RNA–Protein interactions for RNA: ENST00000341307.6

RTN3-203, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-203ENST00000341307 LINC01549A6NIU2 74 aa9.29□□□□□ -0.92
RTN3-203ENST00000341307 C15orf61A6NNL5 157 aa9.29□□□□□ -0.92
RTN3-203ENST00000341307 FSTL3O95633 263 aa9.29□□□□□ -0.92
RTN3-203ENST00000341307 PLA2G2AP14555 144 aa9.29□□□□□ -0.92
RTN3-203ENST00000341307 GRNP28799 593 aaKnown RBP9.29□□□□□ -0.92
RTN3-203ENST00000341307 ZNF134P52741 427 aa9.29□□□□□ -0.92
RTN3-203ENST00000341307 FAM19A5Q7Z5A7 132 aaPredicted RBP9.29□□□□□ -0.92
RTN3-203ENST00000341307 OR10J6PQ8NGY7 276 aa9.29□□□□□ -0.92
RTN3-203ENST00000341307 GNG12Q9UBI6 72 aa9.29□□□□□ -0.92
RTN3-203ENST00000341307 PGPA6NDG6 321 aa9.29□□□□□ -0.92
RTN3-203ENST00000341307 SPINT2O43291 252 aa9.29□□□□□ -0.92
RTN3-203ENST00000341307 TGFAP01135 160 aa9.29□□□□□ -0.92
RTN3-203ENST00000341307 GATA4P43694 442 aa9.29□□□□□ -0.92
RTN3-203ENST00000341307 ODF3Q96PU9 254 aa9.29□□□□□ -0.92
RTN3-203ENST00000341307 SIGLEC9Q9Y336 463 aa9.29□□□□□ -0.92
RTN3-203ENST00000341307 CELSR2Q9HCU4 2923 aa9.28□□□□□ -0.92
RTN3-203ENST00000341307 SPTBN1Q01082 2364 aaKnown RBP9.28□□□□□ -0.92
RTN3-203ENST00000341307 NBPF19A0A087WUL8 3843 aa9.28□□□□□ -0.92
RTN3-203ENST00000341307 TRAV8-2A0A0B4J237 113 aa9.28□□□□□ -0.92
RTN3-203ENST00000341307 MYMXA0A1B0GTQ4 84 aa9.28□□□□□ -0.92
RTN3-203ENST00000341307 ZNF785A8K8V0 405 aa9.28□□□□□ -0.92
RTN3-203ENST00000341307 CDSNQ15517 529 aa9.28□□□□□ -0.92
RTN3-203ENST00000341307 PATE2Q6UY27 113 aa9.28□□□□□ -0.92
RTN3-203ENST00000341307 FMC1Q96HJ9 113 aa9.28□□□□□ -0.92
RTN3-203ENST00000341307 CSMD2Q7Z408 3487 aa9.28□□□□□ -0.92
RTN3-203ENST00000341307 PKDREJQ9NTG1 2253 aa9.28□□□□□ -0.92
RTN3-203ENST00000341307 A0A1W2PPI3 338 aa9.28□□□□□ -0.92
RTN3-203ENST00000341307 H3BVH4 76 aa9.28□□□□□ -0.92
RTN3-203ENST00000341307 KIR2DS2P43631 304 aa9.28□□□□□ -0.92
RTN3-203ENST00000341307 ERVK-16P61578 105 aa9.28□□□□□ -0.92
RTN3-203ENST00000341307 ZNF493Q6ZR52 646 aa9.28□□□□□ -0.92
RTN3-203ENST00000341307 LINC01560Q8TB33 94 aa9.28□□□□□ -0.92
RTN3-203ENST00000341307 CITED2Q99967 270 aaPredicted RBP9.28□□□□□ -0.92
RTN3-203ENST00000341307 CHCHD5Q9BSY4 110 aa9.28□□□□□ -0.92
RTN3-203ENST00000341307 C17orf100A8MU93 164 aa9.27□□□□□ -0.93
RTN3-203ENST00000341307 LINC01619G3V211 115 aa9.27□□□□□ -0.93
RTN3-203ENST00000341307 LOXL3P58215 753 aa9.27□□□□□ -0.93
RTN3-203ENST00000341307 RPL39P5Q59GN2 51 aa9.27□□□□□ -0.93
RTN3-203ENST00000341307 C1orf229Q6ZS94 237 aaPredicted RBP9.27□□□□□ -0.93
RTN3-203ENST00000341307 GAFA1Q96PS6 74 aa9.27□□□□□ -0.93
RTN3-203ENST00000341307 VKORC1Q9BQB6 163 aa9.27□□□□□ -0.93
RTN3-203ENST00000341307 UBTD1Q9HAC8 227 aa9.27□□□□□ -0.93
RTN3-203ENST00000341307 DPM2O94777 84 aa9.27□□□□□ -0.93
RTN3-203ENST00000341307 PLAUP00749 431 aa9.27□□□□□ -0.93
RTN3-203ENST00000341307 TNFRSF1AP19438 455 aa9.27□□□□□ -0.93
RTN3-203ENST00000341307 HSPE1P61604 102 aaKnown RBP9.27□□□□□ -0.93
RTN3-203ENST00000341307 MRPL23Q16540 153 aaKnown RBP9.27□□□□□ -0.93
RTN3-203ENST00000341307 C17orf58Q2M2W7 97 aa9.27□□□□□ -0.93
RTN3-203ENST00000341307 AMN1Q8IY45 258 aa9.27□□□□□ -0.93
