RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 CT83Q5H943 113 aa11.2□□□□□ -0.62
CXCL12-201ENST00000343575 SMIM15Q7Z3B0 74 aa11.2□□□□□ -0.62
CXCL12-201ENST00000343575 GPHB5Q86YW7 130 aa11.2□□□□□ -0.62
CXCL12-201ENST00000343575 C4orf3Q8WVX3 66 aa11.2□□□□□ -0.62
CXCL12-201ENST00000343575 TMEM190Q8WZ59 177 aa11.2□□□□□ -0.62
CXCL12-201ENST00000343575 C17orf77Q96MU5 243 aa11.2□□□□□ -0.62
CXCL12-201ENST00000343575 RABAC1Q9UI14 185 aa11.2□□□□□ -0.62
CXCL12-201ENST00000343575 HSBP1L1C9JCN9 74 aa11.19□□□□□ -0.62
CXCL12-201ENST00000343575 EBLN2Q6P2I7 272 aa11.19□□□□□ -0.62
CXCL12-201ENST00000343575 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.19□□□□□ -0.62
CXCL12-201ENST00000343575 NUP35Q8NFH5 326 aa11.19□□□□□ -0.62
CXCL12-201ENST00000343575 WFDC12Q8WWY7 111 aa11.19□□□□□ -0.62
CXCL12-201ENST00000343575 PAXXQ9BUH6 204 aa11.19□□□□□ -0.62
CXCL12-201ENST00000343575 IGHV3OR16-13A0A075B7E8 117 aa11.19□□□□□ -0.62
CXCL12-201ENST00000343575 IGHV3-74A0A0B4J1X5 117 aa11.19□□□□□ -0.62
CXCL12-201ENST00000343575 EDN2P20800 178 aa11.19□□□□□ -0.62
CXCL12-201ENST00000343575 UBE2L3P68036 154 aaKnown RBP11.19□□□□□ -0.62
CXCL12-201ENST00000343575 VAMP3Q15836 100 aa11.19□□□□□ -0.62
CXCL12-201ENST00000343575 RNASEKQ6P5S7 137 aaKnown RBP11.19□□□□□ -0.62
CXCL12-201ENST00000343575 NHLRC2Q8NBF2 726 aa11.19□□□□□ -0.62
CXCL12-201ENST00000343575 STXBP6Q8NFX7 210 aa11.19□□□□□ -0.62
CXCL12-201ENST00000343575 DUX3Q96PT4 197 aa11.19□□□□□ -0.62
CXCL12-201ENST00000343575 TMEM191AQ9H0A3 160 aa11.19□□□□□ -0.62
CXCL12-201ENST00000343575 MS4A6AQ9H2W1 248 aa11.19□□□□□ -0.62
CXCL12-201ENST00000343575 TMEM14CQ9P0S9 112 aa11.19□□□□□ -0.62
CXCL12-201ENST00000343575 IGHV3-49A0A0A0MS15 119 aa11.18□□□□□ -0.62
CXCL12-201ENST00000343575 A0A1B0GXF2 115 aa11.18□□□□□ -0.62
CXCL12-201ENST00000343575 ADARB2-AS1A8MUL3 147 aa11.18□□□□□ -0.62
CXCL12-201ENST00000343575 PEX7O00628 323 aa11.18□□□□□ -0.62
CXCL12-201ENST00000343575 HOXD3P31249 432 aaPredicted RBP11.18□□□□□ -0.62
CXCL12-201ENST00000343575 TM4SF20Q53R12 229 aa11.18□□□□□ -0.62
CXCL12-201ENST00000343575 KHDC1LQ5JSQ8 128 aa11.18□□□□□ -0.62
CXCL12-201ENST00000343575 LCN12Q6JVE5 192 aa11.18□□□□□ -0.62
CXCL12-201ENST00000343575 KLHL30-AS1Q8NEE0 82 aa11.18□□□□□ -0.62
CXCL12-201ENST00000343575 NUDT10Q8NFP7 164 aa11.18□□□□□ -0.62
CXCL12-201ENST00000343575 NUDT11Q96G61 164 aa11.18□□□□□ -0.62
CXCL12-201ENST00000343575 PMCHL2Q9BQD1 86 aa11.18□□□□□ -0.62
CXCL12-201ENST00000343575 SMAD5-AS1Q9Y6J3 95 aa11.18□□□□□ -0.62
CXCL12-201ENST00000343575 IGHV3-66A0A0C4DH42 116 aa11.17□□□□□ -0.62
CXCL12-201ENST00000343575 SLC25A34Q6PIV7 304 aa11.17□□□□□ -0.62
CXCL12-201ENST00000343575 C8orf86Q6ZUL3 223 aa11.17□□□□□ -0.62
CXCL12-201ENST00000343575 ATOH7Q8N100 152 aa11.17□□□□□ -0.62
CXCL12-201ENST00000343575 OR11H1Q8NG94 326 aa11.17□□□□□ -0.62
CXCL12-201ENST00000343575 FAM231BA6NCW3 169 aa11.17□□□□□ -0.62
CXCL12-201ENST00000343575 OR4C46A6NHA9 309 aa11.17□□□□□ -0.62
CXCL12-201ENST00000343575 H3BTX0 84 aa11.17□□□□□ -0.62
CXCL12-201ENST00000343575 HBBP68871 147 aa11.17□□□□□ -0.62
CXCL12-201ENST00000343575 METTL26Q96S19 204 aa11.17□□□□□ -0.62
CXCL12-201ENST00000343575 A0A1W2PRX2 142 aa11.16□□□□□ -0.62
CXCL12-201ENST00000343575 A8MWL6 223 aa11.16□□□□□ -0.62
CXCL12-201ENST00000343575 NBEAP1P0C6P0 100 aa11.16□□□□□ -0.62
CXCL12-201ENST00000343575 SLURP1P55000 103 aa11.16□□□□□ -0.62
CXCL12-201ENST00000343575 BPIFA4PQ86YQ2 179 aa11.16□□□□□ -0.62
CXCL12-201ENST00000343575 DEFB125Q8N687 156 aa11.16□□□□□ -0.62
CXCL12-201ENST00000343575 RAX2Q96IS3 184 aa11.16□□□□□ -0.62
CXCL12-201ENST00000343575 GFRA4Q9GZZ7 299 aa11.16□□□□□ -0.62
CXCL12-201ENST00000343575 TSSC4Q9Y5U2 329 aaPredicted RBP11.16□□□□□ -0.62
CXCL12-201ENST00000343575 TMEM213A2RRL7 107 aa11.15□□□□□ -0.62
CXCL12-201ENST00000343575 HIGD1CA8MV81 97 aa11.15□□□□□ -0.62
CXCL12-201ENST00000343575 MYCNOSP40205 109 aa11.15□□□□□ -0.62
CXCL12-201ENST00000343575 SYNJ2BPP57105 145 aa11.15□□□□□ -0.62
CXCL12-201ENST00000343575 FAM106AQ4KMX7 169 aa11.15□□□□□ -0.62
CXCL12-201ENST00000343575 OR1N2Q8NGR9 330 aa11.15□□□□□ -0.62
CXCL12-201ENST00000343575 DAZ1Q9NQZ3 744 aaKnown RBP11.15□□□□□ -0.62
CXCL12-201ENST00000343575 ZNF492Q9P255 531 aa11.15□□□□□ -0.62
CXCL12-201ENST00000343575 KLF12Q9Y4X4 402 aa11.15□□□□□ -0.62
CXCL12-201ENST00000343575 LINC01619G3V211 115 aa11.15□□□□□ -0.63
CXCL12-201ENST00000343575 SYS1-DBNDD2H3BUS1 97 aa11.15□□□□□ -0.63
CXCL12-201ENST00000343575 K7EMT4 169 aa11.15□□□□□ -0.63
CXCL12-201ENST00000343575 LGALS9O00182 355 aa11.15□□□□□ -0.63
CXCL12-201ENST00000343575 FHL3Q13643 280 aa11.15□□□□□ -0.63
CXCL12-201ENST00000343575 MAJINQ3KP22 176 aa11.15□□□□□ -0.63
CXCL12-201ENST00000343575 GDF5OSQ5U4N7 250 aa11.15□□□□□ -0.63
CXCL12-201ENST00000343575 PRIMA1Q86XR5 153 aa11.15□□□□□ -0.63
CXCL12-201ENST00000343575 BLNKQ8WV28 456 aa11.15□□□□□ -0.63
CXCL12-201ENST00000343575 GLMPQ8WWB7 406 aa11.15□□□□□ -0.63
CXCL12-201ENST00000343575 TRBV19A0A075B6N1 114 aa11.14□□□□□ -0.63
CXCL12-201ENST00000343575 C16orf54Q6UWD8 224 aa11.14□□□□□ -0.63
CXCL12-201ENST00000343575 S100A7AQ86SG5 101 aa11.14□□□□□ -0.63
CXCL12-201ENST00000343575 HSPB8Q9UJY1 196 aa11.14□□□□□ -0.63
CXCL12-201ENST00000343575 ATRQ13535 2644 aa11.13□□□□□ -0.63
CXCL12-201ENST00000343575 IGHV7-4-1A0A0J9YVY3 117 aa11.13□□□□□ -0.63
CXCL12-201ENST00000343575 TAX1BP3O14907 124 aa11.13□□□□□ -0.63
CXCL12-201ENST00000343575 LEPROTL1O95214 131 aa11.13□□□□□ -0.63
CXCL12-201ENST00000343575 CA1P00915 261 aaPredicted RBP11.13□□□□□ -0.63
CXCL12-201ENST00000343575 RPL7P18124 248 aaKnown RBP11.13□□□□□ -0.63
CXCL12-201ENST00000343575 BVES-AS1Q5T3Y7 98 aa11.13□□□□□ -0.63
CXCL12-201ENST00000343575 ADAMTSL5Q6ZMM2 481 aa11.13□□□□□ -0.63
CXCL12-201ENST00000343575 DLX4Q92988 240 aaPredicted RBP11.13□□□□□ -0.63
CXCL12-201ENST00000343575 GPR82Q96P67 336 aa11.13□□□□□ -0.63
CXCL12-201ENST00000343575 NDFIP1Q9BT67 221 aa11.13□□□□□ -0.63
CXCL12-201ENST00000343575 MAP1LC3CQ9BXW4 147 aa11.13□□□□□ -0.63
CXCL12-201ENST00000343575 RPP21Q9H633 154 aaKnown RBP11.13□□□□□ -0.63
CXCL12-201ENST00000343575 SMPXQ9UHP9 88 aa11.13□□□□□ -0.63
CXCL12-201ENST00000343575 K7ERU9 68 aa11.12□□□□□ -0.63
CXCL12-201ENST00000343575 CHEK1O14757 476 aa11.12□□□□□ -0.63
CXCL12-201ENST00000343575 HIST1H1AQ02539 215 aaPredicted RBP11.12□□□□□ -0.63
CXCL12-201ENST00000343575 OCIAD2Q56VL3 154 aa11.12□□□□□ -0.63
CXCL12-201ENST00000343575 TENM1Q9UKZ4 2725 aa11.12□□□□□ -0.63
CXCL12-201ENST00000343575 WNK1Q9H4A3 2382 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 118.8 ms