENST00000352393 K7ERU9 68 aa18.82■□□□□ 0.6
CPNE1-202ENST00000352393 PRSS1P07477 247 aa18.82■□□□□ 0.6
CPNE1-202ENST00000352393 TMEM78Q5T7P6 136 aa18.82■□□□□ 0.6
CPNE1-202ENST00000352393 C8orf86Q6ZUL3 223 aa18.82■□□□□ 0.6
CPNE1-202ENST00000352393 NRACQ8N912 160 aa18.82■□□□□ 0.6
CPNE1-202ENST00000352393 EEF1AKMT3Q96AZ1 226 aa18.82■□□□□ 0.6
CPNE1-202ENST00000352393 ATP5LO75964 103 aa18.81■□□□□ 0.6
CPNE1-202ENST00000352393 SAA4P35542 130 aa18.81■□□□□ 0.6
CPNE1-202ENST00000352393 FOXC2Q99958 501 aa18.81■□□□□ 0.6
CPNE1-202ENST00000352393 HIF1ANQ9NWT6 349 aa18.81■□□□□ 0.6
CPNE1-202ENST00000352393 SMPXQ9UHP9 88 aa18.81■□□□□ 0.6
CPNE1-202ENST00000352393 U3KQE9 123 aa18.81■□□□□ 0.6
CPNE1-202ENST00000352393 METTL26Q96S19 204 aa18.8■□□□□ 0.6
CPNE1-202ENST00000352393 SPTA1P02549 2419 aa18.8■□□□□ 0.6
CPNE1-202ENST00000352393 A0A1W2PPR1 153 aa18.8■□□□□ 0.6
CPNE1-202ENST00000352393 LINC01548A6NM66 108 aa18.8■□□□□ 0.6
CPNE1-202ENST00000352393 C9orf47Q6ZRZ4 202 aa18.8■□□□□ 0.6
CPNE1-202ENST00000352393 DPM2O94777 84 aa18.79■□□□□ 0.6
CPNE1-202ENST00000352393 RAB37Q96AX2 223 aa18.79■□□□□ 0.6
CPNE1-202ENST00000352393 IGHV4-4A0A075B6R2 117 aa18.79■□□□□ 0.6
CPNE1-202ENST00000352393 TRBV7-1A0A0A6YYK4 115 aa18.79■□□□□ 0.6
CPNE1-202ENST00000352393 A0A1W2PPM0 123 aa18.79■□□□□ 0.6
CPNE1-202ENST00000352393 IGHV3-49A0A0A0MS15 119 aa18.78■□□□□ 0.6
CPNE1-202ENST00000352393 HLA-DRB4P13762 266 aa18.78■□□□□ 0.6
CPNE1-202ENST00000352393 UCNP55089 124 aa18.78■□□□□ 0.6
CPNE1-202ENST00000352393 KLRB1Q12918 225 aa18.78■□□□□ 0.6
CPNE1-202ENST00000352393 TTTY13Q9BZ97 58 aa18.78■□□□□ 0.6
CPNE1-202ENST00000352393 HLA-DRB4X5D2U9 266 aa18.78■□□□□ 0.6
CPNE1-202ENST00000352393 ZNF207O43670 478 aaKnown RBP18.77■□□□□ 0.6
CPNE1-202ENST00000352393 SMIM17P0DL12 118 aa18.77■□□□□ 0.6
CPNE1-202ENST00000352393 SMIM15Q7Z3B0 74 aa18.77■□□□□ 0.6
CPNE1-202ENST00000352393 CHAC1Q9BUX1 264 aa18.77■□□□□ 0.6
CPNE1-202ENST00000352393 CENPVL3A0A0U1RRI6 287 aa18.77■□□□□ 0.6
CPNE1-202ENST00000352393 TM4SF20Q53R12 229 aa18.77■□□□□ 0.6
CPNE1-202ENST00000352393 COTL1Q14019 142 aa18.76■□□□□ 0.59
CPNE1-202ENST00000352393 TRAV26-2A0A0B4J265 109 aa18.76■□□□□ 0.59
CPNE1-202ENST00000352393 FXYD2P54710 66 aa18.76■□□□□ 0.59
CPNE1-202ENST00000352393 LAGE3Q14657 143 aa18.76■□□□□ 0.59
CPNE1-202ENST00000352393 Q6ZQT7 251 aa18.76■□□□□ 0.59
CPNE1-202ENST00000352393 RELNP78509 3460 aa18.75■□□□□ 0.59
CPNE1-202ENST00000352393 TMEM8BA6NDV4 472 aa18.75■□□□□ 0.59
CPNE1-202ENST00000352393 SAP30O75446 220 aa18.75■□□□□ 0.59
CPNE1-202ENST00000352393 ZC2HC1BQ5TFG8 222 aa18.75■□□□□ 0.59