RTN3-203ENST00000341307 CALYQ9NYX4 217 aa9.27□□□□□ -0.93
RTN3-203ENST00000341307 PRNDQ9UKY0 176 aa9.27□□□□□ -0.93
RTN3-203ENST00000341307 TACC2O95359 2948 aa9.26□□□□□ -0.93
RTN3-203ENST00000341307 LRBAP50851 2863 aa9.26□□□□□ -0.93
RTN3-203ENST00000341307 PDPNQ86YL7 162 aa9.26□□□□□ -0.93
RTN3-203ENST00000341307 ORMDL3Q8N138 153 aa9.26□□□□□ -0.93
RTN3-203ENST00000341307 OR1L4Q8NGR5 311 aa9.26□□□□□ -0.93
RTN3-203ENST00000341307 SRSF12Q8WXF0 261 aaKnown RBP9.26□□□□□ -0.93
RTN3-203ENST00000341307 CCL17Q92583 94 aa9.26□□□□□ -0.93
RTN3-203ENST00000341307 ZNF714Q96N38 554 aa9.26□□□□□ -0.93
RTN3-203ENST00000341307 TMEM14BQ9NUH8 114 aa9.26□□□□□ -0.93
RTN3-203ENST00000341307 HECTD1Q9ULT8 2610 aa9.26□□□□□ -0.93
RTN3-203ENST00000341307 TRAV8-1A0A0A6YYK1 113 aa9.26□□□□□ -0.93
RTN3-203ENST00000341307 TRAV40A0A0B4J280 105 aa9.26□□□□□ -0.93
RTN3-203ENST00000341307 E7EQL1 145 aa9.26□□□□□ -0.93
RTN3-203ENST00000341307 CCL21O00585 134 aa9.26□□□□□ -0.93
RTN3-203ENST00000341307 NPYP01303 97 aa9.26□□□□□ -0.93
RTN3-203ENST00000341307 C15orf53Q8NAA6 179 aa9.26□□□□□ -0.93
RTN3-203ENST00000341307 BAALCQ8WXS3 180 aa9.26□□□□□ -0.93
RTN3-203ENST00000341307 TRGV9Q99603 122 aa9.26□□□□□ -0.93
RTN3-203ENST00000341307 FOXC2Q99958 501 aa9.26□□□□□ -0.93
RTN3-203ENST00000341307 ENY2Q9NPA8 101 aa9.26□□□□□ -0.93
RTN3-203ENST00000341307 ZNRD1Q9P1U0 126 aa9.26□□□□□ -0.93
RTN3-203ENST00000341307 FOXA2Q9Y261 457 aaPredicted RBP9.26□□□□□ -0.93
RTN3-203ENST00000341307 COX7A2P2O60397 106 aa9.25□□□□□ -0.93
RTN3-203ENST00000341307 PRSS1P07477 247 aa9.25□□□□□ -0.93
RTN3-203ENST00000341307 UBE2D1P51668 147 aa9.25□□□□□ -0.93
RTN3-203ENST00000341307 C10orf113Q5VZT2 155 aa9.25□□□□□ -0.93
RTN3-203ENST00000341307 FAM104BQ5XKR9 115 aa9.25□□□□□ -0.93
RTN3-203ENST00000341307 Q86TA4 180 aa9.25□□□□□ -0.93
RTN3-203ENST00000341307 TMEM160Q9NX00 188 aa9.25□□□□□ -0.93
RTN3-203ENST00000341307 USP9YO00507 2555 aaPredicted RBP9.25□□□□□ -0.93
RTN3-203ENST00000341307 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.25□□□□□ -0.93
RTN3-203ENST00000341307 SMKR1H3BMG3 65 aa9.25□□□□□ -0.93
RTN3-203ENST00000341307 TCRAP04437 139 aa9.25□□□□□ -0.93
RTN3-203ENST00000341307 MRPL51Q4U2R6 128 aaKnown RBP9.25□□□□□ -0.93
RTN3-203ENST00000341307 IFI27L2Q9H2X8 130 aa9.25□□□□□ -0.93
RTN3-203ENST00000341307 TMEM213A2RRL7 107 aa9.24□□□□□ -0.93
RTN3-203ENST00000341307 C9JAW5 83 aa9.24□□□□□ -0.93
RTN3-203ENST00000341307 CGB3P0DN86 165 aa9.24□□□□□ -0.93
RTN3-203ENST00000341307 CGB7P0DN87 165 aa9.24□□□□□ -0.93
RTN3-203ENST00000341307 TWIST1Q15672 202 aa9.24□□□□□ -0.93
RTN3-203ENST00000341307 HIGD1AQ9Y241 93 aa9.24□□□□□ -0.93
RTN3-203ENST00000341307 CSMD1Q96PZ7 3565 aa9.24□□□□□ -0.93
RTN3-203ENST00000341307 OOSP1A8MZH6 123 aa9.24□□□□□ -0.93
RTN3-203ENST00000341307 J3QKU1 62 aa9.24□□□□□ -0.93
RTN3-203ENST00000341307 LRRC75A-AS1Q8N1F1 130 aa9.24□□□□□ -0.93
RTN3-203ENST00000341307 TMEM101Q96IK0 257 aa9.24□□□□□ -0.93
RTN3-203ENST00000341307 DOPEY2Q9Y3R5 2298 aa9.23□□□□□ -0.93
RTN3-203ENST00000341307 DSCAML1Q8TD84 2053 aa9.23□□□□□ -0.93
RTN3-203ENST00000341307 RNASE6Q93091 150 aaKnown RBP9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 211 ms