RNA–Protein interactions for RNA: ENST00000344824.10

TPM4-202, Transcript of tropomyosin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TPM4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-202ENST00000344824 TENM2Q9NT68 2774 aa10.08□□□□□ -0.8
TPM4-202ENST00000344824 TRBV20OR9-2A0A075B6H5 130 aa10.08□□□□□ -0.8
TPM4-202ENST00000344824 NPIPB6E9PJ23 425 aa10.08□□□□□ -0.8
TPM4-202ENST00000344824 J3KRW8 73 aa10.08□□□□□ -0.8
TPM4-202ENST00000344824 S100A9P06702 114 aaKnown RBP10.08□□□□□ -0.8
TPM4-202ENST00000344824 MGST1P10620 155 aaKnown RBP10.08□□□□□ -0.8
TPM4-202ENST00000344824 ZNF138P52744 262 aa10.08□□□□□ -0.8
TPM4-202ENST00000344824 TAS2R60P59551 318 aa10.08□□□□□ -0.8
TPM4-202ENST00000344824 C9orf47Q6ZRZ4 202 aa10.08□□□□□ -0.8
TPM4-202ENST00000344824 C8orf49Q96NF6 230 aa10.08□□□□□ -0.8
TPM4-202ENST00000344824 PPP1R14DQ9NXH3 145 aa10.08□□□□□ -0.8
TPM4-202ENST00000344824 KLF12Q9Y4X4 402 aa10.08□□□□□ -0.8
TPM4-202ENST00000344824 DUSP14O95147 198 aaKnown RBP10.07□□□□□ -0.8
TPM4-202ENST00000344824 CT45A10P0DMU9 189 aa10.07□□□□□ -0.8
TPM4-202ENST00000344824 HLA-DRB4P13762 266 aa10.07□□□□□ -0.8
TPM4-202ENST00000344824 TMEM241Q24JQ0 296 aa10.07□□□□□ -0.8
TPM4-202ENST00000344824 FAM74A3Q4VXF1 159 aa10.07□□□□□ -0.8
TPM4-202ENST00000344824 TRPT1Q86TN4 253 aaKnown RBP10.07□□□□□ -0.8
TPM4-202ENST00000344824 NIPSNAP3BQ9BS92 247 aa10.07□□□□□ -0.8
TPM4-202ENST00000344824 NDFIP1Q9BT67 221 aa10.07□□□□□ -0.8
TPM4-202ENST00000344824 SEC11CQ9BY50 192 aa10.07□□□□□ -0.8
TPM4-202ENST00000344824 ZNF492Q9P255 531 aa10.07□□□□□ -0.8
TPM4-202ENST00000344824 HLA-DRB4X5D2U9 266 aa10.07□□□□□ -0.8
TPM4-202ENST00000344824 RYR3Q15413 4870 aa10.07□□□□□ -0.8
TPM4-202ENST00000344824 KRBOX1C9JBD0 128 aa10.07□□□□□ -0.8
TPM4-202ENST00000344824 H3BMM0 161 aa10.07□□□□□ -0.8
TPM4-202ENST00000344824 LTAP01374 205 aa10.07□□□□□ -0.8
TPM4-202ENST00000344824 FXYD7P58549 80 aa10.07□□□□□ -0.8
TPM4-202ENST00000344824 ADIRFQ15847 76 aa10.07□□□□□ -0.8
TPM4-202ENST00000344824 TVP23CQ96ET8 276 aa10.07□□□□□ -0.8
TPM4-202ENST00000344824 LINC00477Q96M19 166 aa10.07□□□□□ -0.8
TPM4-202ENST00000344824 NAT8Q9UHE5 227 aa10.07□□□□□ -0.8
TPM4-202ENST00000344824 TRBV6-1A0A0K0K1D8 114 aa10.06□□□□□ -0.8
TPM4-202ENST00000344824 C9JCJ5 164 aa10.06□□□□□ -0.8
TPM4-202ENST00000344824 APOC3P02656 99 aa10.06□□□□□ -0.8
TPM4-202ENST00000344824 PRR27Q6MZM9 219 aa10.06□□□□□ -0.8
TPM4-202ENST00000344824 OR11H2Q8NH07 326 aa10.06□□□□□ -0.8
TPM4-202ENST00000344824 IL17DQ8TAD2 202 aa10.06□□□□□ -0.8
TPM4-202ENST00000344824 OCC1Q8TAD7 63 aa10.06□□□□□ -0.8
TPM4-202ENST00000344824 FBLL1A6NHQ2 334 aaKnown RBP10.05□□□□□ -0.8
TPM4-202ENST00000344824 M0R036 132 aa10.05□□□□□ -0.8
TPM4-202ENST00000344824 IGLV2-8P01709 118 aa10.05□□□□□ -0.8
TPM4-202ENST00000344824 RPL23P62829 140 aaKnown RBP10.05□□□□□ -0.8
TPM4-202ENST00000344824 OR5I1Q13606 314 aa10.05□□□□□ -0.8
TPM4-202ENST00000344824 MORN3Q6PF18 240 aaPredicted RBP10.05□□□□□ -0.8
TPM4-202ENST00000344824 SDF2L1Q9HCN8 221 aa10.05□□□□□ -0.8
TPM4-202ENST00000344824 ZFP30Q9Y2G7 519 aa10.05□□□□□ -0.8
TPM4-202ENST00000344824 CXorf65A6NEN9 183 aa10.04□□□□□ -0.8
TPM4-202ENST00000344824 K7EN84 100 aa10.04□□□□□ -0.8
TPM4-202ENST00000344824 M0R2Z0 102 aa10.04□□□□□ -0.8
TPM4-202ENST00000344824 DEFB4AO15263 64 aa10.04□□□□□ -0.8
TPM4-202ENST00000344824 SPINK13Q1W4C9 94 aa10.04□□□□□ -0.8
TPM4-202ENST00000344824 SAPCD1Q5SSQ6 148 aa10.04□□□□□ -0.8
TPM4-202ENST00000344824 C10orf91Q5T1B1 145 aa10.04□□□□□ -0.8
TPM4-202ENST00000344824 LINC01551Q86U37 167 aa10.04□□□□□ -0.8
TPM4-202ENST00000344824 TMEM183AQ8IXX5 376 aa10.04□□□□□ -0.8
TPM4-202ENST00000344824 ZC2HC1AQ96GY0 325 aa10.04□□□□□ -0.8
TPM4-202ENST00000344824 CARHSP1Q9Y2V2 147 aaKnown RBP10.04□□□□□ -0.8
TPM4-202ENST00000344824 DYNC2H1Q8NCM8 4307 aaKnown RBP10.03□□□□□ -0.8
TPM4-202ENST00000344824 LEPP41159 167 aa10.03□□□□□ -0.8
TPM4-202ENST00000344824 KIR3DS1Q14943 382 aa10.03□□□□□ -0.8
TPM4-202ENST00000344824 SMUG1Q53HV7 270 aa10.03□□□□□ -0.8
TPM4-202ENST00000344824 PRR9Q5T870 116 aa10.03□□□□□ -0.8
TPM4-202ENST00000344824 TRAV12-2A0A075B6T6 113 aa10.02□□□□□ -0.81
TPM4-202ENST00000344824 GCGP01275 180 aa10.02□□□□□ -0.81
TPM4-202ENST00000344824 GPX1P07203 203 aa10.02□□□□□ -0.81
TPM4-202ENST00000344824 RNASE4P34096 147 aaKnown RBP10.02□□□□□ -0.81
TPM4-202ENST00000344824 NUTF2P61970 127 aaKnown RBP10.02□□□□□ -0.81
TPM4-202ENST00000344824 BTN1A1Q13410 526 aa10.02□□□□□ -0.81
TPM4-202ENST00000344824 AMTNQ6UX39 209 aa10.02□□□□□ -0.81
TPM4-202ENST00000344824 LYSTQ99698 3801 aa10.02□□□□□ -0.81
TPM4-202ENST00000344824 MLST8Q9BVC4 326 aa10.02□□□□□ -0.81
TPM4-202ENST00000344824 XCL2Q9UBD3 114 aa10.02□□□□□ -0.81
TPM4-202ENST00000344824 LY96Q9Y6Y9 160 aa10.02□□□□□ -0.81
TPM4-202ENST00000344824 RYR2Q92736 4967 aa10.02□□□□□ -0.81
TPM4-202ENST00000344824 ZNF80P51504 273 aaPredicted RBP10.01□□□□□ -0.81
TPM4-202ENST00000344824 ZFAND2AQ8N6M9 145 aa10.01□□□□□ -0.81
TPM4-202ENST00000344824 FAM19A4Q96LR4 140 aa10.01□□□□□ -0.81
TPM4-202ENST00000344824 LENEPQ9Y5L5 61 aa10.01□□□□□ -0.81
TPM4-202ENST00000344824 A8MTW9 85 aa10□□□□□ -0.81
TPM4-202ENST00000344824 TSPOP30536 169 aa10□□□□□ -0.81
TPM4-202ENST00000344824 CDKN1BP46527 198 aa10□□□□□ -0.81
TPM4-202ENST00000344824 PNRC1Q12796 327 aaPredicted RBP10□□□□□ -0.81
TPM4-202ENST00000344824 Q6ZQT7 251 aa10□□□□□ -0.81
TPM4-202ENST00000344824 SVBPQ8N300 66 aa10□□□□□ -0.81
TPM4-202ENST00000344824 ISOC2Q96AB3 205 aa10□□□□□ -0.81
TPM4-202ENST00000344824 SMIM12Q96EX1 92 aa10□□□□□ -0.81
TPM4-202ENST00000344824 ODF3Q96PU9 254 aa10□□□□□ -0.81
TPM4-202ENST00000344824 C1QTNF4Q9BXJ3 329 aa10□□□□□ -0.81
TPM4-202ENST00000344824 RNASE7Q9H1E1 156 aaKnown RBP10□□□□□ -0.81
TPM4-202ENST00000344824 PLECQ15149 4684 aaKnown RBP10□□□□□ -0.81
TPM4-202ENST00000344824 IGHV3OR16-12A0A075B7B8 117 aa9.99□□□□□ -0.81
TPM4-202ENST00000344824 TRAV12-3A0A0B4J271 114 aa9.99□□□□□ -0.81
TPM4-202ENST00000344824 SH2D1AO60880 128 aa9.99□□□□□ -0.81
TPM4-202ENST00000344824 GIG44P09565 113 aaPredicted RBP9.99□□□□□ -0.81
TPM4-202ENST00000344824 CRISP2P16562 243 aa9.99□□□□□ -0.81
TPM4-202ENST00000344824 S100A1P23297 94 aa9.99□□□□□ -0.81
TPM4-202ENST00000344824 ERVFC1-1P60608 527 aa9.99□□□□□ -0.81
TPM4-202ENST00000344824 CLRN3Q8NCR9 226 aa9.99□□□□□ -0.81
TPM4-202ENST00000344824 DAZAP1Q96EP5 407 aaKnown RBP9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms