RNA–Protein interactions for RNA: ENST00000344140.5

CACNB1-201, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene CACNB1, Length 1,889 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-201ENST00000344140 HIGD1CA8MV81 97 aa16.47■□□□□ 0.23
CACNB1-201ENST00000344140 EBLN2Q6P2I7 272 aa16.47■□□□□ 0.23
CACNB1-201ENST00000344140 WNK1Q9H4A3 2382 aa16.47■□□□□ 0.23
CACNB1-201ENST00000344140 TMEM189A5PLL7 270 aa16.46■□□□□ 0.23
CACNB1-201ENST00000344140 NUP35Q8NFH5 326 aa16.46■□□□□ 0.23
CACNB1-201ENST00000344140 FAM19A4Q96LR4 140 aa16.46■□□□□ 0.23
CACNB1-201ENST00000344140 A0A0J9YX75 114 aa16.46■□□□□ 0.22
CACNB1-201ENST00000344140 PF4P02776 101 aa16.46■□□□□ 0.22
CACNB1-201ENST00000344140 RPS20P60866 119 aaKnown RBP16.46■□□□□ 0.22
CACNB1-201ENST00000344140 FOXI2Q6ZQN5 318 aa16.46■□□□□ 0.22
CACNB1-201ENST00000344140 TMEM158Q8WZ71 300 aa16.46■□□□□ 0.22
CACNB1-201ENST00000344140 TRGC2P03986 189 aa16.45■□□□□ 0.22
CACNB1-201ENST00000344140 SAV1Q9H4B6 383 aaPredicted RBP16.45■□□□□ 0.22
CACNB1-201ENST00000344140 DUSP14O95147 198 aaKnown RBP16.44■□□□□ 0.22
CACNB1-201ENST00000344140 CRISP2P16562 243 aa16.44■□□□□ 0.22
CACNB1-201ENST00000344140 FOXA3P55318 350 aaPredicted RBP16.44■□□□□ 0.22
CACNB1-201ENST00000344140 COX19Q49B96 90 aa16.44■□□□□ 0.22
CACNB1-201ENST00000344140 ZFAND2AQ8N6M9 145 aa16.44■□□□□ 0.22
CACNB1-201ENST00000344140 GTSF1Q8WW33 167 aa16.44■□□□□ 0.22
CACNB1-201ENST00000344140 ODF3Q96PU9 254 aa16.44■□□□□ 0.22
CACNB1-201ENST00000344140 CITED1Q99966 193 aa16.44■□□□□ 0.22
CACNB1-201ENST00000344140 SAP30O75446 220 aa16.44■□□□□ 0.22
CACNB1-201ENST00000344140 Q6AWC8 147 aa16.43■□□□□ 0.22
CACNB1-201ENST00000344140 SPINK4O60575 86 aa16.42■□□□□ 0.22
CACNB1-201ENST00000344140 GDF5OSQ5U4N7 250 aa16.42■□□□□ 0.22
CACNB1-201ENST00000344140 RASL11AQ6T310 242 aa16.42■□□□□ 0.22
CACNB1-201ENST00000344140 ATP5L2Q7Z4Y8 100 aa16.42■□□□□ 0.22
CACNB1-201ENST00000344140 APRG1Q8IVJ8 170 aa16.42■□□□□ 0.22
CACNB1-201ENST00000344140 ORM1P02763 201 aa16.42■□□□□ 0.22
CACNB1-201ENST00000344140 GPX1P07203 203 aa16.42■□□□□ 0.22
CACNB1-201ENST00000344140 GZMBP10144 247 aa16.42■□□□□ 0.22
CACNB1-201ENST00000344140 CD33P20138 364 aa16.42■□□□□ 0.22
CACNB1-201ENST00000344140 DEFB131AP59861 70 aa16.42■□□□□ 0.22
CACNB1-201ENST00000344140 LINC01559Q495D7 138 aa16.42■□□□□ 0.22
CACNB1-201ENST00000344140 WDR73Q6P4I2 378 aa16.42■□□□□ 0.22
CACNB1-201ENST00000344140 ZFP82Q8N141 532 aa16.42■□□□□ 0.22
CACNB1-201ENST00000344140 LINC00482Q8N8I6 264 aa16.42■□□□□ 0.22
CACNB1-201ENST00000344140 OR2K2Q8NGT1 345 aa16.42■□□□□ 0.22
CACNB1-201ENST00000344140 ZNF256Q9Y2P7 627 aaPredicted RBP16.42■□□□□ 0.22
CACNB1-201ENST00000344140 MRPL54Q6P161 138 aaKnown RBP16.41■□□□□ 0.22
CACNB1-201ENST00000344140 GNB1LQ9BYB4 327 aa16.41■□□□□ 0.22
CACNB1-201ENST00000344140 ACTL10Q5JWF8 245 aa16.4■□□□□ 0.22
CACNB1-201ENST00000344140 PGLYRP4Q96LB8 373 aa16.4■□□□□ 0.22
CACNB1-201ENST00000344140 TRAPPC1Q9Y5R8 145 aa16.4■□□□□ 0.22
CACNB1-201ENST00000344140 ATRQ13535 2644 aa16.4■□□□□ 0.22
CACNB1-201ENST00000344140 TRAV21A0A0B4J279 112 aa16.39■□□□□ 0.22
CACNB1-201ENST00000344140 IGLV1-51P01701 117 aa16.39■□□□□ 0.22
CACNB1-201ENST00000344140 LEPP41159 167 aa16.39■□□□□ 0.22
CACNB1-201ENST00000344140 PRR9Q5T870 116 aa16.39■□□□□ 0.22
CACNB1-201ENST00000344140 MAP6D1Q9H9H5 199 aa16.39■□□□□ 0.22
CACNB1-201ENST00000344140 TMSB15BA0A087X1C1 80 aa16.39■□□□□ 0.21
CACNB1-201ENST00000344140 KLLNB2CW77 178 aa16.39■□□□□ 0.21
CACNB1-201ENST00000344140 PHOX2AO14813 284 aa16.39■□□□□ 0.21
CACNB1-201ENST00000344140 MT-ND6P03923 174 aa16.39■□□□□ 0.21
CACNB1-201ENST00000344140 RIPPLY3P57055 190 aa16.39■□□□□ 0.21
CACNB1-201ENST00000344140 TSPOP30536 169 aa16.38■□□□□ 0.21
CACNB1-201ENST00000344140 HLA-DRB4P13762 266 aa16.37■□□□□ 0.21
CACNB1-201ENST00000344140 HLA-DRB4X5D2U9 266 aa16.37■□□□□ 0.21
CACNB1-201ENST00000344140 SORL1Q92673 2214 aa16.37■□□□□ 0.21
CACNB1-201ENST00000344140 SNURFLB1AK76 121 aa16.37■□□□□ 0.21
CACNB1-201ENST00000344140 J3KRW8 73 aa16.37■□□□□ 0.21
CACNB1-201ENST00000344140 RNASE4P34096 147 aaKnown RBP16.37■□□□□ 0.21
CACNB1-201ENST00000344140 FABP9Q0Z7S8 132 aa16.37■□□□□ 0.21
CACNB1-201ENST00000344140 FRZBQ92765 325 aa16.37■□□□□ 0.21
CACNB1-201ENST00000344140 A0A1B0GXF2 115 aa16.36■□□□□ 0.21
CACNB1-201ENST00000344140 FRMD6-AS1P0C7T7 363 aa16.36■□□□□ 0.21
CACNB1-201ENST00000344140 CMC4P56277 68 aaPredicted RBP16.36■□□□□ 0.21
CACNB1-201ENST00000344140 HBBP68871 147 aa16.36■□□□□ 0.21
CACNB1-201ENST00000344140 IGKV3D-20A0A0C4DH25 116 aa16.35■□□□□ 0.21
CACNB1-201ENST00000344140 A0A1B0GUT8 65 aa16.35■□□□□ 0.21
CACNB1-201ENST00000344140 HLA-DQA1P01909 254 aa16.35■□□□□ 0.21
CACNB1-201ENST00000344140 TMEM136Q6ZRR5 245 aa16.35■□□□□ 0.21
CACNB1-201ENST00000344140 BORCS7Q96B45 105 aa16.35■□□□□ 0.21
CACNB1-201ENST00000344140 C11orf21Q9P2W6 132 aa16.35■□□□□ 0.21
CACNB1-201ENST00000344140 KNCNA6PVL3 124 aa16.35■□□□□ 0.21
CACNB1-201ENST00000344140 A8MTW9 85 aa16.35■□□□□ 0.21
CACNB1-201ENST00000344140 RAB4BP61018 213 aa16.35■□□□□ 0.21
CACNB1-201ENST00000344140 C12orf54Q6X4T0 127 aa16.35■□□□□ 0.21
CACNB1-201ENST00000344140 FER1L6-AS1Q8NA97 138 aa16.35■□□□□ 0.21
CACNB1-201ENST00000344140 H3BMM0 161 aa16.34■□□□□ 0.21
CACNB1-201ENST00000344140 HIST1H2BKO60814 126 aa16.34■□□□□ 0.21
CACNB1-201ENST00000344140 IGKV3-20P01619 116 aa16.34■□□□□ 0.21
CACNB1-201ENST00000344140 HIST1H2BJP06899 126 aa16.34■□□□□ 0.21
CACNB1-201ENST00000344140 TRGC1P0CF51 173 aa16.34■□□□□ 0.21
CACNB1-201ENST00000344140 HIST1H2BOP23527 126 aa16.34■□□□□ 0.21
CACNB1-201ENST00000344140 HIST1H2BBP33778 126 aa16.34■□□□□ 0.21
CACNB1-201ENST00000344140 HIST1H2BDP58876 126 aa16.34■□□□□ 0.21
CACNB1-201ENST00000344140 HIST1H2BCP62807 126 aa16.34■□□□□ 0.21
CACNB1-201ENST00000344140 RIGQ13278 110 aa16.34■□□□□ 0.21
CACNB1-201ENST00000344140 HIST2H2BEQ16778 126 aa16.34■□□□□ 0.21
CACNB1-201ENST00000344140 HIST2H2BFQ5QNW6 126 aaPredicted RBP16.34■□□□□ 0.21
CACNB1-201ENST00000344140 ZNF575Q86XF7 245 aa16.34■□□□□ 0.21
CACNB1-201ENST00000344140 HIST1H2BHQ93079 126 aa16.34■□□□□ 0.21
CACNB1-201ENST00000344140 HIST1H2BNQ99877 126 aa16.34■□□□□ 0.21
CACNB1-201ENST00000344140 HIST1H2BMQ99879 126 aa16.34■□□□□ 0.21
CACNB1-201ENST00000344140 TPPP3Q9BW30 176 aa16.34■□□□□ 0.21
CACNB1-201ENST00000344140 MRPL18Q9H0U6 180 aaKnown RBP16.34■□□□□ 0.21
CACNB1-201ENST00000344140 A0A1B0GW15 77 aa16.33■□□□□ 0.21
CACNB1-201ENST00000344140 S100A6P06703 90 aa16.33■□□□□ 0.21
CACNB1-201ENST00000344140 IGLC6P0CF74 106 aa16.33■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 337.4 ms