CPNE1-202ENST00000352393 GTSCR1Q86UQ5 136 aa18.75■□□□□ 0.59
CPNE1-202ENST00000352393 UFC1Q9Y3C8 167 aa18.75■□□□□ 0.59
CPNE1-202ENST00000352393 C5orf56Q8N8D9 126 aa18.74■□□□□ 0.59
CPNE1-202ENST00000352393 OR5A1Q8NGJ0 315 aa18.74■□□□□ 0.59
CPNE1-202ENST00000352393 GCSHP23434 173 aa18.74■□□□□ 0.59
CPNE1-202ENST00000352393 SPCS1Q9Y6A9 102 aa18.74■□□□□ 0.59
CPNE1-202ENST00000352393 TRBV25-1A0A075B6N4 114 aa18.73■□□□□ 0.59
CPNE1-202ENST00000352393 SMIM13P0DJ93 91 aa18.73■□□□□ 0.59
CPNE1-202ENST00000352393 PRR9Q5T870 116 aa18.73■□□□□ 0.59
CPNE1-202ENST00000352393 RAXQ9Y2V3 346 aa18.73■□□□□ 0.59
CPNE1-202ENST00000352393 MRPL35Q9NZE8 188 aaKnown RBP18.73■□□□□ 0.59
CPNE1-202ENST00000352393 NPFFO15130 113 aa18.72■□□□□ 0.59
CPNE1-202ENST00000352393 SPANXN1Q5VSR9 72 aa18.72■□□□□ 0.59
CPNE1-202ENST00000352393 LMO4P61968 165 aa18.71■□□□□ 0.59
CPNE1-202ENST00000352393 ATP5G2Q06055 141 aa18.71■□□□□ 0.59
CPNE1-202ENST00000352393 MYOZ3Q8TDC0 251 aa18.71■□□□□ 0.59
CPNE1-202ENST00000352393 GLMPQ8WWB7 406 aa18.71■□□□□ 0.59
CPNE1-202ENST00000352393 ITLN2Q8WWU7 325 aaPredicted RBP18.71■□□□□ 0.59
CPNE1-202ENST00000352393 ATP6V0BQ99437 205 aa18.71■□□□□ 0.59
CPNE1-202ENST00000352393 MEGF9Q9H1U4 602 aa18.71■□□□□ 0.59
CPNE1-202ENST00000352393 C19orf54Q5BKX5 351 aa18.71■□□□□ 0.59
CPNE1-202ENST00000352393 SELENOKQ9Y6D0 94 aa18.71■□□□□ 0.59
CPNE1-202ENST00000352393 MED13LQ71F56 2210 aa18.71■□□□□ 0.59
CPNE1-202ENST00000352393 TRAV40A0A0B4J280 105 aa18.7■□□□□ 0.58
CPNE1-202ENST00000352393 H3BVH4 76 aa18.7■□□□□ 0.58
CPNE1-202ENST00000352393 FABP2P12104 132 aa18.7■□□□□ 0.58
CPNE1-202ENST00000352393 C9orf139Q6ZV77 190 aa18.7■□□□□ 0.58
CPNE1-202ENST00000352393 NEGR1Q7Z3B1 354 aa18.7■□□□□ 0.58
CPNE1-202ENST00000352393 MRAP2Q96G30 205 aa18.7■□□□□ 0.58
CPNE1-202ENST00000352393 LENEPQ9Y5L5 61 aa18.7■□□□□ 0.58
CPNE1-202ENST00000352393 A0A087WX48 190 aa18.7■□□□□ 0.58
CPNE1-202ENST00000352393 EFNA4P52798 201 aa18.7■□□□□ 0.58
CPNE1-202ENST00000352393 SAMD5Q5TGI4 173 aa18.7■□□□□ 0.58
CPNE1-202ENST00000352393 PHLDA1Q8WV24 401 aaPredicted RBP18.7■□□□□ 0.58
CPNE1-202ENST00000352393 C16orf92Q96LL3 132 aa18.7■□□□□ 0.58
CPNE1-202ENST00000352393 C20orf173Q96LM9 149 aa18.7■□□□□ 0.58
CPNE1-202ENST00000352393 TM2D2Q9BX73 214 aa18.7■□□□□ 0.58
CPNE1-202ENST00000352393 TMEM160Q9NX00 188 aa18.7■□□□□ 0.58
CPNE1-202ENST00000352393 CACNA1BQ00975 2339 aa18.69■□□□□ 0.58
CPNE1-202ENST00000352393 NBASA2RRP1 2371 aa18.69■□□□□ 0.58
CPNE1-202ENST00000352393 SRSF1Q07955 248 aaKnown RBP eCLIP18.68■□□□□ 0.583e-6■□□□□ 9.1
CPNE1-202ENST00000352393 SMIM2Q9BVW6 85 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms