RNA–Protein interactions for RNA: ENST00000341627.5

TNFRSF12A-202, Transcript of TNF receptor superfamily member 12A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF12A, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF12A-202ENST00000341627 PRM2P04554 102 aa11.04□□□□□ -0.64
TNFRSF12A-202ENST00000341627 H2AFB1P0C5Y9 115 aa11.04□□□□□ -0.64
TNFRSF12A-202ENST00000341627 AZU1P20160 251 aa11.04□□□□□ -0.64
TNFRSF12A-202ENST00000341627 FAM222AQ5U5X8 452 aa11.04□□□□□ -0.64
TNFRSF12A-202ENST00000341627 CYB561D1Q8N8Q1 229 aa11.04□□□□□ -0.64
TNFRSF12A-202ENST00000341627 TMEM263Q8WUH6 116 aaKnown RBP11.04□□□□□ -0.64
TNFRSF12A-202ENST00000341627 ATG101Q9BSB4 218 aa11.04□□□□□ -0.64
TNFRSF12A-202ENST00000341627 NDFIP1Q9BT67 221 aa11.04□□□□□ -0.64
TNFRSF12A-202ENST00000341627 TRAV8-1A0A0A6YYK1 113 aa11.03□□□□□ -0.64
TNFRSF12A-202ENST00000341627 ZNF324O75467 553 aaPredicted RBP11.03□□□□□ -0.64
TNFRSF12A-202ENST00000341627 C12orf74Q32Q52 190 aa11.03□□□□□ -0.64
TNFRSF12A-202ENST00000341627 ARL2-SNX15V9GYD0 113 aa11.03□□□□□ -0.64
TNFRSF12A-202ENST00000341627 TRAV10A0A0B4J240 114 aa11.02□□□□□ -0.65
TNFRSF12A-202ENST00000341627 A0A1B0GV50 99 aa11.02□□□□□ -0.65
TNFRSF12A-202ENST00000341627 LYRM9A8MSI8 78 aa11.02□□□□□ -0.65
TNFRSF12A-202ENST00000341627 TEX46H3BTG2 121 aa11.02□□□□□ -0.65
TNFRSF12A-202ENST00000341627 SULT1A2P50226 295 aa11.02□□□□□ -0.65
TNFRSF12A-202ENST00000341627 PPT1P50897 306 aa11.02□□□□□ -0.65
TNFRSF12A-202ENST00000341627 PRR9Q5T870 116 aa11.02□□□□□ -0.65
TNFRSF12A-202ENST00000341627 CST9LP1Q5W188 147 aa11.02□□□□□ -0.65
TNFRSF12A-202ENST00000341627 Q6ZTC4 211 aa11.02□□□□□ -0.65
TNFRSF12A-202ENST00000341627 ZNF767PQ75MW2 155 aa11.02□□□□□ -0.65
TNFRSF12A-202ENST00000341627 RNASE8Q8TDE3 154 aaKnown RBP11.02□□□□□ -0.65
TNFRSF12A-202ENST00000341627 HIST1H2BAQ96A08 127 aa11.02□□□□□ -0.65
TNFRSF12A-202ENST00000341627 LINC00467Q9BRT7 94 aa11.02□□□□□ -0.65
TNFRSF12A-202ENST00000341627 TCEAL7Q9BRU2 100 aa11.02□□□□□ -0.65
TNFRSF12A-202ENST00000341627 TREM1Q9NP99 234 aa11.02□□□□□ -0.65
TNFRSF12A-202ENST00000341627 ALMS1Q8TCU4 4167 aa11.01□□□□□ -0.65
TNFRSF12A-202ENST00000341627 CBY3A6NI87 242 aa11.01□□□□□ -0.65
TNFRSF12A-202ENST00000341627 F6UZH7 168 aa11.01□□□□□ -0.65
TNFRSF12A-202ENST00000341627 RGS13O14921 159 aa11.01□□□□□ -0.65
TNFRSF12A-202ENST00000341627 FLI1Q01543 452 aaPredicted RBP11.01□□□□□ -0.65
TNFRSF12A-202ENST00000341627 EIF4E3Q8N5X7 224 aaKnown RBP11.01□□□□□ -0.65
TNFRSF12A-202ENST00000341627 TMEM75Q8N9X5 138 aa11.01□□□□□ -0.65
TNFRSF12A-202ENST00000341627 ZNF680Q8NEM1 530 aa11.01□□□□□ -0.65
TNFRSF12A-202ENST00000341627 C2CD4CQ8TF44 421 aa11.01□□□□□ -0.65
TNFRSF12A-202ENST00000341627 SGK494Q96LW2 274 aa11.01□□□□□ -0.65
TNFRSF12A-202ENST00000341627 PSG8Q9UQ74 426 aa11.01□□□□□ -0.65
TNFRSF12A-202ENST00000341627 TIMM8BQ9Y5J9 83 aaPredicted RBP11.01□□□□□ -0.65
TNFRSF12A-202ENST00000341627 IGHV1OR15-1A0A075B7D0 117 aa11□□□□□ -0.65
TNFRSF12A-202ENST00000341627 PLAC8L1A1L4L8 177 aa11□□□□□ -0.65
TNFRSF12A-202ENST00000341627 SNURFLB1AK76 121 aa11□□□□□ -0.65
TNFRSF12A-202ENST00000341627 PEX7O00628 323 aa11□□□□□ -0.65
TNFRSF12A-202ENST00000341627 DAD1P61803 113 aa11□□□□□ -0.65
TNFRSF12A-202ENST00000341627 Q6AWC8 147 aa11□□□□□ -0.65
TNFRSF12A-202ENST00000341627 DEFB131BA0A096LNP1 70 aa10.99□□□□□ -0.65
TNFRSF12A-202ENST00000341627 TRAV1-1A0A0B4J248 108 aa10.99□□□□□ -0.65
TNFRSF12A-202ENST00000341627 PAGE4O60829 102 aa10.99□□□□□ -0.65
TNFRSF12A-202ENST00000341627 ANXA2RQ3ZCQ2 193 aa10.99□□□□□ -0.65
TNFRSF12A-202ENST00000341627 SAPCD1Q5SSQ6 148 aa10.99□□□□□ -0.65
TNFRSF12A-202ENST00000341627 PRNTQ86SH4 94 aa10.99□□□□□ -0.65
TNFRSF12A-202ENST00000341627 TVP23CQ96ET8 276 aa10.99□□□□□ -0.65
TNFRSF12A-202ENST00000341627 TRAV21A0A0B4J279 112 aa10.98□□□□□ -0.65
TNFRSF12A-202ENST00000341627 IGLV2-11P01706 119 aa10.98□□□□□ -0.65
TNFRSF12A-202ENST00000341627 NKX2-5P52952 324 aaPredicted RBP10.98□□□□□ -0.65
TNFRSF12A-202ENST00000341627 NOP10Q9NPE3 64 aaKnown RBP10.98□□□□□ -0.65
TNFRSF12A-202ENST00000341627 DEFB130BP0DP73 79 aa10.97□□□□□ -0.65
TNFRSF12A-202ENST00000341627 DEFB130AP0DP74 79 aa10.97□□□□□ -0.65
TNFRSF12A-202ENST00000341627 ATP5G3P48201 142 aa10.97□□□□□ -0.65
TNFRSF12A-202ENST00000341627 TCTAP57738 103 aa10.97□□□□□ -0.65
TNFRSF12A-202ENST00000341627 MUC21Q5SSG8 566 aa10.97□□□□□ -0.65
TNFRSF12A-202ENST00000341627 IBA57Q5T440 356 aaKnown RBP10.97□□□□□ -0.65
TNFRSF12A-202ENST00000341627 FAM159AQ6UWV7 190 aa10.97□□□□□ -0.65
TNFRSF12A-202ENST00000341627 MANBALQ9NQG1 85 aa10.97□□□□□ -0.65
TNFRSF12A-202ENST00000341627 EPPK1P58107 5090 aaKnown RBP10.97□□□□□ -0.65
TNFRSF12A-202ENST00000341627 TRAV34A0A0B4J273 112 aa10.96□□□□□ -0.65
TNFRSF12A-202ENST00000341627 IGLL5B9A064 214 aa10.96□□□□□ -0.65
TNFRSF12A-202ENST00000341627 UBE2G1P62253 170 aa10.96□□□□□ -0.65
TNFRSF12A-202ENST00000341627 DAZ2Q13117 558 aaKnown RBP10.96□□□□□ -0.65
TNFRSF12A-202ENST00000341627 SMUG1Q53HV7 270 aa10.96□□□□□ -0.65
TNFRSF12A-202ENST00000341627 Q6ZQT7 251 aa10.96□□□□□ -0.65
TNFRSF12A-202ENST00000341627 FMC1Q96HJ9 113 aa10.96□□□□□ -0.65
TNFRSF12A-202ENST00000341627 LINC00479Q96M42 142 aa10.96□□□□□ -0.65
TNFRSF12A-202ENST00000341627 GNG13Q9P2W3 67 aa10.96□□□□□ -0.65
TNFRSF12A-202ENST00000341627 NAGKQ9UJ70 344 aa10.96□□□□□ -0.65
TNFRSF12A-202ENST00000341627 TRGV11A0A075B6L2 103 aa10.95□□□□□ -0.66
TNFRSF12A-202ENST00000341627 GCGP01275 180 aa10.95□□□□□ -0.66
TNFRSF12A-202ENST00000341627 HTN3P15516 51 aa10.95□□□□□ -0.66
TNFRSF12A-202ENST00000341627 AKR1C3P42330 323 aa10.95□□□□□ -0.66
TNFRSF12A-202ENST00000341627 ZNF415Q09FC8 603 aa10.95□□□□□ -0.66
TNFRSF12A-202ENST00000341627 ALKAL2Q6UX46 152 aa10.95□□□□□ -0.66
TNFRSF12A-202ENST00000341627 Q86TA4 180 aa10.95□□□□□ -0.66
TNFRSF12A-202ENST00000341627 C11orf72Q8NBR9 251 aa10.95□□□□□ -0.66
TNFRSF12A-202ENST00000341627 C8orf49Q96NF6 230 aa10.95□□□□□ -0.66
TNFRSF12A-202ENST00000341627 GSN-AS1Q9NRJ2 163 aa10.95□□□□□ -0.66
TNFRSF12A-202ENST00000341627 IFNA1P01562 189 aa10.94□□□□□ -0.66
TNFRSF12A-202ENST00000341627 TCL1AP56279 114 aa10.94□□□□□ -0.66
TNFRSF12A-202ENST00000341627 CCL20P78556 96 aa10.94□□□□□ -0.66
TNFRSF12A-202ENST00000341627 TDRG1Q3Y452 100 aa10.94□□□□□ -0.66
TNFRSF12A-202ENST00000341627 KCNS1Q96KK3 526 aa10.94□□□□□ -0.66
TNFRSF12A-202ENST00000341627 TXNDC17Q9BRA2 123 aa10.94□□□□□ -0.66
TNFRSF12A-202ENST00000341627 TP53TG3Q9ULZ0 132 aa10.94□□□□□ -0.66
TNFRSF12A-202ENST00000341627 ZFP30Q9Y2G7 519 aa10.94□□□□□ -0.66
TNFRSF12A-202ENST00000341627 BOLA1Q9Y3E2 137 aa10.94□□□□□ -0.66
TNFRSF12A-202ENST00000341627 KLF12Q9Y4X4 402 aa10.94□□□□□ -0.66
TNFRSF12A-202ENST00000341627 IGHV4-4A0A075B6R2 117 aa10.93□□□□□ -0.66
TNFRSF12A-202ENST00000341627 TRBV6-1A0A0K0K1D8 114 aa10.93□□□□□ -0.66
TNFRSF12A-202ENST00000341627 ATP5G1P05496 136 aa10.93□□□□□ -0.66
TNFRSF12A-202ENST00000341627 S100A9P06702 114 aaKnown RBP10.93□□□□□ -0.66
TNFRSF12A-202ENST00000341627 PFN1P07737 140 aaKnown RBP10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 102.5 ms