RNA–Protein interactions for RNA: ENST00000346495.6

TSPAN3-202, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-202ENST00000346495 ATP5L2Q7Z4Y8 100 aa16.07■□□□□ 0.16
TSPAN3-202ENST00000346495 FRZBQ92765 325 aa16.07■□□□□ 0.16
TSPAN3-202ENST00000346495 FAM19A4Q96LR4 140 aa16.07■□□□□ 0.16
TSPAN3-202ENST00000346495 GNB1LQ9BYB4 327 aa16.07■□□□□ 0.16
TSPAN3-202ENST00000346495 LOC105371267A0A1B0GV96 52 aa16.06■□□□□ 0.16
TSPAN3-202ENST00000346495 FABP9Q0Z7S8 132 aa16.06■□□□□ 0.16
TSPAN3-202ENST00000346495 PGLYRP4Q96LB8 373 aa16.06■□□□□ 0.16
TSPAN3-202ENST00000346495 FLNBO75369 2602 aaKnown RBP16.06■□□□□ 0.16
TSPAN3-202ENST00000346495 S100A6P06703 90 aa16.05■□□□□ 0.16
TSPAN3-202ENST00000346495 TRGC1P0CF51 173 aa16.05■□□□□ 0.16
TSPAN3-202ENST00000346495 Q6AWC8 147 aa16.05■□□□□ 0.16
TSPAN3-202ENST00000346495 EBLN2Q6P2I7 272 aa16.05■□□□□ 0.16
TSPAN3-202ENST00000346495 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP16.05■□□□□ 0.16
TSPAN3-202ENST00000346495 A0A0J9YX75 114 aa16.05■□□□□ 0.16
TSPAN3-202ENST00000346495 SNURFLB1AK76 121 aa16.05■□□□□ 0.16
TSPAN3-202ENST00000346495 MT-ND6P03923 174 aa16.05■□□□□ 0.16
TSPAN3-202ENST00000346495 CD300EQ496F6 205 aaPredicted RBP16.05■□□□□ 0.16
TSPAN3-202ENST00000346495 ZFAND2AQ8N6M9 145 aa16.05■□□□□ 0.16
TSPAN3-202ENST00000346495 SPAG8Q99932 426 aaPredicted RBP16.05■□□□□ 0.16
TSPAN3-202ENST00000346495 HIST1H2BKO60814 126 aa16.04■□□□□ 0.16
TSPAN3-202ENST00000346495 ORM1P02763 201 aa16.04■□□□□ 0.16
TSPAN3-202ENST00000346495 HIST1H2BJP06899 126 aa16.04■□□□□ 0.16
TSPAN3-202ENST00000346495 FRMD6-AS1P0C7T7 363 aa16.04■□□□□ 0.16
TSPAN3-202ENST00000346495 CRISP2P16562 243 aa16.04■□□□□ 0.16
TSPAN3-202ENST00000346495 HIST1H2BOP23527 126 aa16.04■□□□□ 0.16
TSPAN3-202ENST00000346495 HIST1H2BBP33778 126 aa16.04■□□□□ 0.16
TSPAN3-202ENST00000346495 HIST1H2BDP58876 126 aa16.04■□□□□ 0.16
TSPAN3-202ENST00000346495 HIST1H2BCP62807 126 aa16.04■□□□□ 0.16
TSPAN3-202ENST00000346495 HIST2H2BEQ16778 126 aa16.04■□□□□ 0.16
TSPAN3-202ENST00000346495 LINC01559Q495D7 138 aa16.04■□□□□ 0.16
TSPAN3-202ENST00000346495 HIST2H2BFQ5QNW6 126 aaPredicted RBP16.04■□□□□ 0.16
TSPAN3-202ENST00000346495 HIST1H2BHQ93079 126 aa16.04■□□□□ 0.16
TSPAN3-202ENST00000346495 HIST1H2BNQ99877 126 aa16.04■□□□□ 0.16
TSPAN3-202ENST00000346495 HIST1H2BMQ99879 126 aa16.04■□□□□ 0.16
TSPAN3-202ENST00000346495 BAHCC1Q9P281 2608 aa16.03■□□□□ 0.16
TSPAN3-202ENST00000346495 TMSB15BA0A087X1C1 80 aa16.03■□□□□ 0.16
TSPAN3-202ENST00000346495 OR4C46A6NHA9 309 aa16.03■□□□□ 0.16
TSPAN3-202ENST00000346495 CYSRT1A8MQ03 144 aa16.03■□□□□ 0.16
TSPAN3-202ENST00000346495 DUSP14O95147 198 aaKnown RBP16.03■□□□□ 0.16
TSPAN3-202ENST00000346495 FOXI2Q6ZQN5 318 aa16.03■□□□□ 0.16
TSPAN3-202ENST00000346495 TMEM136Q6ZRR5 245 aa16.03■□□□□ 0.16
TSPAN3-202ENST00000346495 APRG1Q8IVJ8 170 aa16.03■□□□□ 0.16
TSPAN3-202ENST00000346495 ODF3Q96PU9 254 aa16.03■□□□□ 0.16
TSPAN3-202ENST00000346495 MRPL18Q9H0U6 180 aaKnown RBP16.03■□□□□ 0.16
TSPAN3-202ENST00000346495 GDF5OSQ5U4N7 250 aa16.02■□□□□ 0.16
TSPAN3-202ENST00000346495 A0A1B0GXF2 115 aa16.01■□□□□ 0.15
TSPAN3-202ENST00000346495 HLA-DQA1P01909 254 aa16.01■□□□□ 0.15
TSPAN3-202ENST00000346495 GPX1P07203 203 aa16.01■□□□□ 0.15
TSPAN3-202ENST00000346495 CD33P20138 364 aa16.01■□□□□ 0.15
TSPAN3-202ENST00000346495 RAB4BP61018 213 aa16.01■□□□□ 0.15
TSPAN3-202ENST00000346495 PRR9Q5T870 116 aa16.01■□□□□ 0.15
TSPAN3-202ENST00000346495 TRAV21A0A0B4J279 112 aa16.01■□□□□ 0.15
TSPAN3-202ENST00000346495 HBBP68871 147 aa16.01■□□□□ 0.15
TSPAN3-202ENST00000346495 BORCS7Q96B45 105 aa16.01■□□□□ 0.15
TSPAN3-202ENST00000346495 SETXQ7Z333 2677 aaKnown RBP16■□□□□ 0.15
TSPAN3-202ENST00000346495 F8P00451 2351 aa16■□□□□ 0.15
TSPAN3-202ENST00000346495 LEPP41159 167 aa16■□□□□ 0.15
TSPAN3-202ENST00000346495 DEFB131AP59861 70 aa16■□□□□ 0.15
TSPAN3-202ENST00000346495 A0A1B0GUT8 65 aa15.99■□□□□ 0.15
TSPAN3-202ENST00000346495 J3KRW8 73 aa15.99■□□□□ 0.15
TSPAN3-202ENST00000346495 SAP30O75446 220 aa15.99■□□□□ 0.15
TSPAN3-202ENST00000346495 PF4P02776 101 aa15.99■□□□□ 0.15
TSPAN3-202ENST00000346495 RIGQ13278 110 aa15.99■□□□□ 0.15
TSPAN3-202ENST00000346495 KLLNB2CW77 178 aa15.98■□□□□ 0.15
TSPAN3-202ENST00000346495 RNASE4P34096 147 aaKnown RBP15.98■□□□□ 0.15
TSPAN3-202ENST00000346495 NDUFA6P56556 154 aa15.98■□□□□ 0.15
TSPAN3-202ENST00000346495 TPPP3Q9BW30 176 aa15.98■□□□□ 0.15
TSPAN3-202ENST00000346495 C11orf21Q9P2W6 132 aa15.98■□□□□ 0.15
TSPAN3-202ENST00000346495 ZNF256Q9Y2P7 627 aaPredicted RBP15.98■□□□□ 0.15
TSPAN3-202ENST00000346495 IGKV3D-20A0A0C4DH25 116 aa15.97■□□□□ 0.15
TSPAN3-202ENST00000346495 C5orf52A6NGY3 159 aa15.97■□□□□ 0.15
TSPAN3-202ENST00000346495 CAMPP49913 170 aa15.97■□□□□ 0.15
TSPAN3-202ENST00000346495 SNRPEP62304 92 aaKnown RBP15.97■□□□□ 0.15
TSPAN3-202ENST00000346495 ZNF575Q86XF7 245 aa15.97■□□□□ 0.15
TSPAN3-202ENST00000346495 FER1L6-AS1Q8NA97 138 aa15.97■□□□□ 0.15
TSPAN3-202ENST00000346495 MAP6D1Q9H9H5 199 aa15.97■□□□□ 0.15
TSPAN3-202ENST00000346495 A0A1B0GW15 77 aa15.97■□□□□ 0.15
TSPAN3-202ENST00000346495 IGLC6P0CF74 106 aa15.97■□□□□ 0.15
TSPAN3-202ENST00000346495 TSPOP30536 169 aa15.97■□□□□ 0.15
TSPAN3-202ENST00000346495 LYZL1Q6UWQ5 148 aa15.97■□□□□ 0.15
TSPAN3-202ENST00000346495 OR2K2Q8NGT1 345 aa15.97■□□□□ 0.15
TSPAN3-202ENST00000346495 GRIFINA4D1Z8 144 aa15.96■□□□□ 0.15
TSPAN3-202ENST00000346495 S100A8P05109 93 aa15.96■□□□□ 0.15
TSPAN3-202ENST00000346495 ARMS2P0C7Q2 107 aa15.96■□□□□ 0.15
TSPAN3-202ENST00000346495 CTRLP40313 264 aa15.96■□□□□ 0.15
TSPAN3-202ENST00000346495 APCSP02743 223 aa15.95■□□□□ 0.14
TSPAN3-202ENST00000346495 HLA-DRB4P13762 266 aa15.95■□□□□ 0.14
TSPAN3-202ENST00000346495 LINC00482Q8N8I6 264 aa15.95■□□□□ 0.14
TSPAN3-202ENST00000346495 CITED1Q99966 193 aa15.95■□□□□ 0.14
TSPAN3-202ENST00000346495 HLA-DRB4X5D2U9 266 aa15.95■□□□□ 0.14
TSPAN3-202ENST00000346495 C2CD3Q4AC94 2353 aa15.95■□□□□ 0.14
TSPAN3-202ENST00000346495 IGKV3-20P01619 116 aa15.94■□□□□ 0.14
TSPAN3-202ENST00000346495 IGLV1-51P01701 117 aa15.94■□□□□ 0.14
TSPAN3-202ENST00000346495 Q6ZQT7 251 aa15.94■□□□□ 0.14
TSPAN3-202ENST00000346495 KNCNA6PVL3 124 aa15.94■□□□□ 0.14
TSPAN3-202ENST00000346495 A8MTW9 85 aa15.94■□□□□ 0.14
TSPAN3-202ENST00000346495 F2Z2F3 143 aa15.94■□□□□ 0.14
TSPAN3-202ENST00000346495 KIR3DS1Q14943 382 aa15.94■□□□□ 0.14
TSPAN3-202ENST00000346495 C7orf71A4D174 169 aa15.93■□□□□ 0.14
TSPAN3-202ENST00000346495 CDKN1BP46527 198 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms