RNA–Protein interactions for RNA: ENST00000351487.5

UPF3A-201, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 1 (best) BASIC

Gene UPF3A, Length 2,235 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-201ENST00000351487 A6NDX4 124 aa16.9■□□□□ 0.3
UPF3A-201ENST00000351487 C16orf92Q96LL3 132 aa16.9■□□□□ 0.3
UPF3A-201ENST00000351487 LENEPQ9Y5L5 61 aa16.9■□□□□ 0.3
UPF3A-201ENST00000351487 PKD1L2Q7Z442 2459 aa16.9■□□□□ 0.3
UPF3A-201ENST00000351487 COX8AP10176 69 aa16.9■□□□□ 0.3
UPF3A-201ENST00000351487 USMG5Q96IX5 58 aa16.9■□□□□ 0.3
UPF3A-201ENST00000351487 IGHV7-4-1A0A0J9YVY3 117 aa16.89■□□□□ 0.29
UPF3A-201ENST00000351487 TRBV12-3P01733 135 aa16.89■□□□□ 0.29
UPF3A-201ENST00000351487 MPV17L2Q567V2 206 aa16.89■□□□□ 0.29
UPF3A-201ENST00000351487 UNQ9165/PRO28630Q6UXU0 137 aa16.89■□□□□ 0.29
UPF3A-201ENST00000351487 COX11Q9Y6N1 276 aa16.89■□□□□ 0.29
UPF3A-201ENST00000351487 ATP5J2P56134 94 aa16.88■□□□□ 0.29
UPF3A-201ENST00000351487 IFI27L1Q96BM0 104 aa16.88■□□□□ 0.29
UPF3A-201ENST00000351487 NXT2Q9NPJ8 142 aaKnown RBP16.88■□□□□ 0.29
UPF3A-201ENST00000351487 IGHV4-30-2A0A087WSY4 118 aa16.88■□□□□ 0.29
UPF3A-201ENST00000351487 H3BUX3 64 aa16.88■□□□□ 0.29
UPF3A-201ENST00000351487 SMAD7O15105 426 aaKnown RBP16.88■□□□□ 0.29
UPF3A-201ENST00000351487 TNFRSF6BO95407 300 aa16.88■□□□□ 0.29
UPF3A-201ENST00000351487 GPHB5Q86YW7 130 aa16.88■□□□□ 0.29
UPF3A-201ENST00000351487 IGHV4-4A0A075B6R2 117 aa16.87■□□□□ 0.29
UPF3A-201ENST00000351487 GAS8-AS1O95177 125 aa16.87■□□□□ 0.29
UPF3A-201ENST00000351487 MSMBP08118 114 aa16.87■□□□□ 0.29
UPF3A-201ENST00000351487 FXYD7P58549 80 aa16.87■□□□□ 0.29
UPF3A-201ENST00000351487 FOXE3Q13461 319 aa16.87■□□□□ 0.29
UPF3A-201ENST00000351487 LY6EQ16553 131 aa16.87■□□□□ 0.29
UPF3A-201ENST00000351487 C12orf54Q6X4T0 127 aa16.87■□□□□ 0.29
UPF3A-201ENST00000351487 C20orf173Q96LM9 149 aa16.87■□□□□ 0.29
UPF3A-201ENST00000351487 SOCS3O14543 225 aa16.86■□□□□ 0.29
UPF3A-201ENST00000351487 SNAI2O43623 268 aa16.86■□□□□ 0.29
UPF3A-201ENST00000351487 NUDT3O95989 172 aa16.86■□□□□ 0.29
UPF3A-201ENST00000351487 CACNG7P62955 275 aa16.86■□□□□ 0.29
UPF3A-201ENST00000351487 BVES-AS1Q5T3Y7 98 aa16.86■□□□□ 0.29
UPF3A-201ENST00000351487 ZNF738Q8NE65 137 aa16.86■□□□□ 0.29
UPF3A-201ENST00000351487 OR1N2Q8NGR9 330 aa16.85■□□□□ 0.29
UPF3A-201ENST00000351487 SPTAN1Q13813 2472 aaKnown RBP16.84■□□□□ 0.29
UPF3A-201ENST00000351487 C2orf91Q6ZV80 131 aa16.84■□□□□ 0.29
UPF3A-201ENST00000351487 LINC00477Q96M19 166 aa16.84■□□□□ 0.29
UPF3A-201ENST00000351487 FCER1GP30273 86 aa16.84■□□□□ 0.29
UPF3A-201ENST00000351487 PRR9Q5T870 116 aa16.84■□□□□ 0.29
UPF3A-201ENST00000351487 FGF6P10767 208 aa16.83■□□□□ 0.28
UPF3A-201ENST00000351487 EVI2AP22794 236 aa16.83■□□□□ 0.28
UPF3A-201ENST00000351487 ANKRD39Q53RE8 183 aa16.83■□□□□ 0.28
UPF3A-201ENST00000351487 Q6ZVH6 145 aa16.83■□□□□ 0.28
UPF3A-201ENST00000351487 DEFB125Q8N687 156 aa16.83■□□□□ 0.28
UPF3A-201ENST00000351487 OVOL1O14753 267 aa16.82■□□□□ 0.28
UPF3A-201ENST00000351487 SMIM15Q7Z3B0 74 aa16.82■□□□□ 0.28
UPF3A-201ENST00000351487 KLK15Q9H2R5 256 aa16.82■□□□□ 0.28
UPF3A-201ENST00000351487 IGLV2-18A0A075B6J9 118 aa16.82■□□□□ 0.28
UPF3A-201ENST00000351487 PRSS47A8MTI9 375 aa16.82■□□□□ 0.28
UPF3A-201ENST00000351487 IGLV1-40P01703 118 aa16.82■□□□□ 0.28
UPF3A-201ENST00000351487 Q6ZQT7 251 aa16.82■□□□□ 0.28
UPF3A-201ENST00000351487 ZFAND2AQ8N6M9 145 aa16.82■□□□□ 0.28
UPF3A-201ENST00000351487 Q8N8P6 123 aa16.82■□□□□ 0.28
UPF3A-201ENST00000351487 GATA1P15976 413 aaPredicted RBP16.81■□□□□ 0.28
UPF3A-201ENST00000351487 BLCAPP62952 87 aa16.81■□□□□ 0.28
UPF3A-201ENST00000351487 IGHV3-11P01762 117 aa16.81■□□□□ 0.28
UPF3A-201ENST00000351487 PF4V1P10720 104 aa16.81■□□□□ 0.28
UPF3A-201ENST00000351487 LEPP41159 167 aa16.81■□□□□ 0.28
UPF3A-201ENST00000351487 OR4X2Q8NGF9 303 aa16.81■□□□□ 0.28
UPF3A-201ENST00000351487 OR2K2Q8NGT1 345 aa16.81■□□□□ 0.28
UPF3A-201ENST00000351487 OR10J6PQ8NGY7 276 aa16.81■□□□□ 0.28
UPF3A-201ENST00000351487 CACNA1AO00555 2505 aa16.8■□□□□ 0.28
UPF3A-201ENST00000351487 DOPEY1Q5JWR5 2465 aa16.8■□□□□ 0.28
UPF3A-201ENST00000351487 A0A0G2JLM5 398 aa16.8■□□□□ 0.28
UPF3A-201ENST00000351487 CFHR3Q02985 330 aa16.8■□□□□ 0.28
UPF3A-201ENST00000351487 NRACQ8N912 160 aa16.8■□□□□ 0.28
UPF3A-201ENST00000351487 ZNF580Q9UK33 172 aa16.8■□□□□ 0.28
UPF3A-201ENST00000351487 B4DSR2 109 aa16.79■□□□□ 0.28
UPF3A-201ENST00000351487 SPANXN1Q5VSR9 72 aa16.79■□□□□ 0.28
UPF3A-201ENST00000351487 Q6ZS46 218 aa16.79■□□□□ 0.28
UPF3A-201ENST00000351487 BOD1L2Q8IYS8 172 aa16.78■□□□□ 0.28
UPF3A-201ENST00000351487 H3BVH4 76 aa16.78■□□□□ 0.28
UPF3A-201ENST00000351487 FAM19A4Q96LR4 140 aa16.78■□□□□ 0.28
UPF3A-201ENST00000351487 UFC1Q9Y3C8 167 aa16.78■□□□□ 0.28
UPF3A-201ENST00000351487 TRAV21A0A0B4J279 112 aa16.77■□□□□ 0.28
UPF3A-201ENST00000351487 TMEM8BA6NDV4 472 aa16.77■□□□□ 0.28
UPF3A-201ENST00000351487 TAX1BP3O14907 124 aa16.77■□□□□ 0.28
UPF3A-201ENST00000351487 UBE2V1Q13404 147 aa16.77■□□□□ 0.28
UPF3A-201ENST00000351487 PIEZO1Q92508 2521 aa16.77■□□□□ 0.27
UPF3A-201ENST00000351487 CCL25O15444 150 aa16.77■□□□□ 0.27
UPF3A-201ENST00000351487 AVPP01185 164 aa16.77■□□□□ 0.27
UPF3A-201ENST00000351487 GATA3P23771 443 aa16.77■□□□□ 0.27
UPF3A-201ENST00000351487 APRG1Q8IVJ8 170 aa16.77■□□□□ 0.27
UPF3A-201ENST00000351487 C18orf15Q96N68 181 aa16.77■□□□□ 0.27
UPF3A-201ENST00000351487 CFAP46Q8IYW2 2715 aa16.77■□□□□ 0.27
UPF3A-201ENST00000351487 TRBV7-9A0A0J9YWB2 115 aa16.76■□□□□ 0.27
UPF3A-201ENST00000351487 WFDC3Q8IUB2 231 aa16.76■□□□□ 0.27
UPF3A-201ENST00000351487 SPOCK3Q9BQ16 436 aa16.76■□□□□ 0.27
UPF3A-201ENST00000351487 DKK2Q9UBU2 259 aa16.76■□□□□ 0.27
UPF3A-201ENST00000351487 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.76■□□□□ 0.272e-8■■■■□ 23.5
UPF3A-201ENST00000351487 PTTG1IPP53801 180 aa16.76■□□□□ 0.27
UPF3A-201ENST00000351487 TMEM158Q8WZ71 300 aa16.76■□□□□ 0.27
UPF3A-201ENST00000351487 MRAP2Q96G30 205 aa16.76■□□□□ 0.27
UPF3A-201ENST00000351487 RHPN1-AS1Q9BWJ2 59 aa16.76■□□□□ 0.27
UPF3A-201ENST00000351487 ZMAT4Q9H898 229 aa16.76■□□□□ 0.27
UPF3A-201ENST00000351487 DAZ1Q9NQZ3 744 aaKnown RBP16.76■□□□□ 0.27
UPF3A-201ENST00000351487 ZFHX3Q15911 3703 aa16.75■□□□□ 0.27
UPF3A-201ENST00000351487 DSCR9P59020 149 aa16.75■□□□□ 0.27
UPF3A-201ENST00000351487 ODF1Q14990 250 aa16.75■□□□□ 0.27
UPF3A-201ENST00000351487 CD5LO43866 347 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms