RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 RBX1P62877 108 aa14.31□□□□□ -0.12
SMC4-201ENST00000344722 TMEM126AQ9H061 195 aa14.31□□□□□ -0.12
SMC4-201ENST00000344722 DTX1Q86Y01 620 aa14.31□□□□□ -0.12
SMC4-201ENST00000344722 C17orf77Q96MU5 243 aa14.31□□□□□ -0.12
SMC4-201ENST00000344722 THSD7BQ9C0I4 1608 aa14.3□□□□□ -0.12
SMC4-201ENST00000344722 UBL5Q9BZL1 73 aa14.3□□□□□ -0.12
SMC4-201ENST00000344722 RHODO00212 210 aa14.3□□□□□ -0.12
SMC4-201ENST00000344722 TRGV1A0A0A0MS02 117 aa14.3□□□□□ -0.12
SMC4-201ENST00000344722 RBAKDNA6NC62 111 aa14.29□□□□□ -0.12
SMC4-201ENST00000344722 SRSF2Q01130 221 aaKnown RBP14.29□□□□□ -0.12
SMC4-201ENST00000344722 FAM167A-AS1Q96KT0 104 aa14.29□□□□□ -0.12
SMC4-201ENST00000344722 CHD3Q12873 2000 aaKnown RBP14.29□□□□□ -0.12
SMC4-201ENST00000344722 C8orf31Q8N9H6 132 aa14.29□□□□□ -0.12
SMC4-201ENST00000344722 RNF138Q8WVD3 245 aa14.29□□□□□ -0.12
SMC4-201ENST00000344722 IGHV1-69DA0A0B4J2H0 117 aa14.28□□□□□ -0.12
SMC4-201ENST00000344722 LOXP28300 417 aaPredicted RBP14.28□□□□□ -0.12
SMC4-201ENST00000344722 IGLV1-44P01699 117 aa14.28□□□□□ -0.12
SMC4-201ENST00000344722 COL8A2P25067 703 aa14.28□□□□□ -0.12
SMC4-201ENST00000344722 SPATA12Q7Z6I5 190 aa14.28□□□□□ -0.12
SMC4-201ENST00000344722 PATE2Q6UY27 113 aa14.28□□□□□ -0.12
SMC4-201ENST00000344722 C11orf53Q8IXP5 236 aa14.28□□□□□ -0.12
SMC4-201ENST00000344722 PLXNB3Q9ULL4 1909 aa14.28□□□□□ -0.12
SMC4-201ENST00000344722 INSP01308 110 aa14.27□□□□□ -0.12
SMC4-201ENST00000344722 TRAV13-2A0A0B4J235 113 aa14.27□□□□□ -0.12
SMC4-201ENST00000344722 ATP6V0E1O15342 81 aa14.27□□□□□ -0.12
SMC4-201ENST00000344722 PF4P02776 101 aa14.27□□□□□ -0.12
SMC4-201ENST00000344722 TCTEX1D4Q5JR98 221 aa14.27□□□□□ -0.12
SMC4-201ENST00000344722 IGLV2-14P01704 120 aa14.27□□□□□ -0.13
SMC4-201ENST00000344722 TRAV12-1A0A0B4J245 112 aa14.26□□□□□ -0.13
SMC4-201ENST00000344722 A0A0G2JNJ9 132 aa14.26□□□□□ -0.13
SMC4-201ENST00000344722 CD59P13987 128 aa14.26□□□□□ -0.13
SMC4-201ENST00000344722 CMC4P56277 68 aaPredicted RBP14.26□□□□□ -0.13
SMC4-201ENST00000344722 CFHR4Q92496 578 aa14.26□□□□□ -0.13
SMC4-201ENST00000344722 Q9UFV3 132 aa14.26□□□□□ -0.13
SMC4-201ENST00000344722 ODF3L1Q8IXM7 274 aa14.26□□□□□ -0.13
SMC4-201ENST00000344722 CTRLP40313 264 aa14.26□□□□□ -0.13
SMC4-201ENST00000344722 DIAPH2-AS1Q14236 149 aa14.26□□□□□ -0.13
SMC4-201ENST00000344722 GATA1P15976 413 aaPredicted RBP14.25□□□□□ -0.13
SMC4-201ENST00000344722 RHOHQ15669 191 aa14.25□□□□□ -0.13
SMC4-201ENST00000344722 MRPL53Q96EL3 112 aaKnown RBP14.25□□□□□ -0.13
SMC4-201ENST00000344722 ANAPC1Q9H1A4 1944 aa14.25□□□□□ -0.13
SMC4-201ENST00000344722 IGHV1OR15-1A0A075B7D0 117 aa14.25□□□□□ -0.13
SMC4-201ENST00000344722 OVOL3O00110 214 aa14.25□□□□□ -0.13
SMC4-201ENST00000344722 DYNAPQ8N1N2 210 aa14.25□□□□□ -0.13
SMC4-201ENST00000344722 ICE1Q9Y2F5 2266 aa14.25□□□□□ -0.13
SMC4-201ENST00000344722 KMT2EQ8IZD2 1858 aa14.24□□□□□ -0.13
SMC4-201ENST00000344722 CR1LQ2VPA4 569 aa14.24□□□□□ -0.13
SMC4-201ENST00000344722 IGLV3-9A0A075B6K5 115 aa14.24□□□□□ -0.13
SMC4-201ENST00000344722 COL4A6Q14031 1691 aa14.24□□□□□ -0.13
SMC4-201ENST00000344722 DOCK8Q8NF50 2099 aa14.24□□□□□ -0.13
SMC4-201ENST00000344722 PTPRZ1P23471 2315 aaPredicted RBP14.24□□□□□ -0.13
SMC4-201ENST00000344722 LENEPQ9Y5L5 61 aa14.23□□□□□ -0.13
SMC4-201ENST00000344722 PRSS47A8MTI9 375 aa14.23□□□□□ -0.13
SMC4-201ENST00000344722 COLQQ9Y215 455 aaPredicted RBP14.23□□□□□ -0.13
SMC4-201ENST00000344722 CEP290O15078 2479 aa14.23□□□□□ -0.13
SMC4-201ENST00000344722 IGHV3-53P01767 116 aa14.22□□□□□ -0.13
SMC4-201ENST00000344722 RBMY1FQ15415 496 aaKnown RBP14.22□□□□□ -0.13
SMC4-201ENST00000344722 LINC01620Q4KN68 170 aa14.22□□□□□ -0.13
SMC4-201ENST00000344722 COL4A3Q01955 1670 aa14.22□□□□□ -0.13
SMC4-201ENST00000344722 A0A1B0GXF2 115 aa14.22□□□□□ -0.13
SMC4-201ENST00000344722 TTTY13Q9BZ97 58 aa14.22□□□□□ -0.13
SMC4-201ENST00000344722 E7EQL1 145 aa14.22□□□□□ -0.13
SMC4-201ENST00000344722 H3BUX3 64 aa14.22□□□□□ -0.13
SMC4-201ENST00000344722 NDUFA4O00483 81 aa14.22□□□□□ -0.13
SMC4-201ENST00000344722 SAA4P35542 130 aa14.22□□□□□ -0.13
SMC4-201ENST00000344722 SS18Q15532 418 aa14.22□□□□□ -0.13
SMC4-201ENST00000344722 TRBV6-1A0A0K0K1D8 114 aa14.22□□□□□ -0.13
SMC4-201ENST00000344722 J3KT08 172 aa14.22□□□□□ -0.13
SMC4-201ENST00000344722 SYNJ2BPP57105 145 aa14.22□□□□□ -0.13
SMC4-201ENST00000344722 AGPAT4-IT1Q9H0P7 198 aa14.22□□□□□ -0.13
SMC4-201ENST00000344722 HERVK_113P63121 156 aa14.21□□□□□ -0.13
SMC4-201ENST00000344722 BAALC-AS2P0C853 105 aa14.21□□□□□ -0.13
SMC4-201ENST00000344722 ODF1Q14990 250 aa14.21□□□□□ -0.14
SMC4-201ENST00000344722 MSRB2Q9Y3D2 182 aa14.2□□□□□ -0.14
SMC4-201ENST00000344722 PI4KAP42356 2102 aa14.2□□□□□ -0.14
SMC4-201ENST00000344722 KLK9Q9UKQ9 250 aa14.2□□□□□ -0.14
SMC4-201ENST00000344722 A0A1W2PRX2 142 aa14.2□□□□□ -0.14
SMC4-201ENST00000344722 C19orf71A6NCJ1 209 aa14.2□□□□□ -0.14
SMC4-201ENST00000344722 UBE2E1P51965 193 aa14.2□□□□□ -0.14
SMC4-201ENST00000344722 A4D1N5 150 aa14.19□□□□□ -0.14
SMC4-201ENST00000344722 KNCNA6PVL3 124 aa14.19□□□□□ -0.14
SMC4-201ENST00000344722 FER1L5A0AVI2 2057 aa14.19□□□□□ -0.14
SMC4-201ENST00000344722 E9PLD3 99 aa14.19□□□□□ -0.14
SMC4-201ENST00000344722 ATOX1O00244 68 aa14.19□□□□□ -0.14
SMC4-201ENST00000344722 SPINK13Q1W4C9 94 aa14.19□□□□□ -0.14
SMC4-201ENST00000344722 RPL32P62910 135 aaKnown RBP14.19□□□□□ -0.14
SMC4-201ENST00000344722 PIP4P2Q8N4L2 257 aa14.19□□□□□ -0.14
SMC4-201ENST00000344722 ICOSQ9Y6W8 199 aa14.19□□□□□ -0.14
SMC4-201ENST00000344722 C22orf46C9J442 243 aa14.19□□□□□ -0.14
SMC4-201ENST00000344722 INS-IGF2F8WCM5 200 aa14.18□□□□□ -0.14
SMC4-201ENST00000344722 HTN3P15516 51 aa14.18□□□□□ -0.14
SMC4-201ENST00000344722 MUSTN1Q8IVN3 82 aa14.18□□□□□ -0.14
SMC4-201ENST00000344722 P0C879 139 aa14.18□□□□□ -0.14
SMC4-201ENST00000344722 TP53TG3Q9ULZ0 132 aa14.18□□□□□ -0.14
SMC4-201ENST00000344722 MSRB1Q9NZV6 116 aa14.18□□□□□ -0.14
SMC4-201ENST00000344722 KAAG1Q9UBP8 84 aa14.18□□□□□ -0.14
SMC4-201ENST00000344722 A0A0B4J2C4 111 aa14.18□□□□□ -0.14
SMC4-201ENST00000344722 LY6G6EA0A0G2JKS1 128 aa14.18□□□□□ -0.14
SMC4-201ENST00000344722 U3KQA8 63 aa14.18□□□□□ -0.14
SMC4-201ENST00000344722 FAM236AA0A1B0GUQ0 79 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